Basic Information

Insect: Anoplolepis gracilipes
Gene Symbol: -
Assembly: GCA_031304115.1
Location: JAPWJP010000043.1:1180906-1186391[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 29 3.9e-05 0.0071 18.0 0.5 2 23 69 90 68 90 0.96

2 29 0.018 3.2 9.6 3.8 1 23 92 115 92 115 0.96

3 29 0.15 28 6.7 3.4 1 23 120 143 120 143 0.95

4 29 0.00029 0.053 15.3 2.7 1 23 149 172 149 172 0.95

5 29 0.021 3.8 9.4 1.1 3 23 180 201 178 201 0.95

6 29 0.00022 0.041 15.6 0.2 1 23 206 228 206 228 0.97

7 29 1.1e-05 0.002 19.7 0.1 3 23 236 256 234 256 0.97

8 29 5.9e-06 0.0011 20.6 0.1 1 23 262 284 262 284 0.98

9 29 0.00073 0.13 14.0 0.8 1 23 290 312 290 312 0.97

10 29 0.02 3.6 9.5 6.0 1 23 357 380 357 380 0.96

11 29 1.3e-05 0.0023 19.5 0.4 1 23 386 408 386 408 0.97

12 29 0.009 1.6 10.6 3.5 1 23 414 436 414 436 0.97

13 29 0.00043 0.078 14.7 2.6 1 23 442 464 442 464 0.98

14 29 2.7 4.8e+02 2.8 9.4 1 23 470 492 470 493 0.96

15 29 0.003 0.54 12.1 4.1 1 23 509 532 509 532 0.95

16 29 0.46 83 5.2 1.0 3 23 544 564 542 564 0.95

17 29 7.2e-07 0.00013 23.5 2.1 1 23 570 592 570 592 0.99

18 29 1.8e-06 0.00032 22.2 1.6 1 23 598 620 598 620 0.97

19 29 7.1e-08 1.3e-05 26.6 1.0 1 23 626 648 626 648 0.99

20 29 0.53 97 5.0 0.6 3 23 681 702 680 702 0.96

21 29 0.0017 0.31 12.8 0.8 1 23 708 731 708 731 0.96

22 29 0.03 5.5 8.9 0.6 2 23 737 758 736 759 0.94

23 29 7.3e-05 0.013 17.1 0.2 1 23 764 786 764 786 0.98

24 29 0.049 8.8 8.3 0.9 2 23 793 814 792 815 0.94

25 29 0.00023 0.042 15.6 1.2 1 23 834 857 834 857 0.96

26 29 0.00079 0.14 13.9 0.6 1 23 868 890 868 890 0.96

27 29 0.0095 1.7 10.5 3.2 1 23 896 918 896 918 0.94

28 29 9.2e-07 0.00017 23.1 1.1 1 23 924 946 924 946 0.98

29 29 5.8e-05 0.01 17.5 0.1 1 21 952 972 952 973 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	29	3.9e-05	0.0071	18.0	0.5	2	23	69	90	68	90	0.96
2	29	0.018	3.2	9.6	3.8	1	23	92	115	92	115	0.96
3	29	0.15	28	6.7	3.4	1	23	120	143	120	143	0.95
4	29	0.00029	0.053	15.3	2.7	1	23	149	172	149	172	0.95
5	29	0.021	3.8	9.4	1.1	3	23	180	201	178	201	0.95
6	29	0.00022	0.041	15.6	0.2	1	23	206	228	206	228	0.97
7	29	1.1e-05	0.002	19.7	0.1	3	23	236	256	234	256	0.97
8	29	5.9e-06	0.0011	20.6	0.1	1	23	262	284	262	284	0.98
9	29	0.00073	0.13	14.0	0.8	1	23	290	312	290	312	0.97
10	29	0.02	3.6	9.5	6.0	1	23	357	380	357	380	0.96
11	29	1.3e-05	0.0023	19.5	0.4	1	23	386	408	386	408	0.97
12	29	0.009	1.6	10.6	3.5	1	23	414	436	414	436	0.97
13	29	0.00043	0.078	14.7	2.6	1	23	442	464	442	464	0.98
14	29	2.7	4.8e+02	2.8	9.4	1	23	470	492	470	493	0.96
15	29	0.003	0.54	12.1	4.1	1	23	509	532	509	532	0.95
16	29	0.46	83	5.2	1.0	3	23	544	564	542	564	0.95
17	29	7.2e-07	0.00013	23.5	2.1	1	23	570	592	570	592	0.99
18	29	1.8e-06	0.00032	22.2	1.6	1	23	598	620	598	620	0.97
19	29	7.1e-08	1.3e-05	26.6	1.0	1	23	626	648	626	648	0.99
20	29	0.53	97	5.0	0.6	3	23	681	702	680	702	0.96
21	29	0.0017	0.31	12.8	0.8	1	23	708	731	708	731	0.96
22	29	0.03	5.5	8.9	0.6	2	23	737	758	736	759	0.94
23	29	7.3e-05	0.013	17.1	0.2	1	23	764	786	764	786	0.98
24	29	0.049	8.8	8.3	0.9	2	23	793	814	792	815	0.94
25	29	0.00023	0.042	15.6	1.2	1	23	834	857	834	857	0.96
26	29	0.00079	0.14	13.9	0.6	1	23	868	890	868	890	0.96
27	29	0.0095	1.7	10.5	3.2	1	23	896	918	896	918	0.94
28	29	9.2e-07	0.00017	23.1	1.1	1	23	924	946	924	946	0.98
29	29	5.8e-05	0.01	17.5	0.1	1	21	952	972	952	973	0.95

