Basic Information

Gene Symbol
Xbp1
Assembly
GCA_000349065.1
Location
KB667210.1:49199-50233[+]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 8.4e-15 6.4e-12 44.8 10.6 2 63 75 136 75 138 0.95
2 2 5.6 4.2e+03 -2.7 7.0 28 56 136 166 133 170 0.83

Sequence Information

Coding Sequence
ATGGCTACCCCAATCTTTATCACCGTACCGACCAAGTACATCCCCATTAACGTGGCTCCGGCGGTGGTGGCCAAACCGCCGACCAGCATAACACCGGTCAAACCGTTGGCCAAACGGCCTGCCTCGGTTGCTCCGTCGTCGGTGGCCTCCGACGACGAATCCTCCTCGATGGATGAGTTTATCGTACGCGGCAAGAAGCGCCGCCTCGATCATCTCACCTGGGAGGAGAAGATTCAACGGAAAAAGTTGAAAAACCGTGTCGCAGCCCAGACGTCGCGCGACCGGAAGAAGGCCAAAATGGAAGAAATGGAAAAGACGATCCAGGAACAGTCAGAACAGATCGAGCAGCTTCAAAACCGGTGCAGCGCACTGGACACAGAGAAGAGCTCCATGTACGACAAGTATCTAGACCTGGAGCGACGGTTCGAGGATCTGCAGAAGCGCTTGCTGGCACAGGAATTGCAGCAGCAGCAGCAGCACCAAGACCAGAAGGTGAAGCAGGAACCGCAGGAAGATGACGTCGTCAAGGGTAGTGTGGGTTGCGTTACTGCCGGGCGCCAAACGGGATCAGCAGCATCCCCACGATGCCCTCAGCAGCAGGGACTGTACAAGTGCGGTCCGGCGGAAGCGCAAACGACACTCCCCTCGACGGCGAGCAGCGACCCGCGGCTGGCAGCCCTCTGGAAGATCATTGCCATCTGCCTGCTCTACAAGACATGTTCGAAGATTTCGACATGTCCCAGCTCGAAGAGCTTGCCGAAAGCCTGCTCGCAGGTGTCGGCGCAGACCTGGAAGACATTGATCGAGCAGGCCGCCCGGCTAATGCCGAAGGCGACCGCACCGGCCAGCGCCTGTCTGGATCAGTGGTGGGGCCCGCAGCAAAACTCCTGGAATCCGGTCGACCGGAGACCCCTACGGGAAATCGCCTAA
Protein Sequence
MATPIFITVPTKYIPINVAPAVVAKPPTSITPVKPLAKRPASVAPSSVASDDESSSMDEFIVRGKKRRLDHLTWEEKIQRKKLKNRVAAQTSRDRKKAKMEEMEKTIQEQSEQIEQLQNRCSALDTEKSSMYDKYLDLERRFEDLQKRLLAQELQQQQQHQDQKVKQEPQEDDVVKGSVGCVTAGRQTGSAASPRCPQQQGLYKCGPAEAQTTLPSTASSDPRLAALWKIIAICLLYKTCSKISTCPSSKSLPKACSQVSAQTWKTLIEQAARLMPKATAPASACLDQWWGPQQNSWNPVDRRPLREIA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00101446;
90% Identity
iTF_00100748;
80% Identity
-