Basic Information

Gene Symbol
RERE
Assembly
GCA_000956255.1
Location
JXXA01002902.1:1-5419[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.2e-11 1.3e-08 34.6 0.1 2 45 1051 1095 1050 1096 0.91

Sequence Information

Coding Sequence
ATGTCACTCGTTTCCGGTGACGAACGGTGCCGGAGACTGGGTGTGCTGCAGCTCAGCCAGAACAAGCTGTCCGCAACGACCGCAACGTCGACGGCGACACTGACATCGGCatcggcggcagcagcagcggcaacagtgGTCAGTACCGTGCCAGTGCCTTCAATGGCAGTCACAGTGACGTCGACGGCGGTGACCACCAGCAACGCCATCAATCCCACCATTAGCACCCTGcccatcaccagcatcatcggCAAGGCGGCGAACGCTGCCAGTGCAAGTGCCGCCGATGCTAATGGACCGCTCCCGGTGACGATTCCGGTGTCGTCCGGTACGGTGGTCCCCTCGAGCAGTGCGGTCAGTGCGGtttcgacgacgacaacgacgaacACGCCCACTGCTGCGGCGACAGCCGCCACCGTTTCGAATGGGAATCAACCACCTGCTACGCAACAACCTGccacaaccaccgccaccaccaccaccaccgccgccgccaagCTCGAGCAGAAGCCCGTCGAGTGTAATTTGTGCCATCggaagtttaaaaatattcccgCTCTCAATGGGCACATGCGCCTGCACGGGGGATACTTCAAGAAGGACTCGGAGGCGAAGAAATGTGATAAGAAGGAGAATACGGGCCCACCGCTGCAAACCGCTAGCGTTGGCGTGCGGGCGCTGATCGAGGAAAAGATCATCAACAAACGCAGCAAGGATCTGAAGAATCTCTTATTGAAGGGTTCGTTCGTCGTGCCGGCACCACCGCTGACCGCCCGCCGGCTGATCGACGCCAACGAAGCATTTCTGTCGCCGAAAGCGGGCACGGTCGCGATCGTCTCGACGTCGAATGGTACCACGCAGATCATCAACACCGCCACGCTGCACTCGAAGCCCGGCACCGTGCTGAGCGCCAATAGTATCTCGCAGTCGGCCAGCaccacaccggcaccgtcgaTAACAATCAACGGTCTTGGAACGGCGGGAGCTGCTACCAGCGCGACGGAATTGAAGGATGCCACCTtgatcgagctgctgaagcGTGGCACGAAGGTGGCCGTGAAACGGGCAGCTTCGACCGGTGATACCTCGACGATCCTGTCACTGCAGCCAGCATCCACGATCTCGACCGCTACCACCCAGGCAACGGCTCAACTGATCACTTCCGCCAACAGCACGCGCACACTCACGGTGCTACCGGGTGCGACACTCTCCGCCACGCCCAAAATGACACCTTCGATCACGGGCACCAGTCTGATGGCGGGCAGCAACGGAGGAAGCAGCCCACTATCGCTCACCATATCGCAAACGCCAGCCTCATCGACGCCGGGAGATGTATTCACGCTTGCCTACTCGACCGATTTCGGGGATGGGGATGTGTACAGTGTAAGCGACACCGCCATGCTGCTGCAAGCCGTCGATCCGATCCAACTGCTGCAGGATTCCAACTCCACCGAGCCGCTCGACGAAATCGCACTCTCCGACTATGGCTCCATAAGCGATCAAGGCTTTACACCTTCCCGTCAAATCCAAGCCGTACTGGACTCCCCGCTTCCGGAGGGACTAGCCGAATTCGGAGCACTCCACGCCAAAGACTTCAGCGTCCTGTACGGTGGTAACCCATCGTCGACCGAAGCGAACGGAGGGTCAACGTCCGGTACCACCAATCTGCTGCAGTCGTCCCCATCCGGTGCTCATCTGTCACCGCTTCCCTCACCGTTGGCCTACCCGACCCCTCCAGCGTCCCATGAAGCGGTCGCGCAAGCCTCACCGTTCCTAGACGACTCACGGCACTTCACCGACGCCGGTTCGTTCTTTGACGATAAGCGCGGAGCGCAGAGCTTCCTCGACGACGGGTTCTTCAAGAGCGAACCGAAGGATGGCGACTCGTCCAAGGTGTCCGATAGCGAGAAGATACTTGCGCTGAAGCACGAGCTGCTCGACGAAAACCACGACCTGTTCCGTTCGAACAAACATCTGCTCGACGATCACTGCTCGGAGCTGTTCAAAACGGAGGACAGTTTCTTCGCCGAATCGAAACCGACCTCGGTGGACGGAACGTCCAAGATGAATCTGGACTTTCTGGACGATGCGCAGGTGTTTATTGAGGAAACGCGCAACACGTCCTCCCCGCTGTCGAATGCATTCTTCTCCGCCACGATGTCATCGGCGGCCGAAGTGAAGGAAGCGCTGGAGGAAGTGCTACccaacgatgatgacgacgacatcGGTGTGACGGAAGGCGACATCGATCTCTACTATCTGAACGGTCTTTCCTCGCTGCAGTCGCAGATGATGCCCAACTCGGACGATCCGTTGCTtgccaaaaaatcgaaaccctCCGATggcgaaacgaacgcaacgTTCGGTGGAGATGCGAGCAAAGTGCCGCTCACGGTGCAAACCGACCCGATGCCAAAGGATGCGGACAGTGTGTTCCTGAGCCCGAGCAGCCTGTCGTCGCACAGCTGCTCAtcctcgtcctcttcctcgcTCTCGCTGTCGTCCGTCACGTCACCGCGGCTGCAGCACGCCCTGCTGGGAAGCACCGGCTCCGGCGGTCCCGTGTGGCCCCGCAAACGTTCCCAAACCTCTGCCAGCAGTGCTGGCACCGTGCCCACCATACCGGCCGGACAGCGAAAGCCAACGATCTACCTATCGAAACTGCGTCGTTCGACTAGCTCGCTTCTGCCGGCGATCCACTACACGCCCTCGCCGATGCTGAACCCCGAGCGCACCGGTACGACCGGTTTGTATACGAGCGTATCCCACGGTAGGATGGCAGGAGCCGCAGATGTCGATCTCGACTCCACCATGGATAGCACCAGCGATATCTTCTCCGAGCCACCGTTACCGATACGGCCGCGCATCAACATCGGACCGGACTATCAGGCCGCCCTGCCCGACTGCACCCGGCCGGCGTACGGTGGTCTGCAGCAATTCCACACTTCCCAGCCCGCCCAACGGCTTTGGGACCCTGCGATGGCTCCGAACGACCGTCAGGTGCAGCGGTTCGTCGAGCTAGCACGCTCTTCGGCCGCCCCGCTCGGTTGCCATTCGGAGGAAAATGCCCTGCGCGCTCTGCTGGAAGCGAACGGAGAGATTCACCAGGCCATACTGGGCATGCTGCAGGGTCCACCCGCCACCATCCACCGGCGCTGGACGGCCGATGAAATCGAGCAGCTGATCCAGGGATTGGAAGAGTACGGCAAAGACTTCCACCGGATCGCTCGGGATCTTCTGCCGGGCAAATCGACGGCGGACTGTGTGCAGATGTACTACTTCTGGAAGAAGCTCGGCATCGACTACAAAGGTGCGCCGCTGGCGGGGCCACCGAAGTTCGCCGGCCTGCACACGGGATCACCGTCGCCAACGCCGTCACCGCCGGCTCCTCCGCCACCGGTGGA
Protein Sequence
MSLVSGDERCRRLGVLQLSQNKLSATTATSTATLTSASAAAAAATVVSTVPVPSMAVTVTSTAVTTSNAINPTISTLPITSIIGKAANAASASAADANGPLPVTIPVSSGTVVPSSSAVSAVSTTTTTNTPTAAATAATVSNGNQPPATQQPATTTATTTTTAAAKLEQKPVECNLCHRKFKNIPALNGHMRLHGGYFKKDSEAKKCDKKENTGPPLQTASVGVRALIEEKIINKRSKDLKNLLLKGSFVVPAPPLTARRLIDANEAFLSPKAGTVAIVSTSNGTTQIINTATLHSKPGTVLSANSISQSASTTPAPSITINGLGTAGAATSATELKDATLIELLKRGTKVAVKRAASTGDTSTILSLQPASTISTATTQATAQLITSANSTRTLTVLPGATLSATPKMTPSITGTSLMAGSNGGSSPLSLTISQTPASSTPGDVFTLAYSTDFGDGDVYSVSDTAMLLQAVDPIQLLQDSNSTEPLDEIALSDYGSISDQGFTPSRQIQAVLDSPLPEGLAEFGALHAKDFSVLYGGNPSSTEANGGSTSGTTNLLQSSPSGAHLSPLPSPLAYPTPPASHEAVAQASPFLDDSRHFTDAGSFFDDKRGAQSFLDDGFFKSEPKDGDSSKVSDSEKILALKHELLDENHDLFRSNKHLLDDHCSELFKTEDSFFAESKPTSVDGTSKMNLDFLDDAQVFIEETRNTSSPLSNAFFSATMSSAAEVKEALEEVLPNDDDDDIGVTEGDIDLYYLNGLSSLQSQMMPNSDDPLLAKKSKPSDGETNATFGGDASKVPLTVQTDPMPKDADSVFLSPSSLSSHSCSSSSSSSLSLSSVTSPRLQHALLGSTGSGGPVWPRKRSQTSASSAGTVPTIPAGQRKPTIYLSKLRRSTSSLLPAIHYTPSPMLNPERTGTTGLYTSVSHGRMAGAADVDLDSTMDSTSDIFSEPPLPIRPRINIGPDYQAALPDCTRPAYGGLQQFHTSQPAQRLWDPAMAPNDRQVQRFVELARSSAAPLGCHSEENALRALLEANGEIHQAILGMLQGPPATIHRRWTADEIEQLIQGLEEYGKDFHRIARDLLPGKSTADCVQMYYFWKKLGIDYKGAPLAGPPKFAGLHTGSPSPTPSPPAPPPPV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00100908;
90% Identity
iTF_00100247;
80% Identity
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