Basic Information

Insect: Anopheles punctulatus
Gene Symbol: -
Assembly: GCA_000956255.1
Location: JXXA01008595.1:19948-22173[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 3 2.4e+02 2.2 0.6 1 23 144 168 144 168 0.94

2 10 0.043 3.6 8.0 0.4 1 23 183 207 183 207 0.96

3 10 0.066 5.5 7.4 0.8 1 23 246 270 246 270 0.97

4 10 0.11 9.3 6.7 0.0 2 19 287 306 286 307 0.91

5 10 0.43 35 4.9 0.4 3 19 318 334 316 334 0.92

6 10 0.00025 0.02 15.1 0.2 1 23 346 368 346 368 0.99

7 10 5.7e-06 0.00047 20.2 0.5 1 23 372 395 372 395 0.95

8 10 0.68 56 4.2 2.0 1 23 401 424 401 424 0.90

9 10 0.033 2.7 8.4 0.4 1 23 429 453 429 453 0.98

10 10 0.044 3.6 8.0 0.7 1 15 461 475 461 485 0.89

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	3	2.4e+02	2.2	0.6	1	23	144	168	144	168	0.94
2	10	0.043	3.6	8.0	0.4	1	23	183	207	183	207	0.96
3	10	0.066	5.5	7.4	0.8	1	23	246	270	246	270	0.97
4	10	0.11	9.3	6.7	0.0	2	19	287	306	286	307	0.91
5	10	0.43	35	4.9	0.4	3	19	318	334	316	334	0.92
6	10	0.00025	0.02	15.1	0.2	1	23	346	368	346	368	0.99
7	10	5.7e-06	0.00047	20.2	0.5	1	23	372	395	372	395	0.95
8	10	0.68	56	4.2	2.0	1	23	401	424	401	424	0.90
9	10	0.033	2.7	8.4	0.4	1	23	429	453	429	453	0.98
10	10	0.044	3.6	8.0	0.7	1	15	461	475	461	485	0.89

Sequence Information

Coding Sequence: atgggaaaaaggacggtaaaaagaaagcaacaaaagtCCATCGATGATTTCTTTccgaatgggaagaaaaagaaatccgaAGAGGAGCCAGAAGCGatcgaaacggaagaagaGCAGCCAGTACAACCATCATCGCAACCTGAGGACTCAGATGCGCCTAGGGTAAAGAAATTGGACGGAGAGGACgagaatgatgatggtgatgaggaGATCAACGAACTGCGATCTACTGTGGCTGCTTGGCTAAAACAACAGGCAGAGAAGGAGGACACGTTGGTAAACGAACTCCACGACGAAAGCCTGATCGGGCCCGACGATCCGGAAGAGCCAGAACAGGAGCAAGGGCATGTGAACATGGACCTGCTGGAGACCAAAATTAGGCATGCGTTGAAGAAATACTCGGAAATCCAAAAACGGAGGAGTTTCAAGTTTGAATGTGAATGGGACAAATGCAAAAAGCTCACCGGTGACGAGCGGAAGTACTTTAACCATGTAGATTCGCACGCTGAGCAAGCGATCAAACATAAGACACATGACGGCGTTCCGTACAAGTGCGAGTGGGATTTGTGCGATTTCGTGACGTCGGACAGTGAAAAGCTGATCGGGCATGTTCATTACCATGCGTACCACACGAAGCTGAAGGTGCACGGTGCCAGCATGCACATGCTGATGCGTCTCCCGAACTGCAACCTTGATAGCCGATTGcgcaacatcatcaccaacaaGAAGGTTACCTTCCAGTGCGAGTGGTCAACTTGCACCGAACGTTTCATTAAAGCGTTAGATTTTTTCTACCACGTAAGGAACCACGTTACTGATGCGTTCCCCCCGTGCCAGAACTCGAGCAAGGTACCGATCCGTTGTGAATGGTCGCTGTGTAAGGTGGCTTACCGACAAAGGTCACTGCTAATCAATCACGTATGGTTTCACACCACCGAGAGGGGGATCGCGTGCTTTAACTGCGGCACAACGTACTACACACGTCAGAAATTCCTCGATCACTGCGCCCGGCAGCTAGATTTGTCCCAACGCCAGTACCAGTGCGGTGAATGTGGCCGCTTGTACTCAACGATGGCTTTGATGAAAACGCACCTTGAAACACACGATATGGCATACCCTTGCACAATGTGTCCGATGAAATTCGGCACCAACAGTAGCTTAACGAAACACATGGCCCAGCGGCATTTGAAGGAGCGTAACTTCCATTGCCCGAAGTGTGAATATGCGTGTTTTGCCAAGCGCGACATGTTGAACCACGTTCAAGCTGTCCACGAAAAGAAACTCTACCGTTGTGAGGAGTTTGGCTGCACCGTAGCCTACCATTCGGAAAGTGCGATCAAACGGCACATCAACTGGCATTATAATCTGCCTCCGCCCACGTACGCCTGTCATCTGTGCGATAAACGCTACAATACGCATTCATACCGTATTTCGCAGCACCTGCGCTTCGTCCACAAGCTGGAACGCACTCCCGGAATGAACAGTTTTCGTTACCGAGTTGACTTCGACGGTGTGTATCGGCTTGCATCGTACGTAACCCCGCGCCTCATTGCGATGCAGCAAGGGTCCCAAACGAACGATGGGAAGCAAATTGTCCCGTTTGTACAGAAGCAAAGGAAGCAACAGGATGAAACCGTGGAGGAATCGCCACCGGAAACAAATATAAAGGGAAAGCCAAAAATTAAGGCAATTAAATCGATCGGTGAGCAACAACTTGCGATCGAGTTGGACATGGAGCCGACAGAAACGGACCAAACCGCGACGAACGATGGCGCTACTGGTGACAAAGGCAAGCAGAAGCACAAAGCTACGAAACCGGTAAAAACAAAGCGTGACGACTCGACGGATGATTCTgacagcaacatcagcagcgaCTCGCCGACAACGCAAACCGATGCACCGAAGACGAAGAACGTGCAGGATTTTAAGGTTATGAAGCGATACTTGAAACTGGGTAAAAAAACGGCTGAAATGTAG
Protein Sequence: MGKRTVKRKQQKSIDDFFPNGKKKKSEEEPEAIETEEEQPVQPSSQPEDSDAPRVKKLDGEDENDDGDEEINELRSTVAAWLKQQAEKEDTLVNELHDESLIGPDDPEEPEQEQGHVNMDLLETKIRHALKKYSEIQKRRSFKFECEWDKCKKLTGDERKYFNHVDSHAEQAIKHKTHDGVPYKCEWDLCDFVTSDSEKLIGHVHYHAYHTKLKVHGASMHMLMRLPNCNLDSRLRNIITNKKVTFQCEWSTCTERFIKALDFFYHVRNHVTDAFPPCQNSSKVPIRCEWSLCKVAYRQRSLLINHVWFHTTERGIACFNCGTTYYTRQKFLDHCARQLDLSQRQYQCGECGRLYSTMALMKTHLETHDMAYPCTMCPMKFGTNSSLTKHMAQRHLKERNFHCPKCEYACFAKRDMLNHVQAVHEKKLYRCEEFGCTVAYHSESAIKRHINWHYNLPPPTYACHLCDKRYNTHSYRISQHLRFVHKLERTPGMNSFRYRVDFDGVYRLASYVTPRLIAMQQGSQTNDGKQIVPFVQKQRKQQDETVEESPPETNIKGKPKIKAIKSIGEQQLAIELDMEPTETDQTATNDGATGDKGKQKHKATKPVKTKRDDSTDDSDSNISSDSPTTQTDAPKTKNVQDFKVMKRYLKLGKKTAEM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -