Agra022433.1
Basic Information
- Insect
- Anoplolepis gracilipes
- Gene Symbol
- grn
- Assembly
- GCA_031304115.1
- Location
- JAPWJP010001703.1:1255543-1257918[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.2e-20 1.6e-16 60.9 4.7 1 35 10 43 10 44 0.98 2 2 4.1 2.1e+04 -3.5 0.2 6 12 126 132 125 132 0.71
Sequence Information
- Coding Sequence
- ATGGGAATCCCGGTAGAGGGTCGCGAGTGCGTGAATTGCGGCGCTACTTCGACACCGCTCTGGAGACGGGACGGCACCGGCCACTACCTCTGCAACGCCTGCGGGCTATATTACAAGATGAACGGTCAGAATCGACCCCTCATCAAGCCGAAACGACGCCTGAATTCGTGTGAACTCGATCTATTTTTGGCGACTCGGCTTGGCACCTATGTAGATGGAGCAGGCTCGTCCGAAGTACCGATGCGGAAACTCGATACCGTCGGCCGGCCCTGCTCTTCCTCCTTCCTTAAGTTGTCGTTTCGGACTCTCCTCCCGGACTGCGATTCGATCTGGCTAAACACTCACGAGAATTCGCGGAATCGATCACGAAACGCGACCGAAACGTCTGCTTTATGGCTTACATTCCCCGTCCCTCCATAA
- Protein Sequence
- MGIPVEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLNSCELDLFLATRLGTYVDGAGSSEVPMRKLDTVGRPCSSSFLKLSFRTLLPDCDSIWLNTHENSRNRSRNATETSALWLTFPVPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -