Basic Information

Gene Symbol
RERE_1
Assembly
GCA_013141755.1
Location
CM023248.1:80990736-81146560[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.9e-11 2.2e-08 33.8 0.1 2 45 1660 1704 1659 1705 0.91

Sequence Information

Coding Sequence
ATGGCTGCTGTAAACTCGGTCCAGAATAGCATTCGGTTGCCGTTGGCCGGACTGGCACCGCCGCGCGTCCTTATGTGTAGTGCCTCGATGGGTGCGGAAGGTTCCGTCACACTTCAGCTCCGGGAAGCGGTACAGGCGCCCGATGCGGCCGGGTCCCTCGATGGAGCGCTCACGATCGGCTACCCAGATCCGGAAATGTTGGCCGACATGCTGGGCACATTCCAGGGTGCATCGACCGGCGGGACCGATTCGGATGCTGGCAGTTTCGAGCTGCTGCAGGACAGCAATGGTAGCTCGACCGGGGCAACGCTACGCGCGACGACCGCCGATCAGATCGAGCAGCTTACCGGTGCTATACTTGCAAAagcgaacagcagcagtagcggtAACGGCAACACGACAGGCACGTCCACCGTGACGATAAAAGCAGAACCGGGCACGAAAGCAGTCGCGGAAAAGACGAATTCCACCACCAACCTACTCCCTGCAACCAGCCATTCGTCGAGCGCGACGTCCAGCACCACCAACCTGTCTCCATCGTCGACGGCCATCTTGCACCACGGTACCACGATGGTGACCGTGAAAAGTACGGCCGCAGCGAGCAACGGTGCGATTGCAACCGCCACCAGCCCTACCAGCCTCATCCTCACGACGGTCAGCCGGGCGGAGACGGCTTCCGGCAGCAGTAGTGCGTCTTCTTCACCGTCGGCGGCATCCTCACCGGGGACGGTTTCGCTGAGCGGGCTGTCCGGTGGGCTTGTGAAGAAACCACGGCCCAAGACGGTATCACCGACACGGCACGGACCACAACAGTGTCAGgtctgtagcaaagtgtttggtAATGCATCCGCCCTCGCCAAACACAAGCTAACGCACAGTGACGAGCGCAAGTATGTGTGCGGAATGTGCTCGAAAGcgttcaaacggcaggaccacCTCAATGGACATATGCTGACGCATCGGAACAAGAAACCGTACGAGTGTAAGGCGGATGGCTGTGGCAAATCGTACTGTGATGCACGATCGCTTCGACGCCATACCGAGAACCATCACAGCGCAATGGGGCTGGCGTCCGACACGGCCAGTCCCGGTCCGGGCGGAAGCAATGCTGGACCACCCGGTGGGCTTAGTTTATCACCAGCGACAGCTAGCGGCGATGCAAGTTCTCCGCATGGAGCAACACTAGTCcaattcaccaccaccaccgcaacAACCACCGGGAACGGTACGACCggcagcagctccagcagcaacagcagtaatTGCAGCCTTTCGAGCAGCAGTTCGAGCAGTAGTTccagcagtagcaacagcagcagtagtagcagcagcagcagcagtagtagcggcAACGTCAGTGACTCCAGCTCCAGCTGCAAATCGCCTTCGCCGAGCTCCCCAGCACCAGGCACGGGAAATGAAGGCCTTACGCGCCAACAGCTCGATCTTATTTCCCAAATCATGCAGCAAACGAAGCAGGCaaatgcagctgctgctgctgctgctgcagcggcCGCTTCCAGTGCGAGCTCGAACGGTAACGGCACCGGCCAGTTGATCACCACCAGCCAGAAGGTTCCAGTGCGTCCACGAACGTGGAATATGCAGCTACAGCTCAGCCAGAACAAGCTGTCCTCGACTAccgcaacgacgacgacgacactaACGTCAGCGGCGGCGGCGCCGACAACGGCAACCGTGGTCAGCACGGTGCCAGTGCCTTCAATGGCAGTCATACCGACGACCACGCTGTCCACCACCGGCAACTCCACCATCATCGCCTCCCACCCGAACGGTACCATCACCAGCCTCATCACCAGCGGCAAGGCGCCGCCCGGTGGCAGTGCAAGTGCCGATCCTAATGGACCACACGCCGGGACAGCGTCCATCTCAGTGTCATCGTCTGCGGCCGCCGGTACGCCTTCCGTCGGTGCGGTCAGTGTGGTTTCGACGGCGGGCTCCACTACAACGACCACCACACAGACGACCGGGCAGGCAGCGCCACCTGCTGCTACTCAACAACCTGCCGGcgtcaccaacaccaccaccaccaccaccaccaacgccgCTGCAGCCGCCAGCAAGCTTGAGCTGAAGCCGGTCGAGTGTAACCTGTGCCATCGGAAGTTCAAAAATATTCCCGCCCTCAACGGGCACATGCGACTGCACGGCGGGTACTTCAAGAAGGACTCGGAGGCGAAGAAATGTGATAAGAAGGAAAACACTGGCCCACCACTGCAGACGGCTAGCGTCGGTGTGCGGGCCCTGATCGAGGAGAAGATCATCAACAAGCGCAGCAAGGATTTGAAGGGTTCATTCGTCGTGCCGGCACCACCGCTAACCGCCCGTCGGCTGATCGACGCCAACGAAGCATTCCTCTCACCGAAACCGAGCGCAACGGTCGCGATCGTCTCCACGTCCAACGGTACCGCCCAGATCATCAACACCGCCACCCTGCACTCCAAGGCCACCCTCATCAATGTCACCAGTGCGCCCCAGTCCATCAGCACCTCGTCGGCACCGTCGATAACGATCAATGGCTTAGCAACGGGTGcgaccaacaccaccaccaccaccaccgtcaacGGCACTGAGCTGAAAGATGCCACCTTGATCGAGCTGCTAAAGCGCGGCACTAAGGTAGCGGTGAAACGAGCGGCCTCTACCGGCGATACCTCCACCATTCTATCGCTTCAGCAATCGACGAGCAATCCCACGATCTCTTCCACGCCCATCACCAACCACGCTACGGCTCAGCTGATCACATCGACCAACAGCCGTACCGTGACCGTTCTGCCCGCTGCGACACTCTCCACAACGCCCAAGATGACGCCCACGGTCACCGGCACGAGTCTGATGGCGAATCCCACCAACGACGCCAGTCCACTGTCGCTTACCATATCGCAAACGCCAACTTCAACGCCCGGCGACGTGTTCACGCTGGCCTACGCGTCCGACTTTGGCGACGGGGATGTGTACAGTGTGAGCGATACGGCCATGCTCCTGCAAGCCGTCGACCCGATCCAGCTGCTGCAGGATTCAAACTCAACCGAACCGCTCGACGAGATCGCTCTCTCGGACTACGGCTCCATCAGCGATCAAGGGTTTACGCCTTCGCGTCAAATTCAAGCCGTGCTGGACTCTCCCCTACCCGAAGGACTCGCCGAGTTTGGAGCACTGCACGCCAAAGACTTTAATGTCCTGTACGGTggcagcacagcagcagccggcGAGGCGAACGGAGGACCAGCGTCCTCCACCACCAACCTGCTACAATCATCCCCATCTGGACCTCATCTTTCGCCGCTTCCCTCACCACTGGCCTATCCAACGCCTCCGGCCTCGCACGAGGCGGTGGCCCAGGCATCGCCTTTCCTGGACGACTCGCGTCACTTCACCGACGCCGGGTCCTTCTTCGATGACAAGCGCGGAGCGCAGAGCTTCCTCGACGATGGCTTCTTCAAGACCGAACCGAAGGACGAGGATGCGAAGCTGTCCGACAGCGAGAAGATACTCGCCCTCAAGCACGAGCTGCTCGACGAAAACCACGACCTGTTCCGGGCGAACAAACACCTGCTGGACGAGCACTGTTCGGAGCTGTTCAAGACGGAGGACAGCTTTTTCGCCGAGTCCAAGCCCACCTCCGTGGACGGAACGTCCAAGATGAATCTGGACTTCCTGGACGATACGCACATGTTCATCGAGGAGACACGGAACGCGTCCTCTCCCCTGTCGAATGCTTTCTTCTCCGCCACCATGTCGTCGGCGGCCGAAGTTAAGGAAGCGCTCGATGAGGTCCTACcgaacgatgatgacgatgacatCGGTGTGCCGGAGGGGGACATCGATTTGTACTACCTAAATGGCCTTTCCTCGCTGCAGTCGCAAATGATGCCCAATTCGGACGATCCGTTGCTGTCCTCCTCACCGAAAGACTTTGCCCACCGGCAGCATCAGAAGTTTCTCTTCGAGCAGAGTCAAgccgcccagcagcagcagctgcagcagcaccagcaacagcttcatcagcaacagcaacaactgcaacaacagcagcaacatcagcaacagcagcaacaacagcagcaacagttgcttcaacagcaacagcagcaacagcagcagacggGCGTTAGCGCGCTCAACCAATGCATGCCTCCCAGTGccaaaaaatcgaaaccctCCGATGTTGAGTCATCGAGTACGCCCCTCACGGTGCAAACCGATCCCATGCCAAAGGACGCGGACAGTGTGTTCCTCAGCCCGAGTAGTCTCTCCTCGCACAGCtgctcctcgtcgtcgtcctcttcCTCACTGTCGCTATCGTCGATAGCTTCACCCCGGCTGCAGCACGCTCTCCTAGGCAGTGCCAACTCTGGCGGACCCGTGTGGCCCCGCAAACGTTCCCAAACAACTTCATCCACCGGTGCGGCCAACGTGTCCGGCCTTCCCGTAGGCCAACGAAAGCCCACAATCTATCTGTCGAAGCTGCGACGATCCACGACGTCGCTTCTGCCGGCTCTGCACTACACCCCTTCGCCGATGCTGAACCCCGAACGTGCCGGAACGACCGGGCTGTACACGAACGTCAACCGTGCACGATCGACTGGTGCCGCCGATGTGGATCTCGACTCCACGATGGACAGCACGAGCGATATCTTCTCCGAGCCTCCGCTACCGATACGTCCCCGCATCAACCTGGGCCCCGACTATCAGGCAACGCTGCCCGAATGTACGCGACCCGTCTACGGTGGACTTCAGCAGTTCCACGCCGCCCAACAGGCGCAACGGCTCTGGGATCCGGCGTTAGCTCCGAACGAGCGGCAAGTGCAACGTTTCATCGAGCTCGCCCGATCGTCTGCCGCTCCGCTCGGATGCCACACGGAGGAGAATGCGCTGCGTGCTCTGCTGGAGGCGAACGGTGAGATTCACCAGGCCATCCTGGGAATGCTACAAGGTCCACCCGCCACCATCCATCGCCGCTGGACGGCGGACGAGATCGAGCAGCTTATCCAGGGTCTCGAGGAGTACGGCAAAGACTTCCACCGAATCGCTCGCGATTTGCTTCCCGGCAAATCGACTGCGGACTGTGTGCAGATGTACTACTTCTGGAAAAAGCTCGGAATCGACTACAAAAGCACGACGACGCTGGTGGGATCGAAGTACGCCGGTTTGCACGGATCGCCGTCGCCAACACCATCGCCACCGGCACCACcggcaccactaccaccaccaccaccggtagaAGATCTTCTGCTGGACCATCTGGACTATACGGCCAATGCTAGCACGGGGACGACCCATGCCCGATCGCAACAGTCCACCCAGAACGTTGGAAACCTGCAGCAAAATGGCCACACCGTCAGTACGCCAAGCGATGTCCGACCGCATGTTTGCGAGGTTCCTGACTGTTCAGCGAGCTTCTCGTCCAAAGCGGCCCTCCACGGTCACATCCGCATACACTGCATCGGGCGTAACCACAGCACAGTTCAAAATGGGTATTCAATAAGGTAA
Protein Sequence
MAAVNSVQNSIRLPLAGLAPPRVLMCSASMGAEGSVTLQLREAVQAPDAAGSLDGALTIGYPDPEMLADMLGTFQGASTGGTDSDAGSFELLQDSNGSSTGATLRATTADQIEQLTGAILAKANSSSSGNGNTTGTSTVTIKAEPGTKAVAEKTNSTTNLLPATSHSSSATSSTTNLSPSSTAILHHGTTMVTVKSTAAASNGAIATATSPTSLILTTVSRAETASGSSSASSSPSAASSPGTVSLSGLSGGLVKKPRPKTVSPTRHGPQQCQVCSKVFGNASALAKHKLTHSDERKYVCGMCSKAFKRQDHLNGHMLTHRNKKPYECKADGCGKSYCDARSLRRHTENHHSAMGLASDTASPGPGGSNAGPPGGLSLSPATASGDASSPHGATLVQFTTTTATTTGNGTTGSSSSSNSSNCSLSSSSSSSSSSSSNSSSSSSSSSSSSGNVSDSSSSCKSPSPSSPAPGTGNEGLTRQQLDLISQIMQQTKQANAAAAAAAAAAASSASSNGNGTGQLITTSQKVPVRPRTWNMQLQLSQNKLSSTTATTTTTLTSAAAAPTTATVVSTVPVPSMAVIPTTTLSTTGNSTIIASHPNGTITSLITSGKAPPGGSASADPNGPHAGTASISVSSSAAAGTPSVGAVSVVSTAGSTTTTTTQTTGQAAPPAATQQPAGVTNTTTTTTTNAAAAASKLELKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDSEAKKCDKKENTGPPLQTASVGVRALIEEKIINKRSKDLKGSFVVPAPPLTARRLIDANEAFLSPKPSATVAIVSTSNGTAQIINTATLHSKATLINVTSAPQSISTSSAPSITINGLATGATNTTTTTTVNGTELKDATLIELLKRGTKVAVKRAASTGDTSTILSLQQSTSNPTISSTPITNHATAQLITSTNSRTVTVLPAATLSTTPKMTPTVTGTSLMANPTNDASPLSLTISQTPTSTPGDVFTLAYASDFGDGDVYSVSDTAMLLQAVDPIQLLQDSNSTEPLDEIALSDYGSISDQGFTPSRQIQAVLDSPLPEGLAEFGALHAKDFNVLYGGSTAAAGEANGGPASSTTNLLQSSPSGPHLSPLPSPLAYPTPPASHEAVAQASPFLDDSRHFTDAGSFFDDKRGAQSFLDDGFFKTEPKDEDAKLSDSEKILALKHELLDENHDLFRANKHLLDEHCSELFKTEDSFFAESKPTSVDGTSKMNLDFLDDTHMFIEETRNASSPLSNAFFSATMSSAAEVKEALDEVLPNDDDDDIGVPEGDIDLYYLNGLSSLQSQMMPNSDDPLLSSSPKDFAHRQHQKFLFEQSQAAQQQQLQQHQQQLHQQQQQLQQQQQHQQQQQQQQQQLLQQQQQQQQQTGVSALNQCMPPSAKKSKPSDVESSSTPLTVQTDPMPKDADSVFLSPSSLSSHSCSSSSSSSSLSLSSIASPRLQHALLGSANSGGPVWPRKRSQTTSSTGAANVSGLPVGQRKPTIYLSKLRRSTTSLLPALHYTPSPMLNPERAGTTGLYTNVNRARSTGAADVDLDSTMDSTSDIFSEPPLPIRPRINLGPDYQATLPECTRPVYGGLQQFHAAQQAQRLWDPALAPNERQVQRFIELARSSAAPLGCHTEENALRALLEANGEIHQAILGMLQGPPATIHRRWTADEIEQLIQGLEEYGKDFHRIARDLLPGKSTADCVQMYYFWKKLGIDYKSTTTLVGSKYAGLHGSPSPTPSPPAPPAPLPPPPPVEDLLLDHLDYTANASTGTTHARSQQSTQNVGNLQQNGHTVSTPSDVRPHVCEVPDCSASFSSKAALHGHIRIHCIGRNHSTVQNGYSIR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00103982;
90% Identity
iTF_00103982;
80% Identity
iTF_00108702;