Aqua011769.1
Basic Information
- Insect
- Anopheles quadriannulatus
- Gene Symbol
- -
- Assembly
- GCA_000349065.1
- Location
- KB667445.1:844499-846148[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.25 3.4e+02 0.5 0.0 3 14 217 228 216 231 0.88 2 4 4.4e-07 0.00059 19.0 0.2 4 36 282 315 280 318 0.87 3 4 0.00015 0.2 10.8 0.0 21 42 348 369 335 371 0.85 4 4 6.8e-12 9.1e-09 34.3 0.0 4 38 391 425 389 430 0.94
Sequence Information
- Coding Sequence
- ATGTCCTGCACCTTTTCACAGCAAATGGCGAACAGCTCCTGCCTGACGTGGCTCAACTTTCGCGAGCACATGCTAAACACCTTCTGCGGAATCTACCGCACGCAGCAGCACACCGATTGCCGCTTGATCGTACCCGACGGTGAGCTGTACGCGAACCGTCCGATCCTGTGCATGGCATCCAGCTTTCTGGAGACAATTCTGGACGGTCTGCCTACCATCGGTGCGGAAATGGTAACGATTGTAATACCGGACTTGACGCTAGCGACGTTACGCGCCGTCCTGCAGTTCATTTACACCGGGGAAGCAAGCGTACGGTCGGACGAAATGGCATCGTTTGTGGAGGCCTGCAGCTTTCTGCAGCTGCGCGGAGTGCGTTTTATCGCGGATCAGATTGTGGGCATACGATTCGGCAAGACTGTTGGTATGGTGTCGGAGGAGCTCATTCCTGCCAGCGATGGTTTGGAAGCGACGGCATGCCCAAGGGAAGAATTGTTCGTTGCGCAAGTGGAGGACCAGGCAGAAGAGAATGAGGAGGAGGAGGAGGAACGAAGAGAAATGCCCATAACACAATCACAGGTCCAACCTGTTGAATGCCTAATTCCAGAATCGAGAGAATCAGTCCAAGAACACGTTGAAAAAATTCCACAGGAACGGTTAACGCAAGCAATTGAAGCAATTATAAAGGACCACGAAAGCTATGAAATCACATCCGTACCTTGTCCAATCGACACCACCGTCCCAACCCCGTCGGAAACAAATACAACGAACCTTCCGCCGTTCGAAGATGAGCTGGAACAAGCAAACCCCGAACCACCACTATCCGACCCTGGCAGTTACGATGCACGGCTTGCGTTGGCAATGGATGCAATCCTTCACCAGGGCATTAGCTACCGGATTGCCTCCAGGCAGTACAGCATCGCTAAAACGGTACTGTGGCGCAAGGCTATGAAAATGCCGCGACCGGTTCGGGCTGGCTCCCCGAAGCTGAGCGCCCAACGGCGGGAAGCGATCGATGCACTGAAAACGGGCGAGAAGCTCGCACACGTAAGCCGACGGTTCGAGATTCCGCTGTCGACGCTGCACCGGGAAAAGCAACGGCTGTACAGCAAGGGCGCACTGCCGAGTAATGTGTCGCTGAAGCTGCGCGGTAAGGATGAGTCGGTGCGGAAGCGGTTGCAGGAGGCGGTGGGTGACTGTGTGGCGGGCAGGATGTCACTGTCCGAGGCAGCCCGGACGCACGGCCTACCGAAGACGTCCATCTGGCGCAGGGTACGATCGCTACAGACCAGTGGCTGCAGTAGTAGCAGTAGTAGCGGAATGAAGGAGGAGAATTCTGCAAGCGACGCAATGGCAGAGCGACCAAATCAATCGGAAGAGGCTGAGGTGGAGGAGGATGATGATGATGATGCTAAGCTAACGATGGACGGCATCCTGTTAAGGGGGAATGATACGCTTCAGGTTGGGGCAGGATATATGTCCGATGAGAATATTTCGGCGAGCGATTTAGCGCAATTAAGATATCAGCTGACCTCGAACTATGACCATCACGTATTGAATGATAGTTTATAA
- Protein Sequence
- MSCTFSQQMANSSCLTWLNFREHMLNTFCGIYRTQQHTDCRLIVPDGELYANRPILCMASSFLETILDGLPTIGAEMVTIVIPDLTLATLRAVLQFIYTGEASVRSDEMASFVEACSFLQLRGVRFIADQIVGIRFGKTVGMVSEELIPASDGLEATACPREELFVAQVEDQAEENEEEEEERREMPITQSQVQPVECLIPESRESVQEHVEKIPQERLTQAIEAIIKDHESYEITSVPCPIDTTVPTPSETNTTNLPPFEDELEQANPEPPLSDPGSYDARLALAMDAILHQGISYRIASRQYSIAKTVLWRKAMKMPRPVRAGSPKLSAQRREAIDALKTGEKLAHVSRRFEIPLSTLHREKQRLYSKGALPSNVSLKLRGKDESVRKRLQEAVGDCVAGRMSLSEAARTHGLPKTSIWRRVRSLQTSGCSSSSSSGMKEENSASDAMAERPNQSEEAEVEEDDDDDAKLTMDGILLRGNDTLQVGAGYMSDENISASDLAQLRYQLTSNYDHHVLNDSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00102480;
- 90% Identity
- iTF_00107101;
- 80% Identity
- iTF_00107101;