Asin015427.1
Basic Information
- Insect
- Anopheles sinensis
- Gene Symbol
- -
- Assembly
- GCA_000441895.2
- Location
- KE525273.1:272836-274577[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3e-08 5.7e-05 22.5 0.0 2 41 22 61 21 64 0.87 2 2 3.2 6.1e+03 -3.2 0.0 4 18 185 198 185 199 0.80
Sequence Information
- Coding Sequence
- ATGAGTAGTATGTCAGAAGACAGCAATGGCGTCCCGCGTCGTAAGAACTGCAACACGTACACCCGCCAAGACTTGAAGAATGCAATAAATCTGATCGTCGAACGGGGGACCTCCATCCGCCGGGCGGCGTATATGTGCAACGTCCCGAGGACAACGTTGTCGACGTACCTCAAGTCGATAACACACGGGAAAATCAGCAAGCTACATCCGCAGGAGGAGCAGGCGCTGTACCAGTGGATGACGGATTGTTGCAAGCGCGGGTTTTCCATCAAAAAGCGAAACGTCGAAACGGCCGCTGAAGCGTTGGTACAGAAAAGTGTCCCCGCCCGTACGCATCCGTTCCAGGATACCGAGTTCGGGAAACGTTGCTATCAGAAGTTTGTCAAACGATGGGTTACCACCGATCGGCTTAAGGATCGGAAACATCTCGGAGTGATAGCGGACTGGTTCCTGCACATCGAGAGCTACCTGATGGAGTCGAACCTGTTCGAAATACTAAGCCATCCGAACCGAATATTCCTGTGCGACGAGTTGCGGTTCCGGGAGCGAGTCGAAATGCAGGAACCGGTTCGGGCAGTGCTGAAAAAAATGACCATGCTCTACACATTCTCCGCCGCCGGTGAGCATTTGTCGCCGTTGCTGGTGTACCCGTACCGGCGCGATGTGCCACCGGACATAGTGAAAGCCGCACCGAAAAACTGTGCCATCGTAGCGCACGAGTACGGCCAGGTGACCCCGAAGACGTTCGCCGCCTACCTCGACAAGGTGGTAGACAAGTACGTGACGGCAAACAATGTGACGAAACCGGTGATCATTTTCGTCGACGAGTCACAGGTCGATTTGACGTTGCATCTGCACAACACCTGCAAAAGGTTGGGCATCGTACTGCTGGGGCTGACGGCTGCCCAGGTTGTGAAACCGACGGCGAACGTGTTCAACGATATCTGCGCCGGTTGGGAGCAAGAACTGCCAAAGTTTGAAAAGGAATCGAGCCGTTCGTTTACGTTGGCCGACTGTGCCGGGCTAATGCAAACCGTGAACCAGCGCTACATCAAAAGAGAGGTTTTAACGGAAGATTTTAAGGCCAGTTCTTTGTACCCTTGGAATCGACCTATTCGTACCGCTCAGGATACTACCAGTACGATTTCAACGTGCCATAGTAAGGAGCTAACCGAAAAGTTTGAGCGCAAGCTGGAAACTCAAGACCGCTTAGCGCTGACCAATCATGCCGAGAACGTCCTGTATGACATCTATCGACAGTTTCGCTGTGATGTTGTTACCGACAGTGATGATGATTATGATATCGTCGAAATAGGCGATGATTAA
- Protein Sequence
- MSSMSEDSNGVPRRKNCNTYTRQDLKNAINLIVERGTSIRRAAYMCNVPRTTLSTYLKSITHGKISKLHPQEEQALYQWMTDCCKRGFSIKKRNVETAAEALVQKSVPARTHPFQDTEFGKRCYQKFVKRWVTTDRLKDRKHLGVIADWFLHIESYLMESNLFEILSHPNRIFLCDELRFRERVEMQEPVRAVLKKMTMLYTFSAAGEHLSPLLVYPYRRDVPPDIVKAAPKNCAIVAHEYGQVTPKTFAAYLDKVVDKYVTANNVTKPVIIFVDESQVDLTLHLHNTCKRLGIVLLGLTAAQVVKPTANVFNDICAGWEQELPKFEKESSRSFTLADCAGLMQTVNQRYIKREVLTEDFKASSLYPWNRPIRTAQDTTSTISTCHSKELTEKFERKLETQDRLALTNHAENVLYDIYRQFRCDVVTDSDDDYDIVEIGDD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00093984;
- 90% Identity
- -
- 80% Identity
- -