Apun003322.1
Basic Information
- Insect
- Anopheles punctulatus
- Gene Symbol
- -
- Assembly
- GCA_000956255.1
- Location
- JXXA01015696.1:12691-21335[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 0.009 0.74 10.1 5.0 2 23 389 410 388 410 0.97 2 19 0.011 0.91 9.9 5.0 2 23 417 438 416 438 0.98 3 19 0.0076 0.63 10.4 0.8 1 23 448 470 448 470 0.96 4 19 4.7 3.9e+02 1.6 0.1 3 23 495 522 493 522 0.70 5 19 4.3 3.6e+02 1.7 1.9 2 23 529 550 528 550 0.88 6 19 1.1 94 3.5 0.4 1 23 556 576 556 576 0.85 7 19 7.5e-05 0.0062 16.7 0.2 1 20 588 607 588 608 0.97 8 19 0.0028 0.23 11.7 1.0 2 23 617 638 616 638 0.97 9 19 1.6e-05 0.0013 18.8 0.9 2 23 644 665 643 665 0.93 10 19 0.049 4.1 7.8 3.0 2 23 674 695 673 695 0.95 11 19 0.11 8.8 6.8 0.2 2 12 702 712 701 714 0.91 12 19 0.00045 0.037 14.2 3.4 2 23 1077 1098 1076 1098 0.97 13 19 0.037 3.1 8.2 4.3 2 23 1105 1126 1104 1126 0.97 14 19 0.074 6.1 7.3 1.6 1 23 1136 1158 1136 1158 0.96 15 19 1.3 1.1e+02 3.4 0.0 3 23 1183 1210 1182 1210 0.80 16 19 0.55 45 4.5 0.2 2 23 1217 1238 1216 1238 0.95 17 19 4.4e-05 0.0036 17.4 0.3 1 20 1276 1295 1276 1296 0.97 18 19 0.0073 0.6 10.4 1.6 2 23 1305 1326 1304 1326 0.95 19 19 0.00014 0.011 15.8 1.0 2 23 1332 1353 1331 1353 0.93
Sequence Information
- Coding Sequence
- ATGGCAGACAAAAAGCAGTGTGCGCTTTGCTTATGCACTGACTCCAGCTGGTTTCTGGAGGTGTTTGATGATGACAATAGAATGCTTGATATTGCGGATATCGTATCGAAACATCTGTGGTTTGATCTAAAACCATCCACCCATCCGAACATTTGTTCCGAATGCTGGACAAGTGTACATGATTTTCACCTGTTCTACACCAAGCTTGAGAGTGTTCATAATCATGATCTGCTAGATGTAAACTCAGTGGCAGATTGTGCATTGTCCGACGTTAAGAGCGTGCAACTCGTTCACGAACATCAGGATAATCGTTTTCAACCAGCAGAACATGATGCCGAAAACCAATCGGATGATAATGAATCAGGTGCTAGAAATCAAATGCCAAGAAGTGCAACGAATGTGTCCGATACGAAAACCACCgataaaaaacatttcgttGTGGTGGACGAATATGAcgagaatgatgatgattactTTGATGAGCATACTCGTTCGGACGATGATTTTCTTGCCAACTCACCGAAAACTGAAGTAATTGTACCTTCGGAAATGCCGGCAAAACGTGGAAGGGGACGTCCGCCAAAACGAAAACcggaacaacaaacaacgcttCCAACGGCTGGAAATATATCTTCCACGGAGCATGTGCCCGAAGCACGAATGAATGAttcccaaacaaacacaccggacCAGCCAGCAAAGCGCCGCCGGGGAAGGCCTCCGAAAATTAAATCAGAAGTTACACTCATGGAACGGGACGATGGACCAACGATAAAGCAGGAAAAGGACGCGCAAACCCCAACATCTGATCAAGCTCAACCGATCAAGCGAGGTAGAGGTCGCCCACCGAAAGTGAAGTCTGAAAACGGGTTACCTACGGTGTCGGCAACCAATCTTTCCGCCATACGCAAACGGAAGTCGATGCTGGTGCGAAGGGATAGAAGCAGCAGTACTAGCGCGCAAGATGACGATCCCGACTTCGATGGGATGCGGGTTAAAAGGAAAGCatcggaacaaaaaaaggtcCGCAACGATCGGGACGAGCGAATCTTCCAACACGTAACCGATTTTTCCTGTGAGTACTGTGTGGACAAGGTGTGTTTCAAGCGTTTCATCGATGCGGACAGACACTACAAGCTGGTACACAATGAGCCGGGCTTTTTGAAGTGTCCaaagtgtgataaaaaatgtcacacaACCGGCATGTTCCTCAGCCACATGGAAACGCATGAAGATCCGGATAAGAACAAgTGTCATATATGCGGCAAGCAAACGGATTGTAATATCTCGCTGAAGAAGCATATGCGCATCCATCAAAGCCAGCTAGACCAGGACCTGCCGTTCCCGTGCAgcgtttgcaaacgaaagtTTGAATCGGAGGAGCAGCGTATCAAGCACGAAAAGTTGCACGTACCCAAGCCCCAAATCAGGAAGGAAAAAGGCCCCGACCACGAGCTGCTTGCGTTCTATAAACGTATCTACTGCGACATATGCGAGCAGGAGAAGCCATTCTCGACGTCGTACGAAAACTTCTGGGATCTGCGGGTGCACATGGACCAGGAGCACAACAAAGGTGCGTACCTGAAGTGTCCACTGTGCTCCAAGCGACACCTCTACCGGCAGCACCTCATCGCTCACATTGACGTGCACAACAATCCAGAAAAGTATCGGTGCGAAGTGTGCAAAGAAATCTACCAGAATCTGGATCAGCACATGATTAAAGCGCACACACCCCACACATCGTCAGCGTCGGACAAAAAGTACAAGTGCGATCAGTGTGGGCGAATGTTTAACTTTTTAGCGAATTTGAAGATGCACATCGATTGCATTCACGGCTCGAAGGATATTCGCTGTAATATCTGCAATAAATATTTCAATCTGAAAGCCTTCCAAGTGCACAAGCGAACGGCACACACGGACCAGATGCTGATGTGTGAACACTGCCCGAAGATGTTTAAGACACGTAGCGCACTGGAAGCGCACAAGAGCGCCCACGACGATAGCTTGGTGCAATTTACGACGTGTAAGTTCTGCAACAAACAGCTCCGCTTGTCCAACGTCAAGAAGCACATGAAAAATCTGCACTCCGAGGAAGGACCGTCCAGCTGTGAGCTGTGCGGCAAAACGTTCCGCAGAGGTGCAGGCGAGGCCAGAGGAGGGTATTGCGACGGTAATTGTCCTCAAACCATCATTGGACCCGGACAAGCTGGCACCGAAATGGTCGAAGTATTGGACATCGAGTTTCTGGATGAGGATGCCGAGGAGCTTCGATTTCAGATAAGGCATACAGCCAGTAAGAAGGATAACGAAGACCTTGCCACACCAAAACGTACATCCTACGAACCGCAATGGTATCACAAAAGCAATGTACATCCAGACAAGAACCAAAGGTTAGGTCCAGATGACGAGGAATATATTTcaggggaagaaaattatgataacGAAAACAGTCACTACGATAACGATTCCCTCGAACACGACGAAAGCGCTGATACATCCTATGTGGAGGACGAAAAGAATTCCGATAAAATTGGGCAACGTTCTACAATCGCTATCGATATTCTGGATCCTCAAGAGCAGCCAGTAAAACGGCGTCGAGGTCGTCCACCGAAGCGTAAGCTACCGGAAGATGAGGTGCAAACTTCcagtggggaaaaaaagaaacaaaatttgaaagcaaCCCAAGCCTCATCCATCGTGTCATCCGCGGACCAACCGGTAAAGCGTGGGCGTGGTAGACCACCGAAGCAGAAACCGCTGGACGCTGGTGCCGTGCCGGCATCTCCTGCTAATACACCATCCATAAAGAAGGAGATAAAAGCGGAGTTAAGCGACAGTGGCGAGAAAGATACAACACCGAACACGTCGAAGGCAGGAGTACAACCCGAACGTAGATCGACCCGTGTTCGGAGGGTAAAGTATCTGAGTGAAACCGAAGTGGACAccgcggaagaagaagaaagcgaacTGAACGAGAGTGACATGGAGGAATGCGATGATCCAGAGTACGAGGAAAAGCTGGAGTTGCAAAGAAAGCTGAACATGGACGATTATGAGTTCTACGAGTATCAGTGTAACATGGAATCGGAGCAGTTTGCGCGCGATAATAGAATATTTCAGTACGTGGATGAGTTTACTTGCCACTATTGCGTGGAAAAGGTGCATTTCAAGCGGTTTGCCGAAGCGGACGTGCACTATCGAGTGGAGCACAAGCAGCCCCCGTTCCTCAAGTGCCCAAAGTGTGACAAGAAATGTCACAACCCAGGCATGTTCATCAGCCATATGGAAACGCACGACGATCCGGAAAAGTCTAGGTGCCACATTTGCGGCAAGCTAACCGATTGCAATATCTCGCTGAAGAAGCATATGCGCGTACATCAAAAAAAGCTTGAGCAGAACCTGCCTTATCCATGCAGTCGCTGCAAGCGCAAGTTCGAGACCGAAGAGCAGCGCGACAAGCACGAGAAGCTTCACGTACCGAAGCCGTTCATACCGCGCGATGAGGGGCCTGATCTGGAGGTGCTCGAGTTCTACAAGCGGATCTTCTGCGACATATGCGAGGAGGGCGAACCGGGATCGACCTCGTTCGACAACCTGTGGGCTCTGCGAACGCACATGGCCAACGAGCACCGGAAGAGCCTGTTCGTCCGGTGCCCCGTGTGCTTCAAGCGGCAGATCAATCGCACCCAAGTCATCACCCACATTGACATGCACAAAAATCCGGACAAGTATCGATGTGAAGTTTGCCAGGAAGTTCATCAGGATCTGCCGCGACACATGACGAAGGCGCACACATCCAACACGATGGAACAGTCGGAGAAAAAGTACAAATGTGAGCAGTGCGGGCGAATGTTCAACTACTTGACCAACTTAAAAATGCATATCGATTGCATTCACGGTTTAAAGGATGTTCGCTGCAATATTTGCGACAAGTACTTCAACTATAAGGCGTACCGTACGCACAAGCGTAAGGCACACACCGACCAAATGCTGATGTGCGAACACTGTCCGCGGATGTTCAAGAATCGTAAAGCGTTGGAAGCCCACAGGGGCTACCACGACGCGAGTCTGCTGAAGCTAACGAAATGTGAACTGGATGAACGGAAAGGATATTCTGTTGCAATAATGCAAGCTGAACTGCACAGTCGTAGCAACCATCGCTCCTGGCTGGTGTGGTTCGGAGTAGCGTTTACGATGGAAACCAATCACAGCACCATAATGCCGTGCATAGCCGTCCAACGAAATGAATGCTCCATCTGCCAACACAACATTGCTGGATCGCAGCGAATGGAAGCGCTCTGTGGACACACGTTTCATCGGCAGTGTTTGATGCTATGGATGCGGACGTACGCTTTTTGCCCCGACTGTCCACGCAGGATGTAG
- Protein Sequence
- MADKKQCALCLCTDSSWFLEVFDDDNRMLDIADIVSKHLWFDLKPSTHPNICSECWTSVHDFHLFYTKLESVHNHDLLDVNSVADCALSDVKSVQLVHEHQDNRFQPAEHDAENQSDDNESGARNQMPRSATNVSDTKTTDKKHFVVVDEYDENDDDYFDEHTRSDDDFLANSPKTEVIVPSEMPAKRGRGRPPKRKPEQQTTLPTAGNISSTEHVPEARMNDSQTNTPDQPAKRRRGRPPKIKSEVTLMERDDGPTIKQEKDAQTPTSDQAQPIKRGRGRPPKVKSENGLPTVSATNLSAIRKRKSMLVRRDRSSSTSAQDDDPDFDGMRVKRKASEQKKVRNDRDERIFQHVTDFSCEYCVDKVCFKRFIDADRHYKLVHNEPGFLKCPKCDKKCHTTGMFLSHMETHEDPDKNKCHICGKQTDCNISLKKHMRIHQSQLDQDLPFPCSVCKRKFESEEQRIKHEKLHVPKPQIRKEKGPDHELLAFYKRIYCDICEQEKPFSTSYENFWDLRVHMDQEHNKGAYLKCPLCSKRHLYRQHLIAHIDVHNNPEKYRCEVCKEIYQNLDQHMIKAHTPHTSSASDKKYKCDQCGRMFNFLANLKMHIDCIHGSKDIRCNICNKYFNLKAFQVHKRTAHTDQMLMCEHCPKMFKTRSALEAHKSAHDDSLVQFTTCKFCNKQLRLSNVKKHMKNLHSEEGPSSCELCGKTFRRGAGEARGGYCDGNCPQTIIGPGQAGTEMVEVLDIEFLDEDAEELRFQIRHTASKKDNEDLATPKRTSYEPQWYHKSNVHPDKNQRLGPDDEEYISGEENYDNENSHYDNDSLEHDESADTSYVEDEKNSDKIGQRSTIAIDILDPQEQPVKRRRGRPPKRKLPEDEVQTSSGEKKKQNLKATQASSIVSSADQPVKRGRGRPPKQKPLDAGAVPASPANTPSIKKEIKAELSDSGEKDTTPNTSKAGVQPERRSTRVRRVKYLSETEVDTAEEEESELNESDMEECDDPEYEEKLELQRKLNMDDYEFYEYQCNMESEQFARDNRIFQYVDEFTCHYCVEKVHFKRFAEADVHYRVEHKQPPFLKCPKCDKKCHNPGMFISHMETHDDPEKSRCHICGKLTDCNISLKKHMRVHQKKLEQNLPYPCSRCKRKFETEEQRDKHEKLHVPKPFIPRDEGPDLEVLEFYKRIFCDICEEGEPGSTSFDNLWALRTHMANEHRKSLFVRCPVCFKRQINRTQVITHIDMHKNPDKYRCEVCQEVHQDLPRHMTKAHTSNTMEQSEKKYKCEQCGRMFNYLTNLKMHIDCIHGLKDVRCNICDKYFNYKAYRTHKRKAHTDQMLMCEHCPRMFKNRKALEAHRGYHDASLLKLTKCELDERKGYSVAIMQAELHSRSNHRSWLVWFGVAFTMETNHSTIMPCIAVQRNECSICQHNIAGSQRMEALCGHTFHRQCLMLWMRTYAFCPDCPRRM
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -