Aste010498.1
Basic Information
- Insect
- Anopheles stephensi
- Gene Symbol
- ZBTB26
- Assembly
- GCA_013141755.1
- Location
- CM023248.1:38443376-38454767[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.073 4.2 7.8 0.1 3 23 275 296 274 296 0.97 2 17 2.6 1.5e+02 2.9 1.3 2 23 332 354 332 354 0.91 3 17 0.0014 0.083 13.2 2.2 1 23 368 391 368 391 0.97 4 17 9 5.2e+02 1.2 0.1 2 23 406 428 405 428 0.86 5 17 1.1 61 4.1 0.6 1 23 434 457 434 457 0.94 6 17 0.31 18 5.8 3.1 2 23 464 486 463 486 0.91 7 17 1.3e-05 0.00077 19.6 2.2 1 23 518 540 518 540 0.98 8 17 3.8e-05 0.0022 18.1 3.3 1 23 546 569 546 569 0.97 9 17 7.6e-07 4.4e-05 23.5 1.1 1 23 575 597 575 597 0.98 10 17 0.0067 0.38 11.1 0.6 1 19 603 621 603 624 0.90 11 17 0.02 1.1 9.6 0.3 2 23 665 686 665 686 0.95 12 17 6.5e-05 0.0037 17.4 5.1 2 23 693 714 692 714 0.97 13 17 1e-07 5.8e-06 26.2 0.7 1 23 721 743 721 743 0.98 14 17 0.00014 0.008 16.4 1.6 1 23 749 771 749 771 0.97 15 17 1.4e-06 8.3e-05 22.6 1.8 1 23 802 824 802 824 0.98 16 17 4.1e-06 0.00024 21.2 0.5 1 23 830 852 830 852 0.98 17 17 2.1 1.2e+02 3.2 2.6 1 23 858 880 858 880 0.94
Sequence Information
- Coding Sequence
- atgtTGCTGCGTCATATCATTCCTTCGAATAACGAAGTGGAGGAAATCTACATAGTGAGACAGGAAGAAGATTTGGAAGAATCGAACGTCAACCCACTGGATTCTGGAGCAGACTCAGGCATAGTCTCGACAACATTTGTAAAAGAAGATGTGGAAGTTAAGATCGGACAGGAAAATGAGTACTATTTGAATGAAGATTATGCTGATCGTTCGCACAATAGTATCAGAGAAAAATGTGCTAAAAAAAGTAACAGCAGTGCTTACTCCAGCAGAGATCATGCATTACGGGAGACGGTGCGAGACAAGAAAGCTTACACGAAAGAAGACACACTTGAAAGGAGCTCGGTATGGCATGCATCGAAAAGTAAAACCGATTTTACAGTGTCGCATCGTGAAGATAATGGCAACATAATTAAACTAAACCTGTACGAAAAATTTCCGGGAGGTATTAAGGCCGAATTAGATGAAGAAGGTCTTCGATCCCCACTGAGTGCTGCGGATCGTTCAGATAGAAGCGTTTCAGTGCCGGACGATGCGCATATTAACGTAGATGACGCTCGACATGAGTTAAGCACAAATGACACTGACGGCAGTGATGGGTTTCACCCGCCGGCAGCAAAGAGACAACGttccaaaaaacaacaagagcCACCCGTTCGGAAAGTAGGCAGGCCACGTAAGAAAATAACGGAACTGTTTGAGTCTTGGCATGCATCTTCCAAAAGCAAGAGACGAAAACATTACACGTTTGAAACAGGGGGCGAGACGTTGAACCGAACCTGCGATGAAGCTGACGAAGTAGGAAAGGACGATGTAACGTTGTGCTATATATGTCAAAAAGATTTGATTTCGCGGACCGAACTGCTTGAACATCTTCAAAGTGTGCACGTGAAAGATATTCCCTTCAATTGTACAATGTGTGTTTCTGAGACGATTACAAATTTGCATCGACTGAATTTGCACCATCAGCAACATGATCAAACGTTGAAGCGACGTTGTCTCTATTGTCCAGCTCGCTTTTCTTGTGGACAAGCCGTCAGCAGACATATGCGCAATCTACATCAGCAGCAATACGTAAGCGATGCAGAAAAGAATAGGCGCTTTGTGTGCCGGTACTGTGCCCAAAAATTCACTAAAATGTACGATCTGGAGAAGCACGAAAGGAAAACCCACATGGAACAATCTAGCGACGAGGAATACATGAACCGCGAATTGACGTGTTATATCTGTAATAATTTCGTAGGTAAATCACGCGAAGATCTTAACGAACACGTAGGAATGCATGCGGACTGGCTACCGTATCGATGCGCGAAATGTGACAACAAGGTGATAAATTCGACCAGGGTCCTGCGGGAACATCTTCGTCAGCATGCTGCAGGTTTGGCCATCAAGTGTGTTTACTGCGAGAAGCGTTTTGCAACGTTGGCTGACTGTCGACATCACGAGGAACGCACTCACGTGCAGGAGAAACATGTGGATGAACTGCAAGAAGCCAAAATACAATCGGAAATACATGATACGAAAGTTATTGTGACTGATGGACAGAAGCGATTTCAGTGTAAAAGCTGTGATCGTTCGTACACGATGCTAAGCACCCTAAGGCGCCACCAGAATGTCCACTCGCTGGAAAACAAGTTTGAATGCAAATATTGTGGCAAAGTGTATCACAAGTCCTCTTCACTTGAAACGCACGAGAAACGGAACCACGATGGGAACAGTCCTTACGATTGCAATGTTTGTGGTAAACGTTTCAAGGAATCCAGCAAGCTGATTGAACACCGCCGTACCCATTCTGGGGAGAAGCCGTTCATTTGTGAAGTTTGCGGTAAATGTTTCCGCATTCGACAGGTATTGAAGGAGCATAAAGTAAGCTGCTTTGGTCCGGAAGCCGTACAATCCTGTTACTGTGCGCTCTGTGCCCAAACCTTCGATAGCCTTTCAATAGCTCTGCAGCACGTGAAAGCCTACCACGAGTCGGATATACCCGACAGAAAGTGTCGTTATTGTGATTTGATCTTCCGGGAGGCAGAATCGTTGGTAGAACACGAGTTCCGCCACACCCTGCCGGGCATAATCACGTGCAATGTTTGCAATCGCATCTTCAAACACCATAAAAATCTCATGCGCCACGTTAAGATGCATGCCGATCAGCCAGTACCGTACATGTGCGATTTGTGCGGTAAAACCTTTACGCAGAAGGGTTCGCTGACGATTCATCGTCGAATACATACTGGTGAACGTCCTTTCTCGTGTGAGCTGTGTCAGAAGGGATTTGTCGACAAAAAGGAAATGCGACGACATTATACATCGCACTTCAATCCGCAAAGTAAATTATATATTCCGAATGCCCACTCTATTGCAATGCCACCGGAGGCCGGCCCTACTGGGAAGAAATATAAGACGTATAATTGCAAAATCTGCAGCCGGCAGTTTACATCAAGCTCTAATCTTGCAAAGCATCTAACAACACATACCGGTGAGAAAAAGTATGTTTGCGATTTCTGCGACAAACGTTTCAGTCAGGGTGGCCAACTAACAGTACATAGGCGCATACATACAGGAGAGCGACCGTTTGTGTGTGACAATTGCGGTGATAGATTTTTGGATGGAAGTAGCTTTAAGCGCCACAAAACGCACCACCTGTGCCGTATGAAATCTTCGTTGTCTTCCGGTGCAGTACCTACCGCGACCGAAGATTCTCCAGTAGAAATACCATTACCTATTGAGTTATCTTATGATATCCCTAAAATAGAACGTAAACATTAA
- Protein Sequence
- MLLRHIIPSNNEVEEIYIVRQEEDLEESNVNPLDSGADSGIVSTTFVKEDVEVKIGQENEYYLNEDYADRSHNSIREKCAKKSNSSAYSSRDHALRETVRDKKAYTKEDTLERSSVWHASKSKTDFTVSHREDNGNIIKLNLYEKFPGGIKAELDEEGLRSPLSAADRSDRSVSVPDDAHINVDDARHELSTNDTDGSDGFHPPAAKRQRSKKQQEPPVRKVGRPRKKITELFESWHASSKSKRRKHYTFETGGETLNRTCDEADEVGKDDVTLCYICQKDLISRTELLEHLQSVHVKDIPFNCTMCVSETITNLHRLNLHHQQHDQTLKRRCLYCPARFSCGQAVSRHMRNLHQQQYVSDAEKNRRFVCRYCAQKFTKMYDLEKHERKTHMEQSSDEEYMNRELTCYICNNFVGKSREDLNEHVGMHADWLPYRCAKCDNKVINSTRVLREHLRQHAAGLAIKCVYCEKRFATLADCRHHEERTHVQEKHVDELQEAKIQSEIHDTKVIVTDGQKRFQCKSCDRSYTMLSTLRRHQNVHSLENKFECKYCGKVYHKSSSLETHEKRNHDGNSPYDCNVCGKRFKESSKLIEHRRTHSGEKPFICEVCGKCFRIRQVLKEHKVSCFGPEAVQSCYCALCAQTFDSLSIALQHVKAYHESDIPDRKCRYCDLIFREAESLVEHEFRHTLPGIITCNVCNRIFKHHKNLMRHVKMHADQPVPYMCDLCGKTFTQKGSLTIHRRIHTGERPFSCELCQKGFVDKKEMRRHYTSHFNPQSKLYIPNAHSIAMPPEAGPTGKKYKTYNCKICSRQFTSSSNLAKHLTTHTGEKKYVCDFCDKRFSQGGQLTVHRRIHTGERPFVCDNCGDRFLDGSSFKRHKTHHLCRMKSSLSSGAVPTATEDSPVEIPLPIELSYDIPKIERKH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -