Asin014195.1
Basic Information
- Insect
- Anopheles sinensis
- Gene Symbol
- -
- Assembly
- GCA_000441895.2
- Location
- KE524237.1:35330-36816[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.1e-12 4.1e-09 35.8 0.1 3 38 293 329 292 335 0.89 2 2 0.002 3.8 7.1 0.0 23 35 362 374 361 381 0.85
Sequence Information
- Coding Sequence
- ATGATGGCGGTTACAATCAAATCAGCCATTTCGAGCGTGAAATGGGACAAGTTCGGTGAACACATGCTACGCATCTACACTGGAATCTACGAACATCTGCAGTATACCGATTGCGAGCTGGTTCTCTCCGATGGCCATCTGCGAGCCAGCAGAATGGTGCTTGGAATGGCTTCTTCATTTTTTGAAAACATCTTCCAAGCCACAATCAATCAACCGGTTTCAGGAACTGATCTTTTAAAGGTGCTGATTCCCGATGTTACCGTCAGCAGCATGCAGTATGTTTTGCAGTTCATCTACACGGGAGAGGTTAAACTGCGCGCGGAGGATATGTCCTCGTTTCTCGATGCCTGCTACCTGCTGCATATACGCGGGGTTAATAGTAACGATGGACGAGTACAGGGGGCGAGCATCGTTGATCAAATTCCCGCAACGGTTGAACTGTCGGATGATGTTGAACCAAAATCTACATCCGACTCAACCTCGTACCTCATGTCTGTGGTGCATTCGGATGATATAGAACGCAGCGTGGTGGCAGTGGAACAACATCAAGCATTCGGTTCGGCAATTGAGCAGATCGTCTTTCAAGGAACCGTGGTTAGGGAAGTTCATGAAGATTCGTTTCAAAACATCAAGGATCATGCTGTTGAGGAGCAGTCTTGTGCTCAATATTATGACCTAACCGAAGACGATGGACCACACCAGGACGGCGGCGATGATGTAACGGACGAGCAAACTTTCGATGAAACGGTAAACCTTTCCTGCATTGAAAAGTTCATGGCGGACGAACTGGAGGACATGGAAAGCCCTAAAGATGATTCGGGAACGGTGGACAAGGAGTCATCCAAAGAAAAGGAATCCACTGCGCCTAGCTACGCGGAACGTTTGGAAAAGGCGGTCGATGCCGTCGTTAACTCTGGCGCTAGTTTTCGGCAAGCAGCGGTAGCGTACAATATCCCAAAAACGGTCCTATGGCGCAAAACGGTGAAAATTGCTCGTCCAGCCAAACCACACCAGTACGAGTTTCCCAGTCCACGGCGGGAAGCAATGGAAGCGATAAAGGCTGGAGAAAAGCTGCTAAACGTGAGCCGGCGGTTTGACATTCCCATCTCGACGCTGCACCGTGATATGATCCGTTTGTACAGCGAAGGGGAGCTGCCGGACACGGTGGCGTTGAAGCAGCGCGATAAGGGGGATACGTTTAAGCAACGGGTCATCGAGGCCGCACAGAAGTGCTTGTCGGGCAGAGAAACCTGCAGCTGCCAGTGA
- Protein Sequence
- MMAVTIKSAISSVKWDKFGEHMLRIYTGIYEHLQYTDCELVLSDGHLRASRMVLGMASSFFENIFQATINQPVSGTDLLKVLIPDVTVSSMQYVLQFIYTGEVKLRAEDMSSFLDACYLLHIRGVNSNDGRVQGASIVDQIPATVELSDDVEPKSTSDSTSYLMSVVHSDDIERSVVAVEQHQAFGSAIEQIVFQGTVVREVHEDSFQNIKDHAVEEQSCAQYYDLTEDDGPHQDGGDDVTDEQTFDETVNLSCIEKFMADELEDMESPKDDSGTVDKESSKEKESTAPSYAERLEKAVDAVVNSGASFRQAAVAYNIPKTVLWRKTVKIARPAKPHQYEFPSPRREAMEAIKAGEKLLNVSRRFDIPISTLHRDMIRLYSEGELPDTVALKQRDKGDTFKQRVIEAAQKCLSGRETCSCQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00096298;
- 90% Identity
- iTF_00096298;
- 80% Identity
- iTF_00107792;