Apun008795.1
Basic Information
- Insect
- Anopheles punctulatus
- Gene Symbol
- -
- Assembly
- GCA_000956255.1
- Location
- JXXA01009963.1:1-1451[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.61 1.5e+03 -1.3 0.0 29 37 43 51 42 59 0.77 2 2 1.4e-13 3.5e-10 39.1 0.0 1 45 293 337 293 337 0.95
Sequence Information
- Coding Sequence
- AGCCCCtattcccaccaccaccattcccaacaccaccagcaccaatcGTCGCCGGTCATCTCGACGTCCACCAATATCTCGATCGCCCAAAGCAGCAGTTCCTCGCCACCGTACTCGTACAAATCGCCCTACTCCAGTCTCTACTCACGCAGCCCGGGCGCGGTGGAGCGTGATCGCGAACGCGAAGAACGTACCCGCGATcgttcctcctccttctcgcaCACGACATCCACCTCGCCCCATCGCATCCAGTCCACGTCCGGTTCGTCGGCATCATCGGTTTCGGCTCAGATTGCACTACAATCGCAGGCCACCGGCGGTAACCACCATCAGTCGTCCTCGCATCAGTCAACGAGCAGCTCATCGAGCGCTACCTCAGCTCAACCGtcgacggcggcggcagcactTGCTGCCGGTTGGCCCGGACTCGGACAGACGCAACTGCACAGCATGCTCAGCTCGGCGTACGATTCCAGCACCGATATGAACCCGCTCAAGCGCAAAAAGCTACAGTCCATGTCCAGTATGCTGCGCGATACACCGATCCTGCGGAATGTGCTCGCCCAGGCCAATCCGGCCGATTCGTCACAGTCGACGGGCGGCGGTGCGTCAGGAGCGGGCGCTGCGGCGACGTCGGTCGCCACGATACAGACCATCCAGAGCGGCATGAAGTCCGACCCGGAGCGACCGAGCAGTCATCACTCGAATGGTAGCGGATATAAGTCAATCAAGGAACCATCGCACTCACCGTACGCGGACAAATCCTTCGACGATGATCTGCTGGACTCACCGCACGCCTTTGGCGGAGACGCTCGGCTAGCCTCGTACGttccacaccagcagcagaagccaGAGTGGAAGCGCTACAAGCAGTACACGCGCACGGACATCCTGAACGCAATCGAGTGCGTACGCAAGGGCATGAGCGCCCTGCAGGCCTCTCGCAAGTTTGGTGTACCGTCTCGCACGCTGTACGACAAGGTGAAGAAACTCGGCATCACGACCGGTCGTCCGATCAATCGCGCTCTGAAGCGTTCACCGAGCTCCGGCAGCAGTCCCGCCTCATTTCCGTACGGGCTGAGTGGCGCAAGTCACATGTTTGGACCGGGCAGTGGAGCACCACCGCACGGTGGcgaccaccatcagcagcttcCGTCGCAGTCGCAACAGCAGGACGAGGAAGCATCGCAAGCGCCCG
- Protein Sequence
- SPYSHHHHSQHHQHQSSPVISTSTNISIAQSSSSSPPYSYKSPYSSLYSRSPGAVERDREREERTRDRSSSFSHTTSTSPHRIQSTSGSSASSVSAQIALQSQATGGNHHQSSSHQSTSSSSSATSAQPSTAAAALAAGWPGLGQTQLHSMLSSAYDSSTDMNPLKRKKLQSMSSMLRDTPILRNVLAQANPADSSQSTGGGASGAGAAATSVATIQTIQSGMKSDPERPSSHHSNGSGYKSIKEPSHSPYADKSFDDDLLDSPHAFGGDARLASYVPHQQQKPEWKRYKQYTRTDILNAIECVRKGMSALQASRKFGVPSRTLYDKVKKLGITTGRPINRALKRSPSSGSSPASFPYGLSGASHMFGPGSGAPPHGGDHHQQLPSQSQQQDEEASQAP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -