Basic Information

Gene Symbol
GATA-B
Assembly
GCA_000956255.1
Location
JXXA01001891.1:1-1197[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.4e-18 9.1e-15 53.7 4.7 1 35 138 171 138 172 0.98

Sequence Information

Coding Sequence
CAAAACGATATCACCCGACACAGTCAAACGAGCCAGAGCGGACGCCGGAAACAAACCTGCCCGAGTCGAACGCCCGTCGAGGGTAACTCGCCGACGTCGTCGCTCGATAACAACGGCATCGGAGGTACCGTCGTCGGCAGCGGGGGTgctagcggtggtggtgctattAAACTCAGCGGCAAGGTCGCATCCACCGGCAATGTGTTGTTCCGCGTGGCGGAGCACTCCAGCTCCGGGAAGGCCTCATCGCAGGGTGGTTCCGCCCGGTCCGAGACCAACAGTACCGCGTCCGGCAACAGCAGTCCCCAGTTACTACTCACGAAGCCTGCGCAGGTGGCGCAGtcgcaatcgcagcagcagcagcagcagcagcaatcaccGCAGCAAAACTCGCAGCAGAAGGATATGTCCTGCACGAACTGTggcacgaccacgacgaccaTCTGGCGGCGGAACGTACGCGGCGAGATGGTGTGCAACGCGTGCGGGCTGTACTTCAAGCTGCACGGCGTGAACCGACCGCACACGATGCGCCGCGACACGATCCATACGCGGCGGCGTCGTCCGAAGGGCGACAAAAGCACCCGAAGGAAATCCGTCAAGCAGGAGAGTGGCGATATCGTGGACAACGGAGTGGAAACGGCTGTTGATCTGCAGACCCTGCAAAACCAGCTAATAGCGCTGCGTGACGCAACCCGCGGTACGCCGACCAACTTTACCATGCCAACTGCCTTCCAGCATTATCTGCGCGCGACGCAAAACTTCGACCCGAACGGTAGCGGCGAGCTGCTGGttggcgacggtggcgacgacaGTGGGCCCGAGAACGATCTGGACTCGTGTAACCTGCCGCTGAATCTCGTGGCGACCCAGCTGGGCAGCGATTCGTCGCAACACTGA
Protein Sequence
QNDITRHSQTSQSGRRKQTCPSRTPVEGNSPTSSLDNNGIGGTVVGSGGASGGGAIKLSGKVASTGNVLFRVAEHSSSGKASSQGGSARSETNSTASGNSSPQLLLTKPAQVAQSQSQQQQQQQQSPQQNSQQKDMSCTNCGTTTTTIWRRNVRGEMVCNACGLYFKLHGVNRPHTMRRDTIHTRRRRPKGDKSTRRKSVKQESGDIVDNGVETAVDLQTLQNQLIALRDATRGTPTNFTMPTAFQHYLRATQNFDPNGSGELLVGDGGDDSGPENDLDSCNLPLNLVATQLGSDSSQH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00103362;
90% Identity
iTF_00103362;
80% Identity
-