Agra028957.2
Basic Information
- Insect
- Anoplolepis gracilipes
- Gene Symbol
- bab2
- Assembly
- GCA_031304115.1
- Location
- JAPWJP010002103.1:2357699-2365794[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.7e-16 2.3e-12 47.7 0.0 2 42 380 421 379 424 0.94
Sequence Information
- Coding Sequence
- ATGTCTATGCAACAGTATTGTTTGCGCTGGAACAATCATCAACCGAATTTTATCTCGGTTTTctccaatttattaaataacgaGACTTTAGTAGACGTTACTCTTGCTGCAGAAGGCAGGCAAATTCAGGCGCACAAAGTTGTACTGTCAGCATGCAGTACATACTTTCAGTCACTGTTTACAGTGAATCCTTGTCAGCATCCTATCGTTATACTTAAGGACATCAAATTTTCGGACCTCAAGATTATGGTAGATTTTATGTACTATGGAGAAGTAAACATATCTCAAGATCAATTGCCATCTAttataaagaCGGCAGAAAACTTAAAGATAAAAGGACTTGCAGAAATGCATACAGCGTCATTAACTAAATGGCCAAGTGGAAGTAGCGAAACTGGTGGAGCAGATCGTGGCGAATCCTGCTCACCCAGCCCATCTCCATTATCTCCTTCTTTTCGTAGAAAAAGATTACGGAAGTCTTCTACTGGCTCAACATCTGGATCTGGCGACAGGCCGGAAGAAATCAATGAAATAACACTAGTGGCTACTAACATTGTAAAACCTGAACCCTTAATTGCATCGCAAGAAAGTGGAGAGAATATAAGGCGACCGGTAAATACTAGCACAGAATCTCAAGGCAGTATTGATGAAGATCAAATATCAATTATGAGTAATATGGAAACTAGTTCTACCAATACACCAGCCCAGAGTGATGGTTCTATTCAAGACGTGAGTCAACAGTCAACAGGAGGAAACATTGCGCAAAGTTCTGTCTCTTCGCAACCACCCACTCATCAAGGATTACAATGGACTATTATGGAGCACACATATCATCCGACACGTTTCGCTCTGTCCTCGTGTCAAACGAATCTGTCGATCCAAGCGTCGTCGGCGTTCACGACGCCCGAAATAACAGCATCCTCAACCATCAGCGATCAGTACTCTGGTACCAGCACGACTGGTTCCAGTTGCGCCCTGACGAACTATCCAAACTCCTCCCACGGGACGTTGCAGCacgcgtcgtcgtcgtcgggcGGCGGCCCCTCGCCATCGGCGCAGTGCCCGAGTAACTGTCAGAGCCCGTGCGCCAGCCCGCAGACTGCGATTAAGAGGAAACGATCGACTAATCCGCAGGCAGATGAGAACTTTATACGCGCGTTGGACGCCGTACGTTACGGTGGCATAGGGTTTTGCAAGGCGGCGAGGATGTTTGGCGTGAACAACCGAACGCTCTGGCTCGAGTACAAGAAGCGTGGCTACCCGAACAATCGGCCAAGTCTCAAGTCTCGCGTTAAGCAAGAAGTCAACTCctcgccgccgccaccgccgccgtcgCAGCCCCCTCCGGCACAACCCATGAATTCATCGCAGAGCCCAACGCCCATGGGCCCACCCACGACTCCGCACAGCACGCACAACACGCATAGCACGCACACCATGCTGACCAGCCACAGTCCCCACACGATGCTCAGCGGTTACATTGACAGGCATACGGACTATGCGCTACCGAGCACCACGATGCCGATCAATCTGCACGGCACACAAGCAGTAACGAAAAGGACACGGCTACTGATTAGACAACCGCGAGTGAAGAAGGAGCCGAGTCACCTGTCACCGGATGGCGAAGCGAGCTCCTCGCCTCACATTGTCTCGACCTCTGTTCATCTTGCCACGTCGACACTGAATCTACCCCAGACGTCGAGGAGTTTCGAGGAATCGCGTATATCACCACCGCCGCACACCATGCTGGTCAATCAGCCGAATTTGCTGACGGTGACGACGACGTCGTCTAACTTGTTGACGGTACCCCAGCCGTCCTACCTGACCAAACAACACTCACATCCGTTGCTATCCAGTCAGCAACCGAGCACATCCGGGACTTACTGGATACATCGACAGCATTCGCATCCGGAATTGCCCGGCAGGACCACGAGTCCTTCGATAGTGATCGAGCCGGCGCCCATCCTCAAGACGGAAGAAGAGGGAGTCGAGGAGACTTCGACTCCGACTACTTCCTCTGAGCTGGGAACTGGCAGCGGTGGTGCTTCCACTGGATTGAGGGTGAAGACGACGGAGTTGCGGCGGACTTCTTCATCGCCACAGacGAGCTGTAGCAGCAGAGAGTCTCGTGAAAATACGGGGGATCAACGATTAGGTCACTGTCCGGTGTTACGTCAGGGTCCTGCTTTAGGTTGCAATCATTGTTGGAACACGATAGATGATCATGGCAGAATACTCCGTAGGAAGACCAAGTATCACTGTCCCGAATGTCAGATTAATTTGTGCATCGTACCCTGCTTCCAAGAGTATCACGAGCAGCGGCGCGAATTGATTTCCAAATTGAAACCCTTACCAAAAACTAGCTCCGTTTAA
- Protein Sequence
- MSMQQYCLRWNNHQPNFISVFSNLLNNETLVDVTLAAEGRQIQAHKVVLSACSTYFQSLFTVNPCQHPIVILKDIKFSDLKIMVDFMYYGEVNISQDQLPSIIKTAENLKIKGLAEMHTASLTKWPSGSSETGGADRGESCSPSPSPLSPSFRRKRLRKSSTGSTSGSGDRPEEINEITLVATNIVKPEPLIASQESGENIRRPVNTSTESQGSIDEDQISIMSNMETSSTNTPAQSDGSIQDVSQQSTGGNIAQSSVSSQPPTHQGLQWTIMEHTYHPTRFALSSCQTNLSIQASSAFTTPEITASSTISDQYSGTSTTGSSCALTNYPNSSHGTLQHASSSSGGGPSPSAQCPSNCQSPCASPQTAIKRKRSTNPQADENFIRALDAVRYGGIGFCKAARMFGVNNRTLWLEYKKRGYPNNRPSLKSRVKQEVNSSPPPPPPSQPPPAQPMNSSQSPTPMGPPTTPHSTHNTHSTHTMLTSHSPHTMLSGYIDRHTDYALPSTTMPINLHGTQAVTKRTRLLIRQPRVKKEPSHLSPDGEASSSPHIVSTSVHLATSTLNLPQTSRSFEESRISPPPHTMLVNQPNLLTVTTTSSNLLTVPQPSYLTKQHSHPLLSSQQPSTSGTYWIHRQHSHPELPGRTTSPSIVIEPAPILKTEEEGVEETSTPTTSSELGTGSGGASTGLRVKTTELRRTSSSPQTSCSSRESRENTGDQRLGHCPVLRQGPALGCNHCWNTIDDHGRILRRKTKYHCPECQINLCIVPCFQEYHEQRRELISKLKPLPKTSSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01539690;
- 90% Identity
- iTF_01477008;
- 80% Identity
- iTF_00109919;