Aste007185.1
Basic Information
- Insect
- Anopheles stephensi
- Gene Symbol
- -
- Assembly
- GCA_013141755.1
- Location
- CM023249.1:34001996-34003445[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.6e-10 7.9e-07 28.5 0.1 2 36 243 277 242 281 0.93 2 3 0.0051 8.7 5.9 0.0 23 35 313 325 313 333 0.84 3 3 6.6e-11 1.1e-07 31.2 0.1 4 39 354 389 352 394 0.91
Sequence Information
- Coding Sequence
- ATGGCAAACAAATCTTGCGTGACGTGGACAAACTTTACAGAGCATATGGTGCACGTATACGAAGAAATGCTCGCCACACATCGGTACACCGATTGCCGATTGATCGTGCCCGACGGAGAGCTGCTTGCGAGCCGCACCATACTCTGCATGGCTTCACGATTCTTCGAAACCATTTTCGCCCGCACAGTATATATGGTGGGTTCAGCGGCAGACGTTCCCACGGTACTAATTCCAGACGTGAAGCTGTCGTCTTTACGGTGCGTCCTACAGTTCATCTACACCGGGGAAGTTAATTTACTGCCCTACGATGTAGCACCGTTCGTGGAGGCTTGTAGTTTGCTGCAGATCCGTGGTGTACAGTACGCCGAAGATCGTGTCGTGGGGATTAATTTCGGAACATCTGCCTATTGCTTAGTACGGGAAGGGTCGACCGCTAACAGTGACGGGttggaagcagcagcaaatcttCCACAAGATTGCACACAAGAGAACGTGCAGCAACAATGCACTGCGGTTGTGGCAATGGGCACCCCCAATGATAGTTCTTCTATTGAATACGCGGCTGAATACGAAGCTAAcaatgaaccggaaccggaacacgCACAATACGGACCACCGGACGGGATTAACTCGCTGGAAAACGTCTCCGATTGCAATTCAACCCCGAACGAACGATTGGACGATGTGAAGCCACGGTCAGCCGAAAAGTCCGACCAGGCCAGCTACGAAACTCGTCTCAGTGCGGCAATCGACGCAGTCCTAAATCAAGGTGTTAGCTATCGTCTCGCATCCGAACGGTACAACATCGCAAAGACCGTGCTGTGGCGAAGAACGATGAAAATGCCACGACCGGTCAGATCGAGCTCACCGAAACTTGGCAACCAGCGAAAGGAGGCGATCGATGCGCTGAAAGCGGGCGAAAAGTTAGTCTACGTAAGTCAACGGTACGAGATTCCACTGTCGACGCTGCACCGGGACAAGATACGGCTCTACAACAAGGGTACGTTGCCGGGCATGGTGACGCTGGCACAGCGTGACAAGGGTGAATCGTTTCGGCAACGGTTGACGGAATCGGTGAACGAATGCGTAGCGGGCCGTATGTCGCTGTCCGAAGCGGCACGCGTTTACAAACTACCGAAGACGACCATATGGCGAAGGGTGCGCATGGCGCAGGCGAAAAACAGCTGTTCGGAGGCGAAGGAAGTTGAGCGAACCCTGGAGGCGACGGAACATTGCGCTGAAAGCTCCGCAGAAGAAAACGCTGACCACACCATGGATGTCCGGCAGTGTGAACCGTTGCGGGTAGGAGAAGAATTCTTGTCTGACCCGAATTTGGATATTTCAGGCACAGACTTAACGGATGATTCAATTATGCTCTTCAAGGCATAA
- Protein Sequence
- MANKSCVTWTNFTEHMVHVYEEMLATHRYTDCRLIVPDGELLASRTILCMASRFFETIFARTVYMVGSAADVPTVLIPDVKLSSLRCVLQFIYTGEVNLLPYDVAPFVEACSLLQIRGVQYAEDRVVGINFGTSAYCLVREGSTANSDGLEAAANLPQDCTQENVQQQCTAVVAMGTPNDSSSIEYAAEYEANNEPEPEHAQYGPPDGINSLENVSDCNSTPNERLDDVKPRSAEKSDQASYETRLSAAIDAVLNQGVSYRLASERYNIAKTVLWRRTMKMPRPVRSSSPKLGNQRKEAIDALKAGEKLVYVSQRYEIPLSTLHRDKIRLYNKGTLPGMVTLAQRDKGESFRQRLTESVNECVAGRMSLSEAARVYKLPKTTIWRRVRMAQAKNSCSEAKEVERTLEATEHCAESSAEENADHTMDVRQCEPLRVGEEFLSDPNLDISGTDLTDDSIMLFKA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00108512;
- 90% Identity
- iTF_00108512;
- 80% Identity
- iTF_00108512;