Basic Information

Gene Symbol
-
Assembly
GCA_000956255.1
Location
JXXA01009881.1:7223-10801[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 0.42 4.5e+02 0.8 0.1 18 46 220 255 219 255 0.77
2 4 4.5e-11 4.8e-08 32.7 0.1 1 38 261 299 261 299 0.96
3 4 2.3e-08 2.4e-05 24.1 0.1 7 44 301 342 300 344 0.91
4 4 8.5e-06 0.009 15.8 0.0 2 38 351 388 350 389 0.91

Sequence Information

Coding Sequence
ATGTCTAGCTACAGTTCAGACTATGAATCTTCGTACTACACAGAATCGGAAGCAGAGAGCGATTTCGCGTTACAGGAGGATGCACCGGCTAATCAATGCAATTATACGCTTGAGGTGGAGGATATTCTCCGGACTCATTTGGACATCACGACCACGAATGCAATAGGTCTTAATCATCAATATAAAGCGAAGTTAATAGCTTTGCGAATGCATCTCGAAAACTTGCTCTACCGTTGCCAGGGTCGGCTTCGTGACGTTGAAAAGAGCCTCGATAATATTCGAGAGAATGCAGTACAGAAAGTCCGACCAGCGAAACCACGCCAACCTGGTTACATATGTGGGCAGCCGTTTTTTAAAGACCATGAACTGTACCCAGGGCCGCACAATCAGGATTACCTGTACCGGAAAAACGTGAAGAAAGAATTCTTCCCCCTGGATTTGTTCGAAGCGGTTGAAACATTGTGGACCGGAAAAGATAAGCAGGCTGTAAAGCAAAGTGTGCGCATTCAGGCACACGAGTTCCTCCGCAGAGAAAATGATTTGCGCGAGAAAATGTGCGACAACTCGACAGCCCTGGAGCGAATTAGGAATGAAAGGCTGGCTTTAGAGTCACTTGGTTTGGAGGATCTGTGGTGTAAGGCGCAAGCTTACGATGGGAAGTACGGAGGCCAAAGGTTCACCGTAGACTGGTTGAGAATATCGAACACTGCCGTCAACGGCCGTCACACCGCAGCCGCATGCGAAGGCATTTGGAATAATTATCTAAAACCAGGATTGAAACGATCTGTCTGGACGCCGGCAGAAGAATCTAAATTAGTGGAAGCGGCCGAAGCACATCAGCACCGGTGCTGGGATCGTATAGCGCAATCCGTGCCGGAGCGATCCGAGTATCAGTGTTTTGAAGAGGATGATTTGCTGCTACGTCTAGTCGATGAAAATCGTATCGGAAATAACATCATTTGGAACAAAGTTGTGGAACGCATGCCGTATCGTAACAAGGTGCAGGTGTACCATCGTTACAAGTATACTCTGACACGACCGCTCCGGAAGGCGAAATTTACCGCTGAAGAAGATTGCGTGATTACGGCGTACGTGCAGCAGTttggtgatgattttaaattcttcCCCGAGGAGTTGCTTCCGGGAAGGACAACGAAGCAAGTGTGGGCTAGTTCTGTATCCGACGATATCATTGTGGTGGATATTGAGAATCATTCGTCTGACGAGGAAGTTATCTTCGTGTCTAAAACATGCAGCGACAATTTAGCAGCACGAGAGGAATGCAAAGAAGCAGAACAAAATGATACGTCCACTGCGTTACTTTTGTATCAACGTGACCACAGCTCGGAGACACACCAATCTGGTGGGGAAGGCGAACTGCTTGACGATCACCAATTGCGTCACGTGAACAATGAAACGATAGACAGTAGTGCAGCTGTAGGCAAAGTAGTCGTGACAGAAACGCTCCCCGTTTCAAACATGGAAATTTCATCCGAAATCGGCGAACCCTTAACCGCAGTCGATATTATTCGAAtgttgcacacaaaacacaaaagtgAGTATGAAGAATGTAGTGCAGAATCCGACGTGGAAGAGGTAACTGCGTACAGCAGAATATAA
Protein Sequence
MSSYSSDYESSYYTESEAESDFALQEDAPANQCNYTLEVEDILRTHLDITTTNAIGLNHQYKAKLIALRMHLENLLYRCQGRLRDVEKSLDNIRENAVQKVRPAKPRQPGYICGQPFFKDHELYPGPHNQDYLYRKNVKKEFFPLDLFEAVETLWTGKDKQAVKQSVRIQAHEFLRRENDLREKMCDNSTALERIRNERLALESLGLEDLWCKAQAYDGKYGGQRFTVDWLRISNTAVNGRHTAAACEGIWNNYLKPGLKRSVWTPAEESKLVEAAEAHQHRCWDRIAQSVPERSEYQCFEEDDLLLRLVDENRIGNNIIWNKVVERMPYRNKVQVYHRYKYTLTRPLRKAKFTAEEDCVITAYVQQFGDDFKFFPEELLPGRTTKQVWASSVSDDIIVVDIENHSSDEEVIFVSKTCSDNLAAREECKEAEQNDTSTALLLYQRDHSSETHQSGGEGELLDDHQLRHVNNETIDSSAAVGKVVVTETLPVSNMEISSEIGEPLTAVDIIRMLHTKHKSEYEECSAESDVEEVTAYSRI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00102955;
90% Identity
-
80% Identity
-