Basic Information

Insect: Anopheles stephensi
Gene Symbol: bab1
Assembly: GCA_013141755.1
Location: CM023248.1:31892946-31933785[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 2.8 4.8e+03 -2.8 0.0 29 36 226 233 226 240 0.80

2 3 5.6e-13 9.5e-10 37.8 0.0 1 45 474 518 474 518 0.95

3 3 0.023 38 3.9 0.8 4 20 647 662 646 662 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	2.8	4.8e+03	-2.8	0.0	29	36	226	233	226	240	0.80
2	3	5.6e-13	9.5e-10	37.8	0.0	1	45	474	518	474	518	0.95
3	3	0.023	38	3.9	0.8	4	20	647	662	646	662	0.93

Sequence Information

Coding Sequence: ATGGGTAGCAGCGAAGGACAAACGTACTGTCTGCGATGGAACAATCACAAATCGAACCTGGTCGAGATACTGGATGCGTTGATCAAGATGGAGTGTTACGTCGACTGCACGATCTACGTCGACGATCAGGTGCAGTTTAAGGCGCACCGTGTTGTGCTGGCCGCCAACTCGCCTTACTTCCAGACGATCCTGCAGGATGTCCCGATGGATCACTGCAGTATTTTGTTCCCGGGTGTGCAGGAGTTCGAAATGCGCGCACTGCTGGAGTACATGTACACCGGTGAGGTGAACGTGACTCAGGCACAGATTCCGCGTATTATGAAAATCGCCGAACAGCTGGAAGTGAAGGGCCTTTACGATATGGCTGATTTGAAGGGTCGCTTCAACAAAATGGTCGACGTGGACCATTTGATGCGTGATCGCGACCCAGCCACTACACTGctcgccagcaacaacaactacaGTAGCAAAGGGTCCTCGACTGCTGGATCAGCAACTGCGACAGCATCGTCCTCTTCTTGGAAAGACGCTCCACCGACCAGTAGCAGTGGTGGTATCAGTAGTCAGTTCTCACACCATCAACATCAGCACCAGTCATCGCCGGTCATCTCGACCTCGACGAACATATCGATTGCTCAGAGCAGCAGTTCCTCCCCGCCGTATTCGTACAAATCCCCGTACTCCAGCCTATACTCACGCAGTCCCGGTGCCGTAGAACGTGATCGCGAACGTGAAGAACGTAGCCGTGACCGATCCTCATCCTTCTCACACTCGGCCACCTCTCCACATCGCATCCAGTCAACCTCGGGTTCCTCGGCATCATCCGTTGCGACACAGATTGCACTACAGTCACAAGGCGGCAACCATCAATCGTCCACGCACCAGTCGTCCAGCAGTTCCTCCAGCGCTACCTCCGCTTCTGCTCAACCATCGACAGCGGCAGCGGCTGCGGCATTAGCAGCCGGTTGGCCAGGACTCGGCCAAACACAGCTGCACAGTATGCTCAGTTCTGCGTACGACTCCAGCACCGATATGAACCCGCTCAAGCGCAAGAAACTGCAATCCATGTCTAGCATGCTCCGCGACACTCCAATTCTGCGAAACGTACTGGCTCAGGCGAATCCTGCCGACTCCTCCCAATCGACGGGTGGAGGTGTTCCGACtggtgcagcagcaacggtGGCCACGATACAAACGATCCAAGGCAGTATGAAGTCCGATCCCGAGCGACCCAGCAGTCATCACTCTAATGGCAGTGGTTATAAGTCAATCAAGGAACCATCCCATTCACCATACGCGGACAAATCCTTCGATGATGATCTGCTGGACTCACCCCACAATTTCGGCGGCGATGCTCGGTTGGCTTCGTACGTGCCACATCAACAGCAGAAACCGGAATGGAAGCGTTACAAGCAGTACACCCGTACGGACATCCTGAACGCGATCGAGTGTGTGCGTAAGGGCATGAGTGCATTGCAGGCTTCGCGTAAGTTTGGTGTTCCTTCGCGCACGCTTTACGACAAGGTGAAGAAGCTGGGCATCACCACTGGACGTCCGATTAACAGGGCACTCAAACGATCGCCCAGTTCAAGCGGTAGCCCGGCATCTTTCCCGTACGGTTTAAGCGGTGCGAGTCACATGTTTGGTCCAGGCAGTGGTGCTCCCGGAAGCTCACATCCGGGTGATCACCATCAGCAAATGCCTTCTCAGTCACAGCAACAGGACGACGACGCATCAGCGgccgcagctgctgcagcggcagcagccaTGGCACATCATGAAGCCGGTCGTATGATCAAACTCGAGCATGGAAGCCACCATGGACTGCCACCTACGATCCCACATCCTGCAGCGGCACTGCTCGATCCTTCCTTCCTGCAGCAAGCGCTGGAAGCTCGTGGTGGAGACATTGCCGGTCGTGAAGCACTACACGCCATGGCCTTTGCGGCAGCAGCTCATGCGGCTGTTAATGGTATGAGCACGTCTCCGGGCACGCACGGAACAGCTCGATCACCAAGCCCAAGTGTGCTGATGAAATACATGCGCTCCGTCTCGATGAGCTCTCCGGAAGACGATCGTCACCATCCggcgcagcaacagcaacagcgagAGCGAGATCCTGCGGAAGCACACCCCCATCGGGATGGCCATCACCACAACGGATCAGATCCTGTCTACGCAAGGCGCGATCATCCCATGGAGCAGGACTCGATCGACGAGACGGGCAGCGAATGTGGTGAGCGACCCCCTAGCGGTCCGGGACCGTTGGAAGGACAGGACGATCACGTAGAAGATCTGTCCATGGGCCACAAGCGTGATTCAGAGGAACGAGGACCCTCCGTATCACCGCCTCCTTCGTCCATTGTTCGCGCAACGCAACGATCGCGATCACCCTCACCACAACCGGTACCACCCTCTCTACCACCACCCCAGCAGCAGGGTGTCATCGTGCCAGCGCCCGGTAAGTTAAAGGAAGACTACAACATCCCCATCAAGCGGGAAATCATCGCCGACAGTAACGCACCCTCAGAATCGTCGTAG
Protein Sequence: MGSSEGQTYCLRWNNHKSNLVEILDALIKMECYVDCTIYVDDQVQFKAHRVVLAANSPYFQTILQDVPMDHCSILFPGVQEFEMRALLEYMYTGEVNVTQAQIPRIMKIAEQLEVKGLYDMADLKGRFNKMVDVDHLMRDRDPATTLLASNNNYSSKGSSTAGSATATASSSSWKDAPPTSSSGGISSQFSHHQHQHQSSPVISTSTNISIAQSSSSSPPYSYKSPYSSLYSRSPGAVERDREREERSRDRSSSFSHSATSPHRIQSTSGSSASSVATQIALQSQGGNHQSSTHQSSSSSSSATSASAQPSTAAAAAALAAGWPGLGQTQLHSMLSSAYDSSTDMNPLKRKKLQSMSSMLRDTPILRNVLAQANPADSSQSTGGGVPTGAAATVATIQTIQGSMKSDPERPSSHHSNGSGYKSIKEPSHSPYADKSFDDDLLDSPHNFGGDARLASYVPHQQQKPEWKRYKQYTRTDILNAIECVRKGMSALQASRKFGVPSRTLYDKVKKLGITTGRPINRALKRSPSSSGSPASFPYGLSGASHMFGPGSGAPGSSHPGDHHQQMPSQSQQQDDDASAAAAAAAAAAMAHHEAGRMIKLEHGSHHGLPPTIPHPAAALLDPSFLQQALEARGGDIAGREALHAMAFAAAAHAAVNGMSTSPGTHGTARSPSPSVLMKYMRSVSMSSPEDDRHHPAQQQQQRERDPAEAHPHRDGHHHNGSDPVYARRDHPMEQDSIDETGSECGERPPSGPGPLEGQDDHVEDLSMGHKRDSEERGPSVSPPPSSIVRATQRSRSPSPQPVPPSLPPPQQQGVIVPAPGKLKEDYNIPIKREIIADSNAPSESS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00101774;
90% Identity: iTF_00099760;
80% Identity: iTF_00108497;