Asin001732.1
Basic Information
- Insect
- Anopheles sinensis
- Gene Symbol
- bab1
- Assembly
- GCA_000441895.2
- Location
- KE525347.1:3872087-3874714[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 2.3 4.5e+03 -2.7 0.1 29 36 177 184 177 191 0.80 2 3 1.2e-12 2.4e-09 36.6 0.0 1 45 426 470 426 470 0.95 3 3 0.019 37 3.9 0.8 4 20 590 605 589 605 0.93
Sequence Information
- Coding Sequence
- ATGGGTAGCAGCGAAGGACAGACATACTGCCTACGATGGAACAACCACAAGTCGAACTTGGTCGAGATCCTGGACGCACTGATCAAGATGGAGTGCTACGTCGACTGCACGATCTACGTCGACGAGCAGGTCCAGTTCAAGGCACACCGGGTTGTGCTGGCGGCCAACTCACCCTACTTCCAGTCGATCCTGCAGGACGTGCCGATGGACCACTGCACTATCCTGTTTCCGGGAGTGCAGGAGTTTGAGATGCGCGCCCTACTCGAGTACATGTACACGGGAGAGGTGAACGTGACACAGGCGCAGATACCGCGCATTATGAAAATCGCCGAGCAGCTCGAGGTGAAGGGCCTGTACGACATGGCAGATCTGAAGGGTCGCTTCGAGGTGGACCATCCGATGGGGGAGCGTGGCGACGCCGGAGCGACTCTATTGGCGAGCAACAACAACTACAGTACCAAGGGAGATCATGCTGCCGGTGGACCAGCGACTGCTTCCAGCTCATCTCCGCCATACTCGTACAAGTCGCCCTATTCGAGCCTCTACTCACGCAGCCCTGGCACGGTGGATCGAGATCGCGAGCGAGAAGAACGTAGCCGTGACCGCTCGTCGTCCTTCTCACATCCCGCAACCTCACCACATCGCCATCCGTCCACGTCCACCTCTTCGCCATCGTCCGTATCGGCTCAGATCGCATTGCAGGCTCAGGCAGGATCCCACTCCGCCTCATCCCACCAGTCCGTGGGTGGATCGTCCAGTGCTACTTCTATCTCGGTGCAACCTTCGACGACGGCTGCGGCGGCTGCGGCACTGGCAGCCGGCTGGCCCGGACTTGGACAGACTCAATTGCACAGCATGCTCAGCTCGGCTTACGATTCCAGCACCGATATGAATCCGCTCAAACGCAAGAAGCTCCAGTCGATGTCTAGCATGCTGCGCGACACTCCGATCCTTCGCAACGTGCTGGCTCAGGCGAACCCGGCTGATTCCTCGCAATCCGGAAGCGTAGGCGTAGTTCCAGCTGGATCGGCTTCTGGCTCCGTAGCAACGATACAGACGATCCAAAAGTCATCCGACCCCGATCGTCCCAGCAGTCATCACTCCAATGGCAGTGGATATAAGTCAATCAAGGAACCCTCGCATTCACCCTACGCCGATAAGTCGTACGATGACGACCTGCTGGACTCACCGCACAACTTCGGTGGAGACGCACGGCTCGCCTCGTACGTGCCTCATCAACAGCAGAAACCAGAATGGAAGCGCTACAAGCAGTACACCCGAACGGATATCCTGAACGCGATCGACTGCGTGCGGAAGGGCATGAGTGCGTTGCAGGCGTCGCGTAAGTTTGGCGTACCATCGCGTACCCTTTACGATAAGGTGAAGAAGCTGGGCATCACCACCGGTCGTCCGATCAACCGATCGCTCAAAAGGTCACCTAGTTCGGGCGGTAGTCCGGCTTCGTTTCCTTACGGGTTGAGTGGCACGAGTCATATGTTTGGACCTGGGGCTGGAGCTCCCGGAGGCGCCTCACATTCCGGCGACCATCACCATCAGCAGCTGCCGTCACAATCGCAGCAACAGGACGACGAAGCAATGGCTCACCATGAAGCTGGGCGTATGATCAAACTGGAGCACGGAAGCCACCATGGCCTCCCGCCGACCATCCCTCACCCTGCCGCAGCCCTCCTCGATCCGTCGTTCCTACAGCAGGCCTTAGAAGCGCGTGGAGGCGACATAGCGGGACGTGAGGCGCTTCATGCGATGGCCTTCGCTGCTGCAGCTCATGCGGCCGTCAATGGAATGAGCACGTCCCCGGGAACTCACGGAACGGCTCGCTCCCCTAGCCCGAACGTGCTGATGAAGTACATGCGGTCCGTTTCCATGAGCTCCCCCGAGGACGATCGCCATCATCCGGCCCAACACCAACACCCGCAGCAACATCGCGATCGAGCGATGGCCGAAGGACAACCCCCGGTCGATGGTCGACACCACAACGGATCGGAAACAGCGCCGGCATCGACGGCAGGGTACGGCAGACGACAGGATCATCCGATGGAGCAGGACTCGATCGACGACGCCGGAAGTGACTGTGGTGGGAGGCCCAACAGTGTTGCACCGGCAGAGGAAGGGCAAGACGATCACGTCGAGGACCTCTCGATGGGAACGAAGCGCGACTCGGAGGATCGAGGTCCGTCCATGTCGCCACCGCCTTCCCATCGTGCCTCCCAGCGATCACGATCACCATCCCCTCAGGCGCACGCACAACCACCACCTCCACCACAACCGCAGCAACAAGGTGTGATAGTGCCAGCTCCGGGAAAATTGAAGGAGGACTACAACATCTCTATCAAACGAGAAATCATCGCTGACAGCAATGCACCGTCGGAGTCATCGTAG
- Protein Sequence
- MGSSEGQTYCLRWNNHKSNLVEILDALIKMECYVDCTIYVDEQVQFKAHRVVLAANSPYFQSILQDVPMDHCTILFPGVQEFEMRALLEYMYTGEVNVTQAQIPRIMKIAEQLEVKGLYDMADLKGRFEVDHPMGERGDAGATLLASNNNYSTKGDHAAGGPATASSSSPPYSYKSPYSSLYSRSPGTVDRDREREERSRDRSSSFSHPATSPHRHPSTSTSSPSSVSAQIALQAQAGSHSASSHQSVGGSSSATSISVQPSTTAAAAAALAAGWPGLGQTQLHSMLSSAYDSSTDMNPLKRKKLQSMSSMLRDTPILRNVLAQANPADSSQSGSVGVVPAGSASGSVATIQTIQKSSDPDRPSSHHSNGSGYKSIKEPSHSPYADKSYDDDLLDSPHNFGGDARLASYVPHQQQKPEWKRYKQYTRTDILNAIDCVRKGMSALQASRKFGVPSRTLYDKVKKLGITTGRPINRSLKRSPSSGGSPASFPYGLSGTSHMFGPGAGAPGGASHSGDHHHQQLPSQSQQQDDEAMAHHEAGRMIKLEHGSHHGLPPTIPHPAAALLDPSFLQQALEARGGDIAGREALHAMAFAAAAHAAVNGMSTSPGTHGTARSPSPNVLMKYMRSVSMSSPEDDRHHPAQHQHPQQHRDRAMAEGQPPVDGRHHNGSETAPASTAGYGRRQDHPMEQDSIDDAGSDCGGRPNSVAPAEEGQDDHVEDLSMGTKRDSEDRGPSMSPPPSHRASQRSRSPSPQAHAQPPPPPQPQQQGVIVPAPGKLKEDYNISIKREIIADSNAPSESS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00101774;
- 90% Identity
- iTF_00107779;
- 80% Identity
- iTF_00107779;