Basic Information

Gene Symbol
ARID5B
Assembly
GCA_000441895.2
Location
KE525347.1:1012955-1045689[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.8e-12 1.2e-08 35.0 0.0 2 89 1045 1125 1044 1125 0.89

Sequence Information

Coding Sequence
ATGGGGAAATATGTCCTATTCGCTATTTTATTCTTCAGTTCTCTCGTCACTGGCAATGTTATTTCCCGTCCATCCTATGGCGAACAGTTAAAATCATACGATAACGGTGAGAGTGAATCGCTTCAAAGCTCCTGGTACCGGACGGCATCGGAAGAGAATGACGATTTGCGGCTGCTCGGTGTACGAAAGGAAGAGGTGCCGGTCCTGCTGGAGCTGTACTACCTCGTGAAGGTGCTGCAAGCCTATCGAGACCCAAACAGCTGGGGAAGCTACAACCTAAACGGTGCTATCGAACGTATTACGGATACAGAGGTTGTCGAAGGATTGGAGAAGTTGCTCAAAAGGCAGAGAGCATTTCAGGAGATCTCCCTGATCGGGGCCGAAGGAACCGTACCGGATCCACTGCAGGTACAACTGGCGAACGACGAGCGGTTGCTGTATCCCTTCCTGATCCGTACGCTGAGGAAGGTGCTGGGCTTGAAGAAGACCGGAGCAATCATTTTGCTCGACGATAAGGATGATTTTCTGGGAGCTCTGCTGCTTGATATGCAGCAAGAATGGCAAGTTCTTCGAGCCGTTAGAGTACTGAAAGAAGACGAACTGGTTGGCGTTGTACAAGAGGTTCCTAAGAAACAGGACAAGCTGAACTTGGAATCGGATAACTCTGGAGAGGAGACTCTAGCAGGCGTGGAAGAAGATGGCACTCCAACCAAGAATAGCGATTTGGAGAAATTACCACTCGATCCAGTGGTGTATAACGTCGAGGATCCAGTTGAAATCGATGCTGGTGAAGATATCGGAAATTTGATGTTTGAAGGATTGCCAGGCGATGCTGCTGAAGAGACGTCGACGCATGCTCCAGCTGAAACAGGACATCAGGATATAGAGGATCAAGCGCGTAGGGACCACAACCGAGGATCACAACATCCGGGAGCTGTCCTTATCATTCAGCAAACGACAACGGTTACGGAATCTCCCCCTCCACGTCCAGCGGTCCGTCCCAGCAGTCCCCTAGTCGTCTACAAACCCGCGCCATCGTCGCTTTCCACCCCGACCGCATCCCAGCTCCAGGTCAACCAGATCGCAACGCAAGCCGACAAGGTAGCCATCGATCTGATCGCATCCGAGCTGGACAAGTTCATACGAGTGGTCGAGGAGCTCTCCGGGGTGGACGATCTCTCCAAGCAGCTAGATCTTTTCGACCGCACCCGAATGGTCGGTTGGATCAAGCAAAGTTACGTGCCAACGGTTGGACTGGACCAGCGGGACTTCATCAGGGCGATGCAGCGACTGCTGAAGACGAAACCACCGAATGCAGGTCGGCGCGATGTGCTCGATACGCTGCAGTACCTTAAGGTGCAACTGGACCGCGATGATCGGACGAAGGCAGACGTTGAAGAGGATGTATACGATTACTTTAAACGCGTTTACGGTGATCAAAAAGAAGGCGACTTCGATGTCGTCGGCGGACCCTGCGGCTACCATGGGTCGTACACGTTCTACAAGGGCGTCAAAATTACGTTCGGCACGAGCGGCACCTCCACCTCCACCACCGACCCATTGTCGTCGTCCGCCTCCTCCTCCGTATCGGCGCCGAGTCCGAACGGAAAGCCCACTGCCACTAACACTACCTCCGCCAACGGTCACAGCAGTTCCGGTGACATTCCCGGTGTCGGTGGGGAAGCGACGGCGGCACCTGATGGTGATACACCGTCTGAAAATGGTAATGGCGTTGGCGGTGGTGTGGGTGGAGGCGTTGGCGGAGGTGTGTCGGGTGGCAGTGCTGCCAGCAGCAACGGCACTGGCAGCAGTACCAAAGCTGGCAGCAATAATTTATGCGGAACGGCGTCGCTGGATCGAGACAACCTCCGACCGCTGGTGCTGGCGCTGGGCGACTGCATTCCGGTTCGGCCGTGGTCCGACTCGCCGATCGCGTGCCTGGCCGAGCTGCGCATGGTCTGGCGGGACCGGAACGAGCAGTGCCTGCTGATCGCCCTCCGGCTCTACTTCCTGCCGGAAAACACACCGAACGGCCGCAACTGCCACGGCGAGGACGAGGTGCTGGCAATCTCGGACAAGGTGATACTGCGGGCGGAAGATCTGCTGAACTGGATCGACACCGACCAGGAGTGGACCTGGGGCCTGCTGACGATGTACAACGAGTCCAGCGCAAAGGACTGCCTCGGCACGACGCGGCATCTCAGCAAAAACTCCTCGCTCGATTTTGGCGACGTGGACCGGGAGAAGCATATGGGTGAAAGTATCGTATCGAGGGTGGCGGTGCTGAGTTTTTCGCGGTACTGTCGCTACCGGGCGATCCTGAAGCGCCTCGAGGGCGTTAATGATGCGTGGCTGCGGAACACGCTGGTCGAAACGCTCGGCGGGTTCGTGGCGCCCGCGCCCAACATGCGCATCATGTTCTGCAAGGAAACGTTCGACTATCCGGAGCTGGAGACGCACGAGCTGCTGTGCAATCATCTGGCGCCGAAGCTGAAGGGCCGACCTCGTGGCAAGCGGAAGAAGACACTGTCCGATTCGTCGCAGTACACGAAGAAGGAGGGCTGTTCAGATGAGAGCGAATCGAACGAGTCCGATGTGTCGGATTATTCCTACAGCAAGGTATCTCCTGGCAAGAAGGTGATAGATCTTAATCCAACACCTCGCTACAACCCGCGACCCTCCCGGGGGTCATCACAGACGAAACAGGAACCGATCAGTGTGGTCATATCCGCGTCGGCCGGTACGGTCAAAGCCAGCACAACCGCCTCCAGTCAAGCGAACCACCTTTCCCAGCGCAACCGTTCCAAGTCCACCACCTCGAAGTCATCCGGCAAGTCGTCGAAGAAATCGAAATCATCCTCCAAAGCGTCCAAAAAGTCGGGCAGGGGTAGAAAGCCAGCCTCGGCGACTCCGGCCGCCGGACAGGACGAGTCGGACGAGGACGAAGAGGAGGCGGACGAGGATGGCGAAGAGGAATCGTCATCGGCACGGGGCGGCTCGAAGGATCGCGATCGGGCCGATGACGATGGGGACGAGGAGGAGAGTGGAGATGAGGAAGAGGTCGACTACGAGGAGGACGAGGAGGAAGAGGATGACAATCTGTTCCGGGTGAACGAGCGGATGAGCAGTGGCGAGAAGGAGTTCCTCCAGCGGTTGCAGGAATTCCTCGACCCGAGGGCGCTCCAGTATGCGGACAGTCAGGCGGCATCGTTGAAGGGTGTGAGCCTCTACGCGGTATACGCCAAGGTACAGAAGATCGGTGGATACAATTCGGTGACGGATAAGGACGTCTGGAATCAGCTCCTACAAGGAACGGGTGGTGAAAACGGTGTGCTTAGTCGGAGAAAGTACGAAAAGATTGTGCTTCCATTCGAGAAGCACCTGAGAGAGCAAGCGGCCGACCAGCAGGACGTGAAACGGGAGTCCACCCTGCTCTTGTTAGGGGACGAGGAGCTGGAAAGTAAACTACGAATGCTGAAGGACGTAAAACTGGAAAAGTACGAGCAGTTCGATGATCGGGGAAGTGGCAAGGACACTAAGCCAAGTGACGCCGGACTGCTCGATTACTCGGTGAAGCGTGAGTTGGTGGAAAAGGATGAGTTCTTCGGCCAGAAGGATGGCAACAGTAGCCCCTCGAACGGGGTACACCTTGGAATGTCACCGGTTTCGGTGCCATTGACGGTGATCGTGCGGCCGAACTTGGACGAAAAGGATCAAAAGTCATCGCAGATACAGATAAATCAACCACACACGACGATCACCGTACATCAGACGACGATCCATCCGCAGAACAGTGGCAACCATCATCATCAGGCGACGGGTAATCATCATCATCACCACCATCACCATCACCATCAGCATATGCAGATCAGTGGTCAGAGTCCGCAGCATATTACGAACCAGATACAGATAACGAACCAGATTCAGATCCAGCAGATCACGGTCCAATCGAGTGAGGCGAAGAATGGTGGGTCGGGTGGAGGTCCCACCGGAGGATCGTCCTGTGGTAGTCCCGGAGAAGCATCCGGAGGGCAGTTTAAGTACAGCTTCAAGCAGGACAAGTCGGGCCAGGAGTTAAACATCGAACCGGTGGCAACGGCACCCAAATCGGTCACTTCATCATCCACTCCGGTTGGTTCACCGTCGGAAGGTAGCCACACATCGTCGCTGAGCCTTTTCCCCCTCAACCGGCAGGGAACGGACCCGGACCTAACGATCAAGGAGGTGTCCGTGTGTCCAACCAGTGGAACGCTTTCGATCACTTCCAGCGCGTGCATTCCCTCGTCGGCGTCCGGGTTGAATACGCCCTCGAAGACGAGCTCATTGCGGCACGTCCGCATGAAGAACGATCGCAAGGGAAGTCAATCGAATCCGAGCGGTGGATTGCTTATGGATGGTTCGACGGCAGGCGGTGGCTTTGGGATGGGTGCTAGTCAGAAGGAAAACATTCCGCTACTCGGAACCGGTTCGACCAGTCTTTTCGGTGGTCAAAGCCTGACGACGATCACTCCGATTCCGGCGAACATGACCGGTTCGGGGTACCTTGGGTCGGTTTCCGAGGTCGGTGGAACCGGTGGCCATCACCATAACCCTGCGGGTTCGAAGCCGGGTGGGGCGCCTCAACCGACGGAAGTGATCGATCTGGTGGACAGTGATAATGAAAGCGATTCTGCTCCCGGATCGGCCGGAAACGGAGGGCGGAAGCAAGCGGGACAAGCAATGCGTCCGATCCCTTCACTCCTTCCCCCGATGAAGAAGCGCAAGTTGGACATCCTCCGGGAAGGTGGCCTCGAAGTGACACCCATTTCGAATGGTTCCAGTTTGTTCACCTCGCTCGTGCAGAAGAATGCTTCGACGACACCGACGTCCCGCCCTGCACCGAACCCGATGCGTATAAACATAACGGCGGAGTTGAACACCCCCGGAGCACCCCACCACCGTGCCTCGGACGGGGGAAAAAGTGGCCGCGAGCCGCGTAAGTGTATTCCGACTCCGCTCGAGTTCCAGACGCACTGCATGTACACCCGCACCGGGAAAGTGTTTGGCGATCCGAAGGAACTGGTACCACCGCGTGCTCCCGCACCGGCTCCGGACCTGCTCGACCTGACTGGGCCGAAACCAATGGGTGCTGCGGTGGCCAATTTGTCCACCAAAGGTGCTCCCACGACGATGGACTTTTCGGCCGGAAGTTCCCGCGTGAACAACAATCGACAGCAAGCGGGAGTTCCGTCGGCAGGTTCCCGGACCGCACCGAGTTTGCAGATAACACTCGTCCCTGGGCCGACGAACAACCAACTGCCAGCACCCCACCACGGTGGTCTTCCGCCCATGATGACACCGCTTAACATTCCCGTCCCTGTGCCGAGCAGTCAGCAGGCATTGTCGGCAGCTTCCGCCTCGCTTCCTGCCGGCACGATGGGACACAAGAAAACGAAACCTTACGAAATAGTGCCATTGAGGGATGGAGCCGCGATGGGGCAAGGTGGTGCGATGAAGGAACCGAGTCCCAAGGTGACCATCGGGCCATCGTCGGGATCGTCCGGTTCGTCCACCTCCACCAATGGGACGATTCCACCCGGTCAGCAGCTCGGACTTGCGCCCGGTGCATCTCCAAACGCCCTCCTCGAAACACTTGCGAACCTTCAGCGGGCAAACCCGGTCCTGGTGGCGAACATTCTCTCCTCATCCGGTCTCTCGAAGTCATCCATTCCGGGACTTACGCAACTCCTCGGTACGTTCGGTGAGTCGGCGTTGGTGCCACCGAAACCGAAAACTCCCCGACGGCGTTCGAACTCCCAAGCGCAGTCCAACGCAGCGGCTGCGGCGGCGGCGGCAGCGGGGGCAGTGGGTGGTACTCCCCCAGGTGCAGGTGGAAGTAGGCCACCATCGACCAACAACAACAACGTTCCAACTTCACCCTTCTCCGTGCCACCCGGTGTTCCAATGGCCGGCGGCTTGAGCGTTCTTCCAACGTCCGTCCTACAGGGACCTCCGCCAGCCGGTTCCCCGCAGCATCCACCGCAAGCCGACTCACCGAACTCCTCCTACCCGCTGGACCAGCAGATCAAACTTCTCCAGCAAGTCCAACTACAGCAGCAGCAAAAGTACCTCCAGCAGAAGGCCTCCGAGGAGCAGCAAAAGCTTCACCTGCTCGCCCAATTCCAACAACAGCAACAACAGCAGAAGCCACCGAGTCAGGTTTCACCGGCGGCATCCCCCTCGACAGTCGGATCACCCCACACGGCCGGAACACCACCCCTATCGCATCCATCGCCACCGACGCTTCCGACGATGCCACAGCTACCACCGCAGGTTCAAGTTCCTCGGCTTCCCGTCGTGCCACCACCGTCTGCAGCAGCCGCCGCGGCCGCACTCTTCTCCGCCGGACTTCCACCGGGTGCGGCCGCCGCCGCCGGAGCCTTCCCACCCTTCGATCCGATCTATCTACAGCTGTACGCGGCCAACTCGGGCCTCTACCTGCCACCAGAGCAACTGCTGCAGCTCTACAAGACGCTCCCGCAAAGCATTCCTATCAGCAAGAGCTAG
Protein Sequence
MGKYVLFAILFFSSLVTGNVISRPSYGEQLKSYDNGESESLQSSWYRTASEENDDLRLLGVRKEEVPVLLELYYLVKVLQAYRDPNSWGSYNLNGAIERITDTEVVEGLEKLLKRQRAFQEISLIGAEGTVPDPLQVQLANDERLLYPFLIRTLRKVLGLKKTGAIILLDDKDDFLGALLLDMQQEWQVLRAVRVLKEDELVGVVQEVPKKQDKLNLESDNSGEETLAGVEEDGTPTKNSDLEKLPLDPVVYNVEDPVEIDAGEDIGNLMFEGLPGDAAEETSTHAPAETGHQDIEDQARRDHNRGSQHPGAVLIIQQTTTVTESPPPRPAVRPSSPLVVYKPAPSSLSTPTASQLQVNQIATQADKVAIDLIASELDKFIRVVEELSGVDDLSKQLDLFDRTRMVGWIKQSYVPTVGLDQRDFIRAMQRLLKTKPPNAGRRDVLDTLQYLKVQLDRDDRTKADVEEDVYDYFKRVYGDQKEGDFDVVGGPCGYHGSYTFYKGVKITFGTSGTSTSTTDPLSSSASSSVSAPSPNGKPTATNTTSANGHSSSGDIPGVGGEATAAPDGDTPSENGNGVGGGVGGGVGGGVSGGSAASSNGTGSSTKAGSNNLCGTASLDRDNLRPLVLALGDCIPVRPWSDSPIACLAELRMVWRDRNEQCLLIALRLYFLPENTPNGRNCHGEDEVLAISDKVILRAEDLLNWIDTDQEWTWGLLTMYNESSAKDCLGTTRHLSKNSSLDFGDVDREKHMGESIVSRVAVLSFSRYCRYRAILKRLEGVNDAWLRNTLVETLGGFVAPAPNMRIMFCKETFDYPELETHELLCNHLAPKLKGRPRGKRKKTLSDSSQYTKKEGCSDESESNESDVSDYSYSKVSPGKKVIDLNPTPRYNPRPSRGSSQTKQEPISVVISASAGTVKASTTASSQANHLSQRNRSKSTTSKSSGKSSKKSKSSSKASKKSGRGRKPASATPAAGQDESDEDEEEADEDGEEESSSARGGSKDRDRADDDGDEEESGDEEEVDYEEDEEEEDDNLFRVNERMSSGEKEFLQRLQEFLDPRALQYADSQAASLKGVSLYAVYAKVQKIGGYNSVTDKDVWNQLLQGTGGENGVLSRRKYEKIVLPFEKHLREQAADQQDVKRESTLLLLGDEELESKLRMLKDVKLEKYEQFDDRGSGKDTKPSDAGLLDYSVKRELVEKDEFFGQKDGNSSPSNGVHLGMSPVSVPLTVIVRPNLDEKDQKSSQIQINQPHTTITVHQTTIHPQNSGNHHHQATGNHHHHHHHHHHQHMQISGQSPQHITNQIQITNQIQIQQITVQSSEAKNGGSGGGPTGGSSCGSPGEASGGQFKYSFKQDKSGQELNIEPVATAPKSVTSSSTPVGSPSEGSHTSSLSLFPLNRQGTDPDLTIKEVSVCPTSGTLSITSSACIPSSASGLNTPSKTSSLRHVRMKNDRKGSQSNPSGGLLMDGSTAGGGFGMGASQKENIPLLGTGSTSLFGGQSLTTITPIPANMTGSGYLGSVSEVGGTGGHHHNPAGSKPGGAPQPTEVIDLVDSDNESDSAPGSAGNGGRKQAGQAMRPIPSLLPPMKKRKLDILREGGLEVTPISNGSSLFTSLVQKNASTTPTSRPAPNPMRINITAELNTPGAPHHRASDGGKSGREPRKCIPTPLEFQTHCMYTRTGKVFGDPKELVPPRAPAPAPDLLDLTGPKPMGAAVANLSTKGAPTTMDFSAGSSRVNNNRQQAGVPSAGSRTAPSLQITLVPGPTNNQLPAPHHGGLPPMMTPLNIPVPVPSSQQALSAASASLPAGTMGHKKTKPYEIVPLRDGAAMGQGGAMKEPSPKVTIGPSSGSSGSSTSTNGTIPPGQQLGLAPGASPNALLETLANLQRANPVLVANILSSSGLSKSSIPGLTQLLGTFGESALVPPKPKTPRRRSNSQAQSNAAAAAAAAAGAVGGTPPGAGGSRPPSTNNNNVPTSPFSVPPGVPMAGGLSVLPTSVLQGPPPAGSPQHPPQADSPNSSYPLDQQIKLLQQVQLQQQQKYLQQKASEEQQKLHLLAQFQQQQQQQKPPSQVSPAASPSTVGSPHTAGTPPLSHPSPPTLPTMPQLPPQVQVPRLPVVPPPSAAAAAAALFSAGLPPGAAAAAGAFPPFDPIYLQLYAANSGLYLPPEQLLQLYKTLPQSIPISKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-