Agra008227.1
Basic Information
- Insect
- Anoplolepis gracilipes
- Gene Symbol
- pnr
- Assembly
- GCA_031304115.1
- Location
- JAPWJP010000819.1:199714-206997[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.4 1.2e+04 -2.7 0.1 3 12 228 242 227 244 0.58 2 2 1.2e-16 6.1e-13 49.4 5.1 1 35 417 450 417 451 0.98
Sequence Information
- Coding Sequence
- ATGTTCGATGTACCGCAGAAGTTCTACGAGCTGTGTCGCCTTTGTTTATCCGCGGACGGTGTTAAATCGTCCATATTCGAGGAGGAGGGCATTCAGCGAAAGATATTAGCGTGCCTGTCAATCACGGTAAAAGATGGCGATACCTTACCGTCAATTATCTGCCATcggtgtgtatataaattggaCTTACTGCACAACTTTCGAGAAGTGTCACAAAAGTCTGATATTATACTTAAACAGTACCTGGATTATGCCAAGCAATTGTCATCCCCTGATGAGCAGAAAGAGACTCTCTCCACTGCCAAAGTAGTAGGCGAAAACCCACTACAATCGTTCCTCGAGTTGAATAGGACATTATTCGATGAAGAGTCTAACTCCGAGCCGGCCAGCATTAATCAAAACATAATACCTCAAACTCTAAAGCATCATCTACAGTTGCAAAACAGTGATATGCCAGAACATGATAATATTAAGTGCGAACCAGAAGATGACACATGTTCTAATAGCTCCGATCCTGAACGGCTAGAAATTGAGGATCGTGACGAGCAGGAAATCGAAAGTGAAGAAAATGGTTACGACATGACTGTTAACAAGAGAATTAAACTTGAAGACAATTATGATGGCTCTGAATCCAACACTGCAAATTGTAGTCCAGTTAATAGAATGGATACCCCAGAGAGCAATTGTTCCGATAGTAACATTGATCATGAAACAACGAAGCTGTGGCAAGCTTTAGCTAGTAATAGAAGTTTGGAAATTACACGAACAAATGGTGATAAGTTAAACAATGGATTTACCGGCGAAGCCACAAATTTGCTGCGCTCTTTGATTAATAACAGTCAGATTGGCATTACCGCCATTGACTCGGATAAAATATCTCCGCAAATCAAATTCTATAGGGATACCCAGGGGACAACTATCGAACGTACGCTAACCGATTTTCCTGTGCTTGGTAATCGTACGAATATAGCAACTTTAGAAAATAAGAGTGCCTCGATAGATAGTAATCCATCTAGCCCTGCCAGCATTGGTCGTAAGGAAATAACGACGAAAGGTCGCAGAAAACAAAGCTATCCCAGTAAGGCTCCAGCAAGTCCGGACGTTGTCGCGAATTACCAACATGAATCCAATAATGAAGAGCAAGCTCAGGACTTTACTACATGGTCGAACAAGTTGAAAggaaagctgGACGATCAGAAACAATTCGATCAGCAAAGTGGCAACATTGCAAAAAAGGTCGACATGTCTTGCACAAATTGCGGTACTATGACAACAACCATCTGGAGAAGAAATATGAAGGGCGAGATGGTGTGCAATGCTTGCGGACTGTATTACAAACTTCATGGTGTTAATCGCCCGGTTACTATGCGAAGAGATACTATACATACTCGCAGACGTAGACCCAAAGGTGAAAAGCCAACGAGACACAGAAAAAAAGGGGACGCGGTCTTAGCATCTCAATCAACAACGGAACCAATGGATCCCGAGAGCGCGGACATGCTGGCGGCTCTTCGACGACAAATTCAGCCTCACCTGATGATGGCAGCGTTAACGCCCACACGAATAGCTAGTGGCCATCCGCCTCCGCCTAACCCTTACTCAATACCTTTGTCTAGTTACATGATTCACCCACATGCGAAAACCGAGGAGCGTGTACAGCGGCATCTGTCGATGGATACTGAAGAAACGGATGAAGGCGACGAGGAGAACGTTTCCGATGTTCCTTTGAATTTGGTGGCGACTTCACTTTCAGATGAGACGCACTAA
- Protein Sequence
- MFDVPQKFYELCRLCLSADGVKSSIFEEEGIQRKILACLSITVKDGDTLPSIICHRCVYKLDLLHNFREVSQKSDIILKQYLDYAKQLSSPDEQKETLSTAKVVGENPLQSFLELNRTLFDEESNSEPASINQNIIPQTLKHHLQLQNSDMPEHDNIKCEPEDDTCSNSSDPERLEIEDRDEQEIESEENGYDMTVNKRIKLEDNYDGSESNTANCSPVNRMDTPESNCSDSNIDHETTKLWQALASNRSLEITRTNGDKLNNGFTGEATNLLRSLINNSQIGITAIDSDKISPQIKFYRDTQGTTIERTLTDFPVLGNRTNIATLENKSASIDSNPSSPASIGRKEITTKGRRKQSYPSKAPASPDVVANYQHESNNEEQAQDFTTWSNKLKGKLDDQKQFDQQSGNIAKKVDMSCTNCGTMTTTIWRRNMKGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKPTRHRKKGDAVLASQSTTEPMDPESADMLAALRRQIQPHLMMAALTPTRIASGHPPPPNPYSIPLSSYMIHPHAKTEERVQRHLSMDTEETDEGDEENVSDVPLNLVATSLSDETH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00126375;
- 90% Identity
- iTF_00869291;
- 80% Identity
- -