Basic Information

Insect: Anoplolepis gracilipes
Gene Symbol: stc
Assembly: GCA_031304115.1
Location: JAPWJP010002008.1:4098845-4103212[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.5 3.4e+04 -3.7 1.1 15 19 476 480 475 480 0.82

2 13 0.13 3e+03 -0.3 0.1 4 10 509 515 508 516 0.94

3 13 4.1e-06 0.093 14.1 12.1 4 18 526 540 524 541 0.94

4 13 8.5e-09 0.00019 22.6 14.5 1 18 577 594 577 595 0.97

5 13 3.5e-05 0.78 11.1 9.7 1 19 633 651 633 651 0.92

6 13 0.00031 7 8.0 12.6 4 18 698 712 691 713 0.86

7 13 2 4.5e+04 -4.6 1.6 5 10 742 747 742 747 0.90

8 13 0.0083 1.9e+02 3.5 11.3 1 11 753 763 753 775 0.88

9 13 2.3e-09 5.3e-05 24.4 11.6 1 19 780 798 780 798 0.98

10 13 2 4.5e+04 -4.4 0.8 6 10 827 831 827 831 0.89

11 13 1.7 3.9e+04 -3.9 7.3 10 19 845 855 843 855 0.78

12 13 4.9e-06 0.11 13.8 14.4 1 16 891 906 891 917 0.85

13 13 3.2e-05 0.71 11.2 14.7 1 19 923 942 923 942 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.5	3.4e+04	-3.7	1.1	15	19	476	480	475	480	0.82
2	13	0.13	3e+03	-0.3	0.1	4	10	509	515	508	516	0.94
3	13	4.1e-06	0.093	14.1	12.1	4	18	526	540	524	541	0.94
4	13	8.5e-09	0.00019	22.6	14.5	1	18	577	594	577	595	0.97
5	13	3.5e-05	0.78	11.1	9.7	1	19	633	651	633	651	0.92
6	13	0.00031	7	8.0	12.6	4	18	698	712	691	713	0.86
7	13	2	4.5e+04	-4.6	1.6	5	10	742	747	742	747	0.90
8	13	0.0083	1.9e+02	3.5	11.3	1	11	753	763	753	775	0.88
9	13	2.3e-09	5.3e-05	24.4	11.6	1	19	780	798	780	798	0.98
10	13	2	4.5e+04	-4.4	0.8	6	10	827	831	827	831	0.89
11	13	1.7	3.9e+04	-3.9	7.3	10	19	845	855	843	855	0.78
12	13	4.9e-06	0.11	13.8	14.4	1	16	891	906	891	917	0.85
13	13	3.2e-05	0.71	11.2	14.7	1	19	923	942	923	942	0.97

Sequence Information

Coding Sequence: aTGGCCGCCTGGAACGGCTCGTTCCCGGAAGAAGCGAATTACTCTGCCGCGGAAGGCAACTGGACGTACTACGAGAACACGGGGTATCCGCAAAACGTCTCGGCGAGGGGCCACTATCCGGGAGCCAGTGATCGATCAGGGTACGAGCAGAACGGACCGGCCGCTTTCTATCAGCCGTCGAACATGGTGCCTTTAGATAATACTTATCAGGAACACATACTGCCAAGCTCGTCCGTTGCAAGAGGCTCGAATAATGATTCATGTTCCATGAACGGCATCGGTTCGGCTAACGCGCCCTTCCGCGACAATCACAGGCCGAGAGCCAAGGGCGGCAGGACGATCGGCAAGCCTACCATGTCGGAAGGCGATATCATCCGGTCCAGCATAGTGCAAAACTCAAATTTACAAGCTACAGCCAATGAATTCGTGCCAAACAGtattagattaaataagaAGGACAGATTTAGCAAGAAGGACAATTATAATAACGCGACAGGAGGTAGCTTTGATGGGCAGACTTTCAGGCCGAGATCAAATAACAAGTATATGTCTGATAATAGGTACAAGGATGAGAGACGTTATGACAGTAGAAGGGATGTAAATTATAGGCagaaaaattcacaaaacGTACATGTTCCACCAAGATCTAATTACAGGGATACCCAGAGAAGTTGGTACAACGcgagaaattacaataaatttcagaatggcaaatattataatagaagacACCAGTCAGATTCATCATTCGAAGAACAATATGCTGCTGGGAAAGCTCATACATCTACAGCTGAATTCAGTGGTTCGTTCACATTTGACAGCCAAGAAAATAAGACTTCTGCTAAAGAATCTCAAGAAGATGATTCATCTTCAGATGTTGGCAGAAGTAGAGAAGGGACATGTGAGGATAATGATTTGGAGAAAAATGCCTCCTTGAAAGCCCTTGAGACACAACGAAATAATAAACCTAAGCAATTCACTGACCATGCTAATAcgtctaattattataaatacaattataaatataaaaactattataaatacaattcagATGATGTACAGTCTGAACCTGGTGGTAAACACAAAACTGCAATTGCTACAAAGTATATGCATAAAAGAAACAACGAGGTGACAGCAAATCACAAAGAGAAGAATTTGGAGAATTGGAGAGATAGGACAGAAGATAATGAGGCAGCATGTGTACAggcaaaaaatatgaagaaaaaacataaaatagATGATGATGCAAGTCAAAGGGAGAGATTGACGGAGCAATTGAACAGGGGAATATTAGAATGTTTAGTCTGTTATGAGCATGTCAAGCAAAGCGAGTATGTTTGGTCCTGCAGTAATTGTTACCACGTATTGCAtctaaaatgcattaaaaaatggGCGAAATCGTCTCAGAGCGAAAGCAGTTGGAAGTGTCCAGCTTGCCGGGATATTAGTTTTCTTGTACCAGAGGATTATTACTGTTTCtgcggaaagagaaagatgccGGAGTGGAATCGTAGGGACGTGGCGCATTCGTGCGGCGAGATCTGCGGCCGTAATCTGTCCAAGAACAATTGTGTACACAAATGTACCCTGCTCTGCCATCCCGGTTCTTGTCCACAATGCGTGGCGATGGTGACCAAGTATTGCGGCTGCGGAAGAACGTCGAAGATGCTACTATGCAGTGCTCATCAACTATTGCAGTGTGATTCGATATGTGAGAAAAATCTGTCATGCGGCAAGCACACTTGTCAGAGAAAGTGTCATCAGGGAGAATGCGAGTCTTGCGACGAGACCGTGCaacaaacTTGTTTTTGTGGTAAAAAAACTCAGGAGGTACCTTGCCGAGCTAATGTCACAGATACATATTCCTGTAataatatctgtaataaaCCATTGGATTGTGAGAAACATTATTGCCAAAAAGTCTGCCATCTGGAAGCATGCGAGCCTTGCTCTTTGATGCCCGAGAGAGTCACAACATGTTGTTGCGGACAAACGCCATTAacggagaagagagaaagttgCTTGGATCCTGTGCCTATCTGTGACAAAATCTGTTCTAAGCGTCTGAAATGCGGCCAGCCTAGTAATCCACACATCTGCAAAACACCGTGCCATGTCGGTGAATGTCCAGACTGCGATTTGAACACCGATGTCAAGTGTCGATGCGGTAACATGGATCGCGAAATTGCTTGCAAGGACCTGAAGAGTAAAGCCGACGATGCGCGTTGCGAGAAGCGTTGCAAGAAAAAACGATCCTGCGGCAAGCATAACTGCAACCAGCTGTGTTGTATCGACATCGAGCACATTTGCCCGTTGCCGTGTTCGAAGACGTTGAGCTGCGGTCGGCACAAGTGTCAAGAGAGATGTCACATGGGGAGATGTTCGCCTTGTTGGCAAAGTAGCTTCGAAGAGCTATACTGCGAGTGCGGTGCCGAGGTGATCTATCCACCGGTATCATGCGGTACGAGGAGGCCTGTTTGTAATCGGCCATGTTCTCGCGAGCATCCCTGCGATCACGAGGTGCTGCACAACTGTCACAGCGAGCCGGCGTGTCCGCCTTGCAGTGTCTTGACCCAGAGATGGTGCCACGGTAAACACGAGCTCAGAAAGGCTGTGCCGTGCCATGTGAAAGAGATTTCGTGTGGTCTACCGTGCAATAAGCCGCTGACGTGCGGACGACATAAGTGCATCACAATGTGTCATGCCGGGCCATGCGAAAAACCTGGACAACAGTGCGTGCAACCTTGCAGTACGACGAGGGAGTTGTGCGGACATATCTGTGGCTCTCCGTGCCACGAAGGCAAGTGTCCAGACATGCCTTGTAAAGAGATGGTTAAGGTTACATGTCAGTGCGGACATAGGACTATGAGTCGTGTTTGCGCCGATAATGCGCGAGAATATCAACGGATAGCAAGTAATATACTAGCCAGTAAGATGGCCGACATGCAGCTCGGTCATTCTGTTGATCTGGAAGAAGTATTCGGGCAAGGCGCAAAGAAACAGAATCAGCTAAAGACTCTGGAGTGTAACGATGAATGTAAGACCATAGAGAGAAACAGGAGACTCGCGCTGGGATTGCAGATCGCTAATCCCGACTTGAGCGGCAAATTGATGCCCAGATATACTGATTACATGAAACAATGGGCCAAAAAAGATCCACACTTTTGCCAAATGGTCCATGATAAACTGACGGAACTGGTTCAATTGGCGAAAACATCTAAGCAGAAGTATCGAAGTTACTCATTTGACATTATGAATAGGGAAAAGCGTCATTTCGTACATGAGTCATGTCAACATTTTGGTTGTGAGAGTCAAGCGTATGATGAAGAGCCGAAAAGAAATGTCGTCGCCACTGCTGTGAAAGATAAGTGCTGGCTACCAAGTTATAGTTTATTAGAAATGGTACAGCGGGAGAAGGGACAAAGAAAAGTTCCAGGACCAGTACTTAACGCTTCTAAgggaaataattctataaaGACTGTTCTTTCGTTACCCATAAAACAGAGTCAGAAATCACTACCACTGTCATCAACTGCAAAAACAACTGATAAGGagatagattattttaattatcaaggaTGA
Protein Sequence: MAAWNGSFPEEANYSAAEGNWTYYENTGYPQNVSARGHYPGASDRSGYEQNGPAAFYQPSNMVPLDNTYQEHILPSSSVARGSNNDSCSMNGIGSANAPFRDNHRPRAKGGRTIGKPTMSEGDIIRSSIVQNSNLQATANEFVPNSIRLNKKDRFSKKDNYNNATGGSFDGQTFRPRSNNKYMSDNRYKDERRYDSRRDVNYRQKNSQNVHVPPRSNYRDTQRSWYNARNYNKFQNGKYYNRRHQSDSSFEEQYAAGKAHTSTAEFSGSFTFDSQENKTSAKESQEDDSSSDVGRSREGTCEDNDLEKNASLKALETQRNNKPKQFTDHANTSNYYKYNYKYKNYYKYNSDDVQSEPGGKHKTAIATKYMHKRNNEVTANHKEKNLENWRDRTEDNEAACVQAKNMKKKHKIDDDASQRERLTEQLNRGILECLVCYEHVKQSEYVWSCSNCYHVLHLKCIKKWAKSSQSESSWKCPACRDISFLVPEDYYCFCGKRKMPEWNRRDVAHSCGEICGRNLSKNNCVHKCTLLCHPGSCPQCVAMVTKYCGCGRTSKMLLCSAHQLLQCDSICEKNLSCGKHTCQRKCHQGECESCDETVQQTCFCGKKTQEVPCRANVTDTYSCNNICNKPLDCEKHYCQKVCHLEACEPCSLMPERVTTCCCGQTPLTEKRESCLDPVPICDKICSKRLKCGQPSNPHICKTPCHVGECPDCDLNTDVKCRCGNMDREIACKDLKSKADDARCEKRCKKKRSCGKHNCNQLCCIDIEHICPLPCSKTLSCGRHKCQERCHMGRCSPCWQSSFEELYCECGAEVIYPPVSCGTRRPVCNRPCSREHPCDHEVLHNCHSEPACPPCSVLTQRWCHGKHELRKAVPCHVKEISCGLPCNKPLTCGRHKCITMCHAGPCEKPGQQCVQPCSTTRELCGHICGSPCHEGKCPDMPCKEMVKVTCQCGHRTMSRVCADNAREYQRIASNILASKMADMQLGHSVDLEEVFGQGAKKQNQLKTLECNDECKTIERNRRLALGLQIANPDLSGKLMPRYTDYMKQWAKKDPHFCQMVHDKLTELVQLAKTSKQKYRSYSFDIMNREKRHFVHESCQHFGCESQAYDEEPKRNVVATAVKDKCWLPSYSLLEMVQREKGQRKVPGPVLNASKGNNSIKTVLSLPIKQSQKSLPLSSTAKTTDKEIDYFNYQG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00869301;
90% Identity: -
80% Identity: -