Agra036108.1
Basic Information
- Insect
- Anoplolepis gracilipes
- Gene Symbol
- lov
- Assembly
- GCA_031304115.1
- Location
- JAPWJP010002701.1:5177469-5183712[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4 1.4e+04 -2.8 0.1 2 20 349 366 348 367 0.75 2 2 3.2e-16 1.1e-12 48.7 0.0 1 44 533 576 533 577 0.95
Sequence Information
- Coding Sequence
- ATGTCGAGCGTCGGGGATAGTCCCGACAGGATGGGTGTTCAATCTCTTTATTCTTTACGATGGAACAATCATCAAGCTCACATACAACAGTTTTTTCAAGAGCTGCTGCATGAAGAGAATCTCGTCGACGTGACCCTGATCTGCGCCGAAAGCAGCGTCAAGGCACACAAAGTCGTTCTCAGCGCCtgcagTCCTTTCTTCCAAAGGATATTCTCGGAGACTCCATGTAAACATCCCGTGGTCGTGCTGAAGGATTTTTCGAATCATGTATTGTCGACGCTGATCGACTTCATGTATGGCGGCGAGGTGAAAATTGCCCAAGAGGAATTACCAGGTTTAATGAAAGCGGCCGAAGTTCTGCAAGTACGCGGTCTATCGTCGTCAGAACGTAGACTTGTGTCGGAAGAACCCAGACCGTTGTCATCCTCGTCGACACTTCCGGAATTTATGCCAGAAGACGCGCGACACGACACTCCGGAGGAGGACGATAGCGCGTTGGAGAACACGAAGGAAATAAAGCCCACGCTGTTTCAACAAACGAGGGACCATCCAACCAAACCGCTCATTGGCCATGTGAACTTTGGCATCCGTGAGACCTGTAATTCGCCCCTGATGCCGCGTCGAAAGCAGGCGCGTCCGCGCCGACGTTCCAGCGAACTGCTGCCGCAGGATCTGAGCAGACGCTCGACTCCGCCGGCTAGCGTGAGTCCAATACCGTCGAGTGGTATTCTTAATCTCAGCGGTAACCAGCACCAAggacagcagcagcaacagcaaccGCAGCTGCATCTACAACAATCTCATTATTCTCAACAAATGATCAACAGAAATGATCAACAACAAATGATCAACGCTCAACAGAATCAACATCAACAGCATCAAGAAGATATGGCGGAGAATCTCTCTATGAAGAAGTCCATATCGCCGAGCGGATTGGATCACCATCATGTGAAAACAGAGGGCAGCGAAGCGACGAGCAGTCCGCGTGGTTCGCCACTTACGGGGACGAGTCTTCTGCATCCGGACAGCTCTATGCACGACATCCCGGCGGCCGTAGCGGCGGCGGTCGCCACCGTGATACCGTCGATGTCTCTGGCGCAAACGCAACCCCCCGAGTACCTGACAAACCTCAGCCATTTGGCGAGCCAATGGCTGCCCGGGCAAAGTCCACTGCCGCCGCCTCCACCACAGAGCCATCATCCACGCGAAGACAGTCCGCACGGGCCCGGTAGATCCCATCCGTATcagcaacaacagcaacaGGAGTCGTCGATAGTATCGCGACGTAGTTCCTTGCCATCCATGTTTCCATTGGACGGCGTGGCTCTCGGCGGCGGACTTTTTTCTCATGCCAGCACGTATGACAGGACAGTTCTCACAGATTCGTTTCTCGCGGATAATTTCAAACCGGAAACATTGCAGAACATTTTTGGTGCTCCAAATCTTGGTCCTCCTCCCACGAAGAAATCGAAAAAACACCGGAACGACAGCGACGGAACACCACGTAGATGGAATGATCACAACAGCCGCTCGCTCGCGGTAAACAGGCCGAAGGGGCAACATAGTGCGCCGCGCGGGGGTCCGCCGAGATCGTGGACAAATAATGAACTTACGTTAGCTCTGCAGCATGTTTGGGAAAAGAAACTCACCACGTCGCAAGCTAGTCGATTGTTCGGGATTCCTTATAACAGTCTACTGATGTATGTGCGCGGCAAATACGGGAAGAGTCTCAAACTGGAGCAACTGCGTAAGAATTGTACCGGCGCCAATATTCCCGAGATTATGAACAACAATAACATCAAGCCCGTCCAACAGTCAGCGCAGATAAGTCATGCGCTCGCAACTCTGTCGTTGCAACATCCAGACAACAGCGGCTACGCTTCTCATCGCTCTCTGATCGGCGGCAACATGACGCAGCCGCAAGGCTTTTATCCCGCCGAGTATGCCGCGTCTTATCCTCTGGGAGTGAATTTAGCACATCTGATGCCTCCGAGCGAACAAAAACCCTTCGAATCCGCGAATTCAAGCGGCGATGGTGGATGTTTAGGAGATGGTAACGGTGGCGGCGATCTGACGAACTCGCAGACCAGCGAAACACCGTCGCCCATAGTcgatcatcatcatcatcaagAGTCGTCGTCATCGACATCGATGCAACCGCAACCGACACAGTCAGCGCCTGCATTGCTGCAACAGAACGGTTCGGATTAG
- Protein Sequence
- MSSVGDSPDRMGVQSLYSLRWNNHQAHIQQFFQELLHEENLVDVTLICAESSVKAHKVVLSACSPFFQRIFSETPCKHPVVVLKDFSNHVLSTLIDFMYGGEVKIAQEELPGLMKAAEVLQVRGLSSSERRLVSEEPRPLSSSSTLPEFMPEDARHDTPEEDDSALENTKEIKPTLFQQTRDHPTKPLIGHVNFGIRETCNSPLMPRRKQARPRRRSSELLPQDLSRRSTPPASVSPIPSSGILNLSGNQHQGQQQQQQPQLHLQQSHYSQQMINRNDQQQMINAQQNQHQQHQEDMAENLSMKKSISPSGLDHHHVKTEGSEATSSPRGSPLTGTSLLHPDSSMHDIPAAVAAAVATVIPSMSLAQTQPPEYLTNLSHLASQWLPGQSPLPPPPPQSHHPREDSPHGPGRSHPYQQQQQQESSIVSRRSSLPSMFPLDGVALGGGLFSHASTYDRTVLTDSFLADNFKPETLQNIFGAPNLGPPPTKKSKKHRNDSDGTPRRWNDHNSRSLAVNRPKGQHSAPRGGPPRSWTNNELTLALQHVWEKKLTTSQASRLFGIPYNSLLMYVRGKYGKSLKLEQLRKNCTGANIPEIMNNNNIKPVQQSAQISHALATLSLQHPDNSGYASHRSLIGGNMTQPQGFYPAEYAASYPLGVNLAHLMPPSEQKPFESANSSGDGGCLGDGNGGGDLTNSQTSETPSPIVDHHHHQESSSSTSMQPQPTQSAPALLQQNGSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00868979;
- 90% Identity
- iTF_00109935;
- 80% Identity
- iTF_00109935;