Sequence Information

Coding Sequence: ATGGACATCAATAATTCGGGACACTCGCTCGTCGAAAGCATAGAGTGCACGCCCGAGTATGACTCGCTTCCCATCAGACTCAAACgacatattattagaaaaagaaagctgCCGAAACAGGAGAATCATTGTACGGAAAAAGATGTGAAGAAGCAAAACCATAATCAGAACAAAATCGACAAGAGGAAACCCGAGGTTTTCCTAGAATGTGCCACTTGTGGCAAACGTTTCAGCGACAAACTCACCATAATAAGACACATGCGCCAGCACAAGTACCAGTGTCAAACCTGTTGCCAAAGTTTTAGCTTGAAGCGAGACCTGAAGCGGCACGTCGAGAAGGTTCATGGACCTCTACTCTATCCCTGCAGCATTTGCGAGTATAAGAGCAACAATAGATGCACTCTGAAGGATCATTTCATACGAAAGCACACTAGCGGTTTCCAGCATATCTGTACGGTTTGCAAGAAGCAGTTCAAGATCAAAAACGATTTGAAGCAACATATGAATCAAGTGCACAGCGGCGATCCGCCCATCATTTGTAGCATCTGTGGACACGCATGTAAAAACATGCCTGCTATCAAGGCGCACATGAAGTATCGACACTACAAGCCGGCTTACGAGTGCAAGATATGCAAACGCGGTCTGACTACGCAAGAGAATCTGGATCAGCACCTAATCTGGCACGAACGGAAGGAGAAGGTCATTTGTCCCACATGCGGCAAGACCTTTGGCCAGAAGAGGGACTTGGATCTTCATCTGAGAATCCATCAGGGTATCCGACCATTCTCCTGTCCAGTCTGCGGTAAAACTTTTCCCAGAAAAACCGCGCAAGAGCAACATATATTGATTCACACCGGCAAGAGACCGTATATCTGCGATATCTGCGGGCAAACTTTTGCACAGAAACCAGGTCTTATTTGCCACAGAAAGCGTCATCCTGGACCACTGCCGCCGTTACCTGTAgtatccattaaaaaaataatcatggaCTTTACGCAAGAACTTGGAGTTCCTCTTACGCAGCAGCAAGATAAAATAACGCAACGAAGGGGTAAATCGCGCGCTGTGCATCAATGCGTCAAGTGCGGAGCTTGCTTTCGCCATACGCGAAAACTTGTGGAGCACCTGAAGAATCTACATAATATCGATCGGGCTTTCAGCTGCGACGAGTGCGACAAGACATTTCGCAGCCCGATGAACATAGCACGCCACAAATTGATTCATACCGGGTTGAAGATGTTCATCTGCGATCTCTGCGAGTATAGCACTAATCAAAAGTCCAATCTGGAATGCCATCGTCGCCGACACGCGAAGGATTATAGCTTCAAGTGCGAGATGTGCGACAAGGGTTTCTTCCACAAGACCGAATATCTGGAGCATCAGAACGCGCATACGAATAAGACTCTGTATCGCTGCGAGCACTGTtgcaagtattatttttacaaaaagaatctGTCGGTGCATCTGGTAACGCATCACACGAGCAAACAGACCGGCGTGCTCGCAAAGAACGCGAAGACGAGACACGCGTGCAAATTCTGTCTGGAAAGATTCGTCTACAAGAGACTGTTGAAGAGACACATGAAGAATCAGCACGGATTCACGGAAAACGCTCCGACGAAACACCTGTGCGATCTGTGCGGCGCGGAATTGTCATCGATGAGACGATTAACGGTGCATAAACGTAATCACGTGGGCGAGAAGATCTTCAAATGCGACACGTGCGACAAGAGATTCGTGAGCAAGGAGAACCTGAGTATTCACAAACGAACGCACACAGGTGACAAACCGCACGTGTGTCCGCAATGCGGTAGAAGTTTCACCCAGAGGACCTCGTTGGTTTTACACCTACGATATCACTCGGGTCAGAGGCCTTATCAGTGCTCGGATTGTGACAAGAGTTTCGTGTCCAACGCTTTACTCAAGAGGCATCGCAAAGTGCACGAGAAAACCATCCCATGGACGAATAATCACGATTTGAAAGTGAAGAATGGGGACCTGCCTGACCATGGACAGAAATTCGAAGGTAACGAGAAAATTTGCGAACTGTGTCGAGAGAAATTCCACTTTGTTACGAGATTAGTCGCTCATCTGAGAATAGCGCACGGCATTCATCGACCCTTCAAGTGCATCACTTGTGGCAAGAATTATCCCCAGCAATTCATGCTTAACGCCCACGTGAAGAAATCGCACACGCTGAAAACGGTGCCGTGCAACGAGTGCAATTTCATGGGTGTCAACGCGACCGACGTGGAGAGGCACAGGAAACGTCATCATCGAGCCTCGAAATTCACGTGTGAAATATGCAGCGAGAATTTCGTTGACAAGGACGCTCTCATCACGCACACGACGATGCACAACTTTATGCAATATCAGCAATGCAGCGCGTGTGGTAGCATCTTTAATGACGTGTACAGCTTAAAGGAGCATAATCGTCTACACCACTACGATCCTGCGGTCATGTCGGATGAAAGGATCGAGGAATCCAACGGTTCTGAATACAAATGCGACGTTTGCGATAAGGTTTACAAGTACAAGTCGATTCTGAAGCAGCACAAGATCAAGGCTCACGGGGATCCATCTCTCTATGAGAGACGTAGGTATCTTTGCGCACAGTGTGGCAAGGAACTGAAGACCGCGAAGGGCCTTGAGATTCACCACAGATCGCACACCGGCGAAAAACCGTATACTTGCGAAGTGTGTGGCAAATGTTTCGCTTGTGAGACCTTGCTGAGGACCCACAAGGTTATACATACCGGAGAACGCAAGTACTCGTGCGACCAATGTGGCAAGGCTTTCACGCAGAGGTCCACGTTGGTTGTACACAAGCGATATCACACGGGCGAACGACCGTACATTTGTCCCCGATGCGGTAAGGGTTTCGTCACACGAACTGTTCTTAATACTCATATGAAGTCTTGTCGTTAA
Protein Sequence: MDINNSGHSLVESIECTPEYDSLPIRLKRHIIRKRKLPKQENHCTEKDVKKQNHNQNKIDKRKPEVFLECATCGKRFSDKLTIIRHMRQHKYQCQTCCQSFSLKRDLKRHVEKVHGPLLYPCSICEYKSNNRCTLKDHFIRKHTSGFQHICTVCKKQFKIKNDLKQHMNQVHSGDPPIICSICGHACKNMPAIKAHMKYRHYKPAYECKICKRGLTTQENLDQHLIWHERKEKVICPTCGKTFGQKRDLDLHLRIHQGIRPFSCPVCGKTFPRKTAQEQHILIHTGKRPYICDICGQTFAQKPGLICHRKRHPGPLPPLPVVSIKKIIMDFTQELGVPLTQQQDKITQRRGKSRAVHQCVKCGACFRHTRKLVEHLKNLHNIDRAFSCDECDKTFRSPMNIARHKLIHTGLKMFICDLCEYSTNQKSNLECHRRRHAKDYSFKCEMCDKGFFHKTEYLEHQNAHTNKTLYRCEHCCKYYFYKKNLSVHLVTHHTSKQTGVLAKNAKTRHACKFCLERFVYKRLLKRHMKNQHGFTENAPTKHLCDLCGAELSSMRRLTVHKRNHVGEKIFKCDTCDKRFVSKENLSIHKRTHTGDKPHVCPQCGRSFTQRTSLVLHLRYHSGQRPYQCSDCDKSFVSNALLKRHRKVHEKTIPWTNNHDLKVKNGDLPDHGQKFEGNEKICELCREKFHFVTRLVAHLRIAHGIHRPFKCITCGKNYPQQFMLNAHVKKSHTLKTVPCNECNFMGVNATDVERHRKRHHRASKFTCEICSENFVDKDALITHTTMHNFMQYQQCSACGSIFNDVYSLKEHNRLHHYDPAVMSDERIEESNGSEYKCDVCDKVYKYKSILKQHKIKAHGDPSLYERRRYLCAQCGKELKTAKGLEIHHRSHTGEKPYTCEVCGKCFACETLLRTHKVIHTGERKYSCDQCGKAFTQRSTLVVHKRYHTGERPYICPRCGKGFVTRTVLNTHMKSCR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -