Basic Information

Insect: Anopheles stephensi
Gene Symbol: -
Assembly: GCA_013141755.1
Location: CM023249.1:79418364-79421025[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00064 0.037 14.3 4.0 1 23 70 92 70 93 0.95

2 12 8.1e-05 0.0047 17.1 3.1 3 23 101 121 100 121 0.99

3 12 3.5e-06 0.0002 21.4 0.4 1 23 127 149 127 149 0.96

4 12 0.34 20 5.7 0.4 1 21 155 175 155 176 0.92

5 12 0.00075 0.043 14.1 0.6 1 23 363 386 363 386 0.97

6 12 6.8e-06 0.00039 20.5 4.2 1 23 410 432 410 432 0.99

7 12 0.00013 0.0074 16.5 0.3 2 23 468 490 467 490 0.95

8 12 0.0022 0.12 12.6 0.0 1 21 500 520 500 521 0.94

9 12 1.8e-05 0.001 19.2 3.3 1 23 529 551 529 551 0.98

10 12 5.7e-07 3.3e-05 23.9 1.1 1 23 557 579 557 579 0.97

11 12 1.5e-06 8.6e-05 22.6 2.3 1 23 585 607 585 607 0.99

12 12 0.036 2.1 8.8 4.0 3 23 615 635 613 636 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00064	0.037	14.3	4.0	1	23	70	92	70	93	0.95
2	12	8.1e-05	0.0047	17.1	3.1	3	23	101	121	100	121	0.99
3	12	3.5e-06	0.0002	21.4	0.4	1	23	127	149	127	149	0.96
4	12	0.34	20	5.7	0.4	1	21	155	175	155	176	0.92
5	12	0.00075	0.043	14.1	0.6	1	23	363	386	363	386	0.97
6	12	6.8e-06	0.00039	20.5	4.2	1	23	410	432	410	432	0.99
7	12	0.00013	0.0074	16.5	0.3	2	23	468	490	467	490	0.95
8	12	0.0022	0.12	12.6	0.0	1	21	500	520	500	521	0.94
9	12	1.8e-05	0.001	19.2	3.3	1	23	529	551	529	551	0.98
10	12	5.7e-07	3.3e-05	23.9	1.1	1	23	557	579	557	579	0.97
11	12	1.5e-06	8.6e-05	22.6	2.3	1	23	585	607	585	607	0.99
12	12	0.036	2.1	8.8	4.0	3	23	615	635	613	636	0.95

Sequence Information

Coding Sequence: ATGTCCACAGCAAATGGAACCACCGAAGTACAGCATCCTAGCAGCCTATCATGTCCTGAGTGCGATGGTCAACTAGTTCTGCAAAGGGATACGACCAATGCCGATGCTGCAGAGAACGATCAACAATATTTCAGTTGCAACTCCTGCGGAACGCGCTTGGAAATACACCTGGAGGATGAACTACCAAAGAATGGCAAGGAAAAACCGTTCCAATGTGATATCTGCCATCGATTCTATGCGACAGCAACCACACTGAAAGTGCACCGGACCTTGCACCACACTACTGGCAAGCGCGAGCTGTGTGACCATTGTGGAGCGAGCTTCCACACCCGCGGACAGTTGAAAATACATCGGCGAGTTCATACGGGTGAAAAGCCCTATAAATGTGATGAATGTGGAAAATCGTTTCCCTACCGAGAAAGCCTTATAACGCACTCGACGGTACATACACGCATCAAACCGTTCTTGTGCGTCGTTTGCAATGCAAGCTTTTCCTGTATCGGGAATCTGCTTAAGCATCGGAGGGCGCGCGCTAACAAGTGCGGACTGGAGAATGTTCCAATCAGGCATATTGGGCCACGTCCGAATAAAAGAACAATGCCAAGCCTATCGGATGGTTGTAAGAATGAGAAAGCAACGAAAACTATAAGAAACCCGGCAGAAACTCTGGAATCAATTGAAGTCTTAGAAGTGAATCAGCACGAATCGGACGTGCTTGACGATCTAGACGAAAATATTCCCAACAACGAACGTTTGGCAGTTGAAGAAGTTGAGCTTAATCAACCGATCACTTCAACTGAATTTAGAAACAGTCAACGAGAAAATTCCTCAACAGAGAGAGATGATTCTGTGGAGGGGTTTTTTGACGATGAACAGATAGAATGGGAATATGTCCATGTAGATCCCGGTCAGCTGTGCGATTCGTCCTCAACACACAGCAGTAGTAGCCAACAGGTGCGAAAGTCCTCTCCATCGATCGAACTGTCTTTAGACAAACCGGATGAAGTGACGATTCAGCGAAATAACGAATTACTACAGAAGCAAATGAAATTGTTACACGAGCTCTCGGACCCAGTCGATAAAATCTTCCGTTGCAAGCTTTGTCCCCAAGAGTACACCACGCTTTACCTGATGGCGCGCCATCTCGAACGACTGCACAACGTGACCCTGGATCGAGCCCGGGATAGGTTACAGTACGTAAAAAATACCACCAAGCAAGAGAAGCGCTATCGCTGCAAGTACTGCGACAGGACGTACGTAAATGCTACATGTTTGAAACGACACATACTTAAACACGAACAGGATGGTCTTTTCCTACACAAATGTTCCTGCTGCGATCGGTACTTTAAGACGGAGCAGGAaacacaccagcaccagcaagaCGCGCATCGCGATCGATTGGAGTGTAAGATTTGTGCGAAAACTTTCGCCAAACCGGATCAAATGCTGCGTCACAAGCGCTATGCACACAGTTCCGATGGAAAAGATCGCTGCAAGTACATATGTGCGCAGTGtgggaaaaactttccctcCAGGATTACCCTGTCCGATCACGAGCGGGCCGAGTGTGGTAAAGCACCCATCTATCCGTGTAACAAATGTGATAAGCATTACTCCAGCTATAGCTCGCTTAAGATGCACCAaacggtgcacgaaaatcgGTTACCGTTTGTGTGTAATTTTTGTGGGAAAAAGTTTCGTACCAAAGGGCAGCTGACGGTACACGAGCGGGGCCATACGGGCGAGAAACCGTTTCGGTGTGATAAATGCGATCGATCGTTTCCGTACCGGCAGTCACTGACGACGCACATGAGCACGCACACGGGTGTGAAGCGGTACGGGTGTACGGAGTGTGATCGGAAGTTTTCCTGCATTACCAACATGCAGGCGCATAGACGTGTGCATCACAAAGCGATGGATGGTGGTACGAGTAAACCGGATTAG
Protein Sequence: MSTANGTTEVQHPSSLSCPECDGQLVLQRDTTNADAAENDQQYFSCNSCGTRLEIHLEDELPKNGKEKPFQCDICHRFYATATTLKVHRTLHHTTGKRELCDHCGASFHTRGQLKIHRRVHTGEKPYKCDECGKSFPYRESLITHSTVHTRIKPFLCVVCNASFSCIGNLLKHRRARANKCGLENVPIRHIGPRPNKRTMPSLSDGCKNEKATKTIRNPAETLESIEVLEVNQHESDVLDDLDENIPNNERLAVEEVELNQPITSTEFRNSQRENSSTERDDSVEGFFDDEQIEWEYVHVDPGQLCDSSSTHSSSSQQVRKSSPSIELSLDKPDEVTIQRNNELLQKQMKLLHELSDPVDKIFRCKLCPQEYTTLYLMARHLERLHNVTLDRARDRLQYVKNTTKQEKRYRCKYCDRTYVNATCLKRHILKHEQDGLFLHKCSCCDRYFKTEQETHQHQQDAHRDRLECKICAKTFAKPDQMLRHKRYAHSSDGKDRCKYICAQCGKNFPSRITLSDHERAECGKAPIYPCNKCDKHYSSYSSLKMHQTVHENRLPFVCNFCGKKFRTKGQLTVHERGHTGEKPFRCDKCDRSFPYRQSLTTHMSTHTGVKRYGCTECDRKFSCITNMQAHRRVHHKAMDGGTSKPD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -