Aste008987.1
Basic Information
- Insect
- Anopheles stephensi
- Gene Symbol
- -
- Assembly
- GCA_013141755.1
- Location
- CM023248.1:30946690-30956813[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.011 0.64 10.4 1.5 2 23 1132 1154 1131 1154 0.94 2 8 0.0014 0.081 13.2 0.2 1 23 1398 1421 1398 1421 0.97 3 8 3.6e-06 0.00021 21.4 0.5 2 23 1428 1449 1428 1449 0.97 4 8 0.00019 0.011 15.9 0.6 1 23 1455 1479 1455 1479 0.99 5 8 2.2e-05 0.0013 18.9 2.6 1 23 1488 1510 1488 1510 0.96 6 8 1.4e-05 0.00081 19.5 0.2 2 23 1521 1542 1520 1542 0.95 7 8 1.2e-07 7.2e-06 26.0 0.3 1 23 1548 1570 1548 1570 0.98 8 8 0.0016 0.089 13.1 0.5 2 20 1578 1596 1577 1598 0.94
Sequence Information
- Coding Sequence
- ATGCCAACGCACTCGTACATCAGCAACGGTATGGCGACTTTGAACTACAGAACACCATCGGCCGCAACGGCACCGACGAATGGTGGTCaggctcatcatcatcatccccatcatcaCCTCCATAATAATCACCATTCCTCGGTTATGCCGAAAAATATGTTCGGAATGTACGGACCCACTGCCAATCTTGGGTCCAACGCAGGTGGTtttcttcagcagcagcagcagcagcagcaacagcaatacCAGCATCAAGTTCAACCACCGCTACATCGTATTCAACAGTCTGCGGCCATGTATGCGCCTCCTCCGGCCGTGCAACAGATGCCTAGCCCGGTAACGACGATGCCGACAAtggtggaggatgatgaggaCGACTTTTTGAGTGAAATCACGGTACAGTTTGATGACGGTGTGCAAACGCTGTACGTGGGTCCAGTGGAAATCATCGACACCAAAGGAGGCGTCGTCAACGATCAGCAGCCTACCAAGCCGGCAATACCTCCAGCAACGTCAATTGTGCGATCGCGCGAACGCTTCCAAGAAGAACGAGCAATCGTAACACTCGAACCAGTTGGCGGCAAGACCAAGAGTCAACCATTACCGATGTacctgcagcaacaacagcagcatcaagagcagcaacagcagcagaaactgCTGcataaacagcaacaaaagcagcagcaaaaacaacagcaaaaacatcAGCAGCTACTCcaactgcaacaacagcaacagcaacagcaacagcgactgcaacaacagcagtatCAGCAGCAACTACGAAAACAAATAtcacaacatcagcagcaacaacagttaACACAGCCGcaaccaccacaacaaaaagCGGGTCAAGTTCAGCAGAAGCCTAGGCTGAAGCAGAGCAAGATGAAATCGCAAAAACAGCAAGAATCCGTACAGCaacgccaacaacaacaaccacagcaACCGCAGCAACCGCAGCATCCACAGCAaccacagcatcagcagaatGAGGCGCAAAGGAGACAACAGATGATACTTAAACAGCAGGCGCTGCTGCAGCAGATGAATCTCATGAAGGCACTATCACCTGAGCAATTGGCACTGTGGCAGCAGCAATCTACGTTCAAATCGCTGAACGATGGCTTACAGCTATCGCATAACGCGCAACTCCAGCacaatcaacagcagcagccttcTCATAGTGCTAGTactagtagcagcagcagtgtaaGTGATTGGCAGCAGACTCAGCAGCAAATACTGTACCAGCAGCAGTTTGCGCTGCGCTTCCAACAACAGATGCAAAACAACCAACAGCTCAAGGTGGCACAGAAGCAACCGCCGGAAAAGTCATTGCCGCCACCGCCAGCAACGCCAGCACGTTCCAAGATGTGTGTGAAGCAAGCGCCGATGCTTAACTTTGCACTGCACAATGTAccatcgagcagcagcagcaatatgAACAACCAGCCGAAAACTGCTACCGATGCTGTAAAACGACCACTGTCATCGGTGGTCGATGGGCGCAGAACGGGTGGAAAACACATGGACCCTCCGGTTACACAACCGGCAGCGAAACGTTCAGCGCTCGTGACCGAAACGACGGGACCCATCGGTGATATTGCCCCGGCGACGGTTTTACGATCTCCACCAACACCGACGCAAATGGTCACCATTAGGGTAGCTACCGAAGCTcaaccacagcagcaacaccaaccGCCCGTTCTGCTGACACAGCTCAAACAAGAACCCATGATCGAGGAGCAATGCGAGCAGAACGTGCTACCGGATGTGGTACCATCgtccccaccaccaccactactgccTCCTACACCAGCGACGCCGCTCGTAGAAGTGAAACCTTCATTAGCTGCCGTAGTAGTGAACGCGGtcgaaccatcatcatcatcggcggCAGATGCTACCATGATGGCTTCCTGCACGGAGAGAACCGTCGCTTCACTAGCGACGGTAATGCTGGCGTCAAACAAACGTACGGACGATAATGTACCAGCGACGGTTGATGATGTACCCGTTTTATCTGTCGCTGAAGTTCCACATGTTCCGAATGGATgtagcaccagcaacagcatcgAAACAGCTCGCGAAAGGCAAAACAGCAAGGATGATGATATTCACAGCCCAATGCCTGTGAACAACGGTACACAGCGGCGGCGGAGTGAAGAGGAGAAAATGCAGGAAATGGCGTCTCCATCACTGCCTGTTACAGTAGCTGTGAATGACGcCCCCGTCGCTGTAAAACGTGGACGTGGACGTCCACCAAAAACATCATATCACAAGCCTGCCCCAACGCCAAATGTAGTGGCGGAATCATCAGCGCCAAAAGAAACTATCAACGATTCTACAACAACGATCGTAGAACAACGTGGTGATGTGGTCAACGATTTGAATGACAGTATTAACATCAACGTCGAATCGCAAGCTTCCGAGGTAAAGAAATCATCTAAGAAGAAAGGATACATATCCGTGGCGGCTCTTTTCGCACCGGCAAAGACTGCCCGAAAGCATCAAAAGTCGTTAAATGTGGCTAAGAAGGAGGAGATCAGCACAATTATAGCAGCAGAACCTGTACCCGTAACAGCTGCAACGATTGAAGAAACAGAGGTAGCAGCTAGTGCAACAGTTGTTACGGTTGCAGCAAACGAACTCGTAGTAGCTGAACATAAGACTGAGCAAATGATATCTACCCCGGCCGTGAGTGTTACAGTGAATGGGCGGGACGATACGGAAGTGAACGGGCTTAGTACCTTACAGGACGAGATTGCCGTACAAAGTCCGCTCCCGGCTGTGGGAAAGGCTACACGCGAAGAAAGCGTTGTcagtggtgatggtggtgaatcGTCCGTGTCGTCTTCGACTGAAGAAGGTTTGAGTAGTGTGGCGAAACAATCGACCCACCTTTTGCTGGCCGGCGTAGTTCCGGACACGGAGAAAGAATCTTCCCCAGCTAGTGATAGTGGGATTGAGTCGGTAACTGAAACGGGCACAATCAATGCGagtaaaaaaagcaaagaacGCTCCAGATCATGTTTGGTGAGCGTTCCGAGTCCGTCGAATCTTGAAGATAAATCTCCGCAGACGAACGATAAACCAGCAGTGAAGGTGGAAAGCGAACAAAAGCCTCGCGCTGTGAGCCGCAGACAGACTATCGCCGCAGCAGACATTATCAAAAACGTCTCTAACGATGAGGAGGAAAATATTGGTCGGAAAGGCAAACGTACCGGGCGTGCTAATCGAACACTGTCCGCAAAAGCAAAGGAAGCGGCTGAGGCAGCTGAGGCTGTTGAGGCGGTCGAAGCGAACGAAGCGGCCGAAGCAGTCGAAGCAGCCGAAGCGGCGGAAAGTGCGTCTAGCGTGTCCGTTTCGAGCCGGGATGAATTAAAGTGTCCCAAGTGCAAAATGCAGTTCAAAACAGAGCTGTGGTACAGAAAGCATTTGCTAAACTATCACGACATCCAGCTGGACCAGAGTATGCAGTTGCTTTTGGATGATGGACCATCGTCGAGAGCCGAAGATGAAACAGATCCCTCTCCTCCTTCGACTGTCGAGGAACCCGAACTACTTGTTCCTGTAAATGGCAGCGTAAAAGGTGACGAGAATTGTGTGGCAAATGGTTTACCGACCGCCGAAGCAATAATCGAAGCAGTTGCCGGTGAAGAGCCACAAAATGATACCGAAATGGAACAGACGTCCGTACCGGTTGAGGTGGTTTCGTCAAAAATCGAGCTGCCCGTTGTCGAATCGAAAATTTCCGGTGGACGCAAAAGGAAATCCACACCTTCTAGTGCCGCAAACGCTTCCTTGGAGGATGTGAGTAACGAGATAACACCGTCGTTGGATGCAACAACGATGCCTAGCAATGGTTCTGTCGCTGCTGAGGAATTACTTCTTCCTGCAGTCACCAACGTGAAGGTGGAGTACCGCACACCCGGTGCACACAGTCGCGATCTGGCGGAAGCTGATGAAGCTGAGGGAAGTGACGAGTTCGGCTCATCGCCACTGCCGAACGCTAGAAATCGTAGTAAGACGTCACGCCGCAAATCGCAAATAGCGACGCCGCCGGTAGTTGAAACCACCACTAAAGTGGAAAAACCGGACCCAGACGATCCGGAAAAGCTGACACCGTTCGAGGCGGCCAAGGTGACTATGATCGAGTCGGAGCTGACTGGCGAAACGCACTACACTTGCACCATCTGTGGTGGGCAGTTTACGGGCAAATCCTCCATCAAGGAGCACCTGGCAACGTCGCATGCTGCGATCAAGCGACGCTCGTGCGAGTACTGTGGTCGCACGTTCATCCAAACCGGTGATCTGACGCGGCACACTCGCATCCACACGGGCCACCGCCCGTTCAAGTGCCCGGTGGTGGAATGCAGCTTCGCCTTTATCTCTTCCGGCGATCTGCACAAGCACGTACGGCGACACAACCAGCAACCGTTGCCGAAACCGCACGTGTGCGACCAGTGCGGCAAGGATTTTGAGCGTTCGTACGATCTCAAGCGCCACAAGACGATGCACGCCAAAAGTGAGCCCGACTTTAAGGGCATCTCGTGCGGCGTTTGCGGGAAGGTGTTTGCCCGCCAGGATCAGTTCCGTGCGCACACGTACCGGCACATCGGCTACCGGCCGTACCAGTGTGAGATCTGTGGCAAAGCATTTACCGATCCGAGCAACTACTCGAAGCATGCCCGACTGCACGAAATGGATGGGGTCGAGGTGGTGTGCAACTTTTGCGGCCGTCCGTTCAAAAACAAGAGCGCCATCTCGAAGCACATCTTCCACTGCCAGCAGAAAACGTCCGGCGTTCGTAAAACGTCCGACAGCAAGAAGCGAAGGGGTAGTGGCGGCGGCGATACGAAGAAGGAGGAAGGCAAGAAAAGTCGACGCGTGGGAATGGCGGTCGGGTATGGGAAGGATAGCGAAGACGACACGACAGGGATGATGGTGAATCCGAAGCAGGAACACATCGCGTTCGATGAGCAGCGACCGATCGTTACGAAGCGTGAGCTGGTGGATTCGGAGCTGGAAAGCGGTTCACCTTCCGGCGGAGGGCGCAACAagcagcaacagaaacaacagcagcattCGTCGAGGAAGCGTAAGAAACGCCGTCAGCGAACGCCATCCTCGTCCGAGGAAGAGGATGACGATGATAGTGGAGATGATTTTATTGGTCCGAGCTCTTCCTACGAACAGTACGGAACCACCTCCGCCGAAACAGTAAAGCGGGATCGTCGTAGCCGAAAGCTATCGATCGCGCAGTACGATGCAGACAAGTAG
- Protein Sequence
- MPTHSYISNGMATLNYRTPSAATAPTNGGQAHHHHPHHHLHNNHHSSVMPKNMFGMYGPTANLGSNAGGFLQQQQQQQQQQYQHQVQPPLHRIQQSAAMYAPPPAVQQMPSPVTTMPTMVEDDEDDFLSEITVQFDDGVQTLYVGPVEIIDTKGGVVNDQQPTKPAIPPATSIVRSRERFQEERAIVTLEPVGGKTKSQPLPMYLQQQQQHQEQQQQQKLLHKQQQKQQQKQQQKHQQLLQLQQQQQQQQQRLQQQQYQQQLRKQISQHQQQQQLTQPQPPQQKAGQVQQKPRLKQSKMKSQKQQESVQQRQQQQPQQPQQPQHPQQPQHQQNEAQRRQQMILKQQALLQQMNLMKALSPEQLALWQQQSTFKSLNDGLQLSHNAQLQHNQQQQPSHSASTSSSSSVSDWQQTQQQILYQQQFALRFQQQMQNNQQLKVAQKQPPEKSLPPPPATPARSKMCVKQAPMLNFALHNVPSSSSSNMNNQPKTATDAVKRPLSSVVDGRRTGGKHMDPPVTQPAAKRSALVTETTGPIGDIAPATVLRSPPTPTQMVTIRVATEAQPQQQHQPPVLLTQLKQEPMIEEQCEQNVLPDVVPSSPPPPLLPPTPATPLVEVKPSLAAVVVNAVEPSSSSAADATMMASCTERTVASLATVMLASNKRTDDNVPATVDDVPVLSVAEVPHVPNGCSTSNSIETARERQNSKDDDIHSPMPVNNGTQRRRSEEEKMQEMASPSLPVTVAVNDAPVAVKRGRGRPPKTSYHKPAPTPNVVAESSAPKETINDSTTTIVEQRGDVVNDLNDSININVESQASEVKKSSKKKGYISVAALFAPAKTARKHQKSLNVAKKEEISTIIAAEPVPVTAATIEETEVAASATVVTVAANELVVAEHKTEQMISTPAVSVTVNGRDDTEVNGLSTLQDEIAVQSPLPAVGKATREESVVSGDGGESSVSSSTEEGLSSVAKQSTHLLLAGVVPDTEKESSPASDSGIESVTETGTINASKKSKERSRSCLVSVPSPSNLEDKSPQTNDKPAVKVESEQKPRAVSRRQTIAAADIIKNVSNDEEENIGRKGKRTGRANRTLSAKAKEAAEAAEAVEAVEANEAAEAVEAAEAAESASSVSVSSRDELKCPKCKMQFKTELWYRKHLLNYHDIQLDQSMQLLLDDGPSSRAEDETDPSPPSTVEEPELLVPVNGSVKGDENCVANGLPTAEAIIEAVAGEEPQNDTEMEQTSVPVEVVSSKIELPVVESKISGGRKRKSTPSSAANASLEDVSNEITPSLDATTMPSNGSVAAEELLLPAVTNVKVEYRTPGAHSRDLAEADEAEGSDEFGSSPLPNARNRSKTSRRKSQIATPPVVETTTKVEKPDPDDPEKLTPFEAAKVTMIESELTGETHYTCTICGGQFTGKSSIKEHLATSHAAIKRRSCEYCGRTFIQTGDLTRHTRIHTGHRPFKCPVVECSFAFISSGDLHKHVRRHNQQPLPKPHVCDQCGKDFERSYDLKRHKTMHAKSEPDFKGISCGVCGKVFARQDQFRAHTYRHIGYRPYQCEICGKAFTDPSNYSKHARLHEMDGVEVVCNFCGRPFKNKSAISKHIFHCQQKTSGVRKTSDSKKRRGSGGGDTKKEEGKKSRRVGMAVGYGKDSEDDTTGMMVNPKQEHIAFDEQRPIVTKRELVDSELESGSPSGGGRNKQQQKQQQHSSRKRKKRRQRTPSSSEEEDDDDSGDDFIGPSSSYEQYGTTSAETVKRDRRSRKLSIAQYDADK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -