Azie006365.1
Basic Information
- Insect
- Anopheles ziemanni
- Gene Symbol
- -
- Assembly
- GCA_943734765.2
- Location
- OX030919.2:75895067-75896563[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 6.6e-12 1.3e-08 34.5 0.0 3 38 292 328 291 334 0.89 2 3 0.0028 5.4 6.9 0.0 23 35 361 373 360 380 0.85 3 3 7.2e-12 1.4e-08 34.4 0.0 6 35 404 433 402 435 0.94
Sequence Information
- Coding Sequence
- ATGGCGGTTACAATAAAGTCAGCCATTTCAAGCGTGAAATGGGACAAGTTCGGTGAACACATGCTACGCATCTACACTGGAATCTACGAACATCTACAGTATACAGATTGCGAGCTGATTCTCTCCGATGGCCACCTGCGAGCCAGCCGAATGGTGCTTGGAATGGCTTCatcattttttgaaaacatctTCCAAGCCACAGCTAATCAACCGGTTTCTGGAACGGATCCTTTAAAGGTGATTATTCCCGATGTTACCGTCGGAAGCATGCAGTGTGTTTTGCAGTTCATCTACACGGGAGAGGTTAAACTTCGCGCAGAGGATATGTCCTTGTTTCTTGATGCTTGCTACCTACTGCAAATACGTGGAGTTAATAGTAATGATGGCCGAGTACAGGGGGCGAGCATCGTTGATCAAAGTCCTGCAACGTTTGAACTGTCGGATAATGTTACACAAAAATCTACATCCAGCTCGACCTCGTACCTCATGTCCGTGGTGCATTCGGATGCTGCAGACAGAAGCGTGCTGGAGGTGGAACAAAATCAAGCATTCGGTTCGTCAATTGAGCAGATTGTCTTTCAAGGAACCGTGGTTAGGGAAGTGCATGAAGATTCCTTTCAAAACATCAAGGATCATGCTGTTGAGGACCAATCTTGTGCTGAATATTATGATTTAACCGAAGACGATGGACCACAGCAGGATGGCGCTGACGATGCAACAGATGAGCAACCTTTCGATGAAACGGTAAACCTATCCTGCATTGAAAAGTTTATGACGGACGAACTGGAGGACATGGAAACCGCTAAAGCAGACTCGGGCACGGTGGACAAGGAGTCATGCAAAGACAAGGAATCCACTGCGTTAAGTTACGCTGAACGTTTGGAAAAGGCGGTCGATGCTGTCGTTAACTCTGGCGCTAGTTTTCGGCAAGCAGCGGTGACCTACAATATCCCAAAAACAGTCCTGTGGCGCAAAACGGTGAAAATCGCTCGGCCAGCCAAACCACACCAGTACGAGTTTCCCAGTCCACGGCGTGAAGCGATGGAAGCCATAAAGGCCGGAGAAAAGCTACTGAATGTGAGCCGGCGATTTGACATTCCCATCTCGACACTGCACCGTGACAAGATCCGTTTGTACAGCGAGGGAGAGTTACCGGACACGGTTGCGTTGAAGCAGCGCGATAAGGGCGACACGTTTAAGCAGCGGGTCATCGAGGCCGCACAGAAGTGCCTGTCGGGCAGTATGTCGTTGTCCGAGGCGGCCAGAAAATACTCCCTTCCGAAGACCACCATTTGGAGGAAGATTGGGTTGTTAAAGGAGGAACCTCTACCTGCCAATGAAGGATCGCAGAAACGTGGTCGTGCAAAAGCCGGCGGTAAATCGGGCacaagcaaaagaaattcGAGCGAAAGTTACAACGCAGGTAAAACGAACGTTGATGCGGGTgatgaaacaacaaaatctaAGGTACAACACAACACTTATGTATTTATGTGA
- Protein Sequence
- MAVTIKSAISSVKWDKFGEHMLRIYTGIYEHLQYTDCELILSDGHLRASRMVLGMASSFFENIFQATANQPVSGTDPLKVIIPDVTVGSMQCVLQFIYTGEVKLRAEDMSLFLDACYLLQIRGVNSNDGRVQGASIVDQSPATFELSDNVTQKSTSSSTSYLMSVVHSDAADRSVLEVEQNQAFGSSIEQIVFQGTVVREVHEDSFQNIKDHAVEDQSCAEYYDLTEDDGPQQDGADDATDEQPFDETVNLSCIEKFMTDELEDMETAKADSGTVDKESCKDKESTALSYAERLEKAVDAVVNSGASFRQAAVTYNIPKTVLWRKTVKIARPAKPHQYEFPSPRREAMEAIKAGEKLLNVSRRFDIPISTLHRDKIRLYSEGELPDTVALKQRDKGDTFKQRVIEAAQKCLSGSMSLSEAARKYSLPKTTIWRKIGLLKEEPLPANEGSQKRGRAKAGGKSGTSKRNSSESYNAGKTNVDAGDETTKSKVQHNTYVFM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00096298;
- 90% Identity
- iTF_00096298;
- 80% Identity
- iTF_00096298;