Basic Information

Insect: Anopheles stephensi
Gene Symbol: -
Assembly: GCA_013141755.1
Location: CM023249.1:58252270-58259459[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 6.6e-05 0.0038 17.4 1.1 1 23 253 275 253 275 0.97

2 15 0.0057 0.33 11.3 0.4 1 23 281 303 281 303 0.97

3 15 5e-06 0.00029 20.9 0.1 1 23 481 503 481 503 0.98

4 15 7.9e-05 0.0046 17.1 0.2 1 23 509 532 509 532 0.98

5 15 0.03 1.7 9.0 1.5 1 23 557 580 557 580 0.96

6 15 0.022 1.3 9.4 0.1 2 23 657 678 656 678 0.95

7 15 0.64 37 4.8 0.5 1 23 685 708 685 708 0.89

8 15 0.0032 0.18 12.1 0.8 2 19 716 733 715 734 0.95

9 15 0.0038 0.22 11.8 7.2 1 23 743 765 743 765 0.97

10 15 1.3 78 3.8 0.8 2 23 771 792 770 792 0.96

11 15 1.2e-06 7.1e-05 22.8 1.3 1 23 798 820 798 820 0.98

12 15 0.001 0.06 13.6 0.2 1 23 826 848 826 848 0.97

13 15 2.8e-05 0.0016 18.6 0.1 1 23 854 876 854 877 0.95

14 15 0.005 0.29 11.5 0.1 1 23 891 913 891 913 0.97

15 15 0.017 0.96 9.8 0.2 1 20 1464 1483 1464 1486 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	6.6e-05	0.0038	17.4	1.1	1	23	253	275	253	275	0.97
2	15	0.0057	0.33	11.3	0.4	1	23	281	303	281	303	0.97
3	15	5e-06	0.00029	20.9	0.1	1	23	481	503	481	503	0.98
4	15	7.9e-05	0.0046	17.1	0.2	1	23	509	532	509	532	0.98
5	15	0.03	1.7	9.0	1.5	1	23	557	580	557	580	0.96
6	15	0.022	1.3	9.4	0.1	2	23	657	678	656	678	0.95
7	15	0.64	37	4.8	0.5	1	23	685	708	685	708	0.89
8	15	0.0032	0.18	12.1	0.8	2	19	716	733	715	734	0.95
9	15	0.0038	0.22	11.8	7.2	1	23	743	765	743	765	0.97
10	15	1.3	78	3.8	0.8	2	23	771	792	770	792	0.96
11	15	1.2e-06	7.1e-05	22.8	1.3	1	23	798	820	798	820	0.98
12	15	0.001	0.06	13.6	0.2	1	23	826	848	826	848	0.97
13	15	2.8e-05	0.0016	18.6	0.1	1	23	854	876	854	877	0.95
14	15	0.005	0.29	11.5	0.1	1	23	891	913	891	913	0.97
15	15	0.017	0.96	9.8	0.2	1	20	1464	1483	1464	1486	0.94

Sequence Information

Coding Sequence: ATGAGCCACAACACGATCCCCGTTTGGCAAGTGGCAACCGCGGAGCCGACTGCGCGAGGTAGCAACGCTGCCACTGCACCCGGCAGCCAAAACAATGGTGGAAGCATTTCAACGCTAAAATATGTGACCAACGCACGGCAGAATGTGAAAATCATAAGCATCCCCGGGCAAGGTTCGGTGGCCGGGAGCAACGATGGCACACTTTTGTACGAAACGACGATCGACAGCTCATACCTGGCTGTGACCAAGTCACCTCGCCGACCGACAACAACCgcccagcaccaccaccaccaccaccaccatacgGCTATGTTGAACGATTCCATACTGCTACAAACGGCCGACGGACAGGGCTATCTCGTGGACGAGCGATCGATACAGAACATCGATCAGATTCCACCGGAAAATTTAATCTACGTGACTTCGTCCGATTTGCCGTCGTCCAGTGATAACATGGAACACACTTCGACCGCTCCTTCTCCTTCCCTGCCCTCCAGCGATCAAGCCCATCTTGATTACGTTGACTATGTGCCGTCACCGGACGCGCCGGCCGATCAAACCCAGCCGGCGGCAGTGGCAGAATACGCGGAAGAGTGTCAAGTGACGGAGGAAATCATTACCGACGATTGGGTGCAGTCGCAGGGCGAGGAGTGTGTGCAGGTGACGGTGGATCAGCTCGGGGTGAGCACGGCGATCGCGGTGGACGATGACATTTCGGTGCCGCTCGATCAGGACCAGTACACGCTGTCCCGGCCCTATCCGTGCGATTTCTGCAGCCGGCGGTTTCGGAAGAAGGCAAGCCTGCAGAACCATCTAATGGCACACTCGAACGATCGGCCGCATGTGTGCTATTTGTGCGGGGCTCAGTATGGACGGAGGGCCGATCTAATCAACCATCTGAAGCAGCATGCGTACGCCGACCAGGATGAGTTATCGTTGCGCGGTGGCGATCAGCAGGATGCAGACTATGAACTACCAGAACTGGCCAGCACAGCGGGTCACATCAAAAATCGTATCAGACAGTCGAGCGAGGATGAAGATCTGTACATACAGAACACGATGGTGAGCTACAATTCGCAACCGCCGATGCAGCTCATTTCGACCACCAGCTATGGCACTTCTTCGGCAACGATAGCTTCTCCCTACGAGCAGTGCGAGATCACTTCCTTCAGCAATGGTTCGATAGAAGTAGAGCCACAGCGTTTGACCATTGATAATGCATGCCCAACGGCCAGTTCCACGTCGGGTGGTGTAGAGAAAAGAattggaaggaaaagaaaagtgcctgctgctgctgttgcaacAGATGTTGTGAGTACGGCACGGACAAAGCCAGCCACATTTTCGACCAAAGCAGCCACCGCTGCTAGCCGTCAAATTAAAAAGGAACCGGAAGACACGATAGcggcgccaccaccaccgctcgaCGAACGAAAGCCATTTGTCTGCCCACAGTGTGGCCTATCGTTCGGGAGGGCAAAAGCGCTACTGGCCCATACCCGTacccacacaaacaaaacacaatacgAGTGCGAATACTGCAATGCACAGTTTTACGAATGGTCCCTGCTGCGTATTCACATCAATCGTGTGCACACGGCGCAGCAAGTCGGTAACAGCGAGGAGCACGATTCTGGTTGCGCATCCAGTGCGACGGGCAAGAAGCGCTTCAGTTGTGATAGATGCAGTGCCGTTTTCTTCCAACCCGATCACATACTTCACCACATACAACAGGCGCACGGCGCTGTGGGTGAAAGTAATGCAAGCGCCGATCATAGTAATGTGATCGTTAAACAGGAACTGATACAAGCGCCCGCTGGGGTGGATTACGTGGAGATGGACGGGGAAGCCACCACCGATCCGGAAATAGAGGAAGAAGAGTATGGCGATTTGGATTATACGATCGAGGTGCAGTATGAGAATCGTGCCAGCGAGCCGGACACGCAGCACCCGACCGCTTCCCCGCTGACGTGTCGCGAATGTGGCGAATCGTTCGAAAGTGGGATGGAATTGCTGGAACACTCCGAAACACACACCGCACGGTACGAACCGCACGAGTGTCAGCTGTGTGGTGAAAAGTTCCTGGACGAAGCGACCATTAAGCAGCATGTGCAGGAGCGCCACCAGCACGAGCTGACCGCCACATCGTGTGCGATCTGTGGCAAACGGTGCAAAAGTCAAACGACGCTGATAAAGCACGCCTGGGACCATTCGCGCGAACGGGCCCACTCGTGTTCGCAGTGCGGCAAAACGTTCCACCATATGGCGCGGCTCAAGCGGCACATGGATTCGCACCGCAACAAGACGGTCCGGTGTGAGGTTTGTATGCAGGAGTtcccggacggacggacgctGATGAACCATCGCCATTCGCACACGAAATCGAACGAATATCCGTGCCACGAGTGTGGCAAAACGTTTGGATCCCGTTCGTCGCAGCAGATCCATATGCGCATCCACACCGGCGAACGGCCGTACGCGTGTCGCTTTTGCTGGAAAGCGTTTGCGGATGGTGGAACGCTACGGAAGCACGAGCGGATACATACCGGCGAAAAGCCGTACGCGTGTCCCGTGTGTCCGAAGGCGTTTAATCAGCGGGTGGTTCTGCGAGAGCACATCCGGGCCCACCATTCGCAGGCTGATGCGAAGCGCGGTTCGGCCAACCAACCGTACTACTGTACTGTGTGCAGTTCTCCCTTTTCTACGACCGGTGATTTGGTGCAGCATCTGATCGAGCACAGCGATACGAACACGGCGATGAAACGAGAACCACCAACCTTCCCGCGGAAGTATAAACGGCGCCGTAAGCTCAATCCGCACGAGCTGGAGCGACTGAAGAGTGGTCGTCGGAAGCAGAAAAACAGGCAGCGCGACGACGATGTGGACGATacggtggtggaggaggatgGCTACGAGGAAAGCAATAGCGCTAAGGAGAGTGTGAAACGCGCTACTACTAAATCTTCGCAGCATTCGTCCAGCCAGGATGGTGCTGCTCTCAGGAACAAGCGGAGCAACGAGCCACGGGCATCTAAACGGCGCGTGTCGGTGCACGATATGCTGCACGCGAACGGCATCAATCTGTTGAGCAATATCGTGCTGCTGCATGGACAGCAGGAAGGGGACGAACCGTCGAACAACGAGCACGGCAATGTTCCTCCGGAATCTCCGGAAGCGAAACCAGCGCAGccaaccaccagcagcaggcgcgGCACAATTGCTGGGAACGTACCGAAGTCAAAGGTAGCTGGCCCGGCGCGAAAGAAACCATCCCGCAAACGTTCTTCACCGTATGCCACCAAAGATGCTCCGCACGATGACGGGGAGCTAAAGCAAACGGACGCTGGTGACGATCGAGGTTCACCGGCACACTGCGGCGGTGGTAGCAGCACGATCACGAACGTGATGGAAGCATTTTTCCGTAGCCGGAAGCGTAACTCGCTGCTGCCGGAAATACCCCCGCACCGGATCTCGTCCGTAAGCTTTCCCTTGCTGGACGATGGAAACACAGACGATCCGCTGGACGAGCCGACGGCGATCGTGGACCAGTCGCGCAAAAGCACCACCTCGTTTAGCGCTTCGGAAGAGCACGCCCTCGACCAGCAGCTGCTGATGGAAATATCGCACAAGGGCGGCAAGTACACGGAACGGTTCAACAGTGACACCGTGCACGATCtggaagaaattcttcgctCGCCGTTAAAGAGCGTTGTTCCGGCGAAAAGTGTGCCGCACAGACAGCCTCCGAAGAAAGGAAAGGGCAAAGCGAAAAGTAAaaagtcagcagcagcagcagcagcaacaccgacCAAACAGCAGCAATCGAAAGCGGTCGAAAAGAAGGTGAAGAAAGTCGTCCCGCAACCATCCCCACCGGCAGTGTTGCGCAGTCAGCGGTTAACGCGCCGTCAGCTCGAACGGGAGGTAAACTTCCTGAAGGAAGCGTACGACACGAGTGTACCGAGTTACGCACCGGAATCAGTCAAGGAAGAAACAGACCCATCGCTCGGTACGATGGTGCCACCGGAAGCAATGGACAGTGGGACATCGGCTAACGTTGCGAACGCTGGTACACCGGAGGAACGGGGGGTGGATGCTTCCGAAAGGTTAGCTGCCATGTTGCTAAACGATGGACTGCCAGCACCCGACGATACAcagagcagcagtagtagcggtAACGGCGGTTGTGGCGAAAGCACTATCAGCAGCattttccaccagcagcagcacgatacGTTTGACTCGAAACCGTATGCAGAATCGTTGCATATGATGGAGGAACTGGTCGATGTACAGAGGAAGGACGATGGCACGGTGGATGAAAACGATCCCAGCTGTCTGTATGAGGGGGACAGCAAAAGCACTACCTCAGCCGATGGGACGGTAGACTATCGATGTTCGATCTGCGCTGCCTGTTTCGATGATCGAGCACAGCTCATCCTACACGTTCCGGTACACATTTAA
Protein Sequence: MSHNTIPVWQVATAEPTARGSNAATAPGSQNNGGSISTLKYVTNARQNVKIISIPGQGSVAGSNDGTLLYETTIDSSYLAVTKSPRRPTTTAQHHHHHHHHTAMLNDSILLQTADGQGYLVDERSIQNIDQIPPENLIYVTSSDLPSSSDNMEHTSTAPSPSLPSSDQAHLDYVDYVPSPDAPADQTQPAAVAEYAEECQVTEEIITDDWVQSQGEECVQVTVDQLGVSTAIAVDDDISVPLDQDQYTLSRPYPCDFCSRRFRKKASLQNHLMAHSNDRPHVCYLCGAQYGRRADLINHLKQHAYADQDELSLRGGDQQDADYELPELASTAGHIKNRIRQSSEDEDLYIQNTMVSYNSQPPMQLISTTSYGTSSATIASPYEQCEITSFSNGSIEVEPQRLTIDNACPTASSTSGGVEKRIGRKRKVPAAAVATDVVSTARTKPATFSTKAATAASRQIKKEPEDTIAAPPPPLDERKPFVCPQCGLSFGRAKALLAHTRTHTNKTQYECEYCNAQFYEWSLLRIHINRVHTAQQVGNSEEHDSGCASSATGKKRFSCDRCSAVFFQPDHILHHIQQAHGAVGESNASADHSNVIVKQELIQAPAGVDYVEMDGEATTDPEIEEEEYGDLDYTIEVQYENRASEPDTQHPTASPLTCRECGESFESGMELLEHSETHTARYEPHECQLCGEKFLDEATIKQHVQERHQHELTATSCAICGKRCKSQTTLIKHAWDHSRERAHSCSQCGKTFHHMARLKRHMDSHRNKTVRCEVCMQEFPDGRTLMNHRHSHTKSNEYPCHECGKTFGSRSSQQIHMRIHTGERPYACRFCWKAFADGGTLRKHERIHTGEKPYACPVCPKAFNQRVVLREHIRAHHSQADAKRGSANQPYYCTVCSSPFSTTGDLVQHLIEHSDTNTAMKREPPTFPRKYKRRRKLNPHELERLKSGRRKQKNRQRDDDVDDTVVEEDGYEESNSAKESVKRATTKSSQHSSSQDGAALRNKRSNEPRASKRRVSVHDMLHANGINLLSNIVLLHGQQEGDEPSNNEHGNVPPESPEAKPAQPTTSSRRGTIAGNVPKSKVAGPARKKPSRKRSSPYATKDAPHDDGELKQTDAGDDRGSPAHCGGGSSTITNVMEAFFRSRKRNSLLPEIPPHRISSVSFPLLDDGNTDDPLDEPTAIVDQSRKSTTSFSASEEHALDQQLLMEISHKGGKYTERFNSDTVHDLEEILRSPLKSVVPAKSVPHRQPPKKGKGKAKSKKSAAAAAATPTKQQQSKAVEKKVKKVVPQPSPPAVLRSQRLTRRQLEREVNFLKEAYDTSVPSYAPESVKEETDPSLGTMVPPEAMDSGTSANVANAGTPEERGVDASERLAAMLLNDGLPAPDDTQSSSSSGNGGCGESTISSIFHQQQHDTFDSKPYAESLHMMEELVDVQRKDDGTVDENDPSCLYEGDSKSTTSADGTVDYRCSICAACFDDRAQLILHVPVHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -