Aplu007146.1
Basic Information
- Insect
- Anopheles plumbeus
- Gene Symbol
- nfxl1
- Assembly
- GCA_034621735.1
- Location
- JAOEFI010000006.1:8231806-8234863[-]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.92 8.7e+03 -3.0 1.4 14 19 215 220 215 220 0.86 2 18 0.095 9e+02 0.1 0.5 4 10 251 257 250 257 0.95 3 18 1.3e-07 0.0012 18.9 17.7 1 19 265 282 265 282 0.99 4 18 2 1.9e+04 -4.7 2.5 5 10 307 312 307 312 0.93 5 18 1.9e-05 0.18 11.9 14.6 1 19 318 337 318 337 0.97 6 18 1.5 1.4e+04 -3.7 1.0 6 10 362 366 361 366 0.88 7 18 3e-06 0.028 14.5 14.9 1 19 372 390 372 390 0.93 8 18 0.9 8.5e+03 -3.0 0.5 1 8 416 422 415 423 0.50 9 18 8e-07 0.0075 16.3 15.9 1 18 426 443 426 444 0.97 10 18 0.81 7.6e+03 -2.8 1.8 5 10 467 472 467 472 0.95 11 18 2.8e-05 0.26 11.4 16.2 1 18 478 495 478 496 0.97 12 18 6.9e-09 6.5e-05 22.9 15.8 1 18 505 522 505 523 0.97 13 18 2 1.9e+04 -4.4 1.1 5 10 551 556 551 556 0.78 14 18 0.043 4e+02 1.2 5.6 10 18 570 578 568 579 0.92 15 18 0.16 1.5e+03 -0.6 5.4 3 11 592 600 582 601 0.84 16 18 7.5e-05 0.71 10.0 5.8 1 12 672 683 672 683 0.97 17 18 0.0023 22 5.3 13.5 4 18 713 727 711 728 0.92 18 18 1.2e-06 0.011 15.8 12.0 1 16 786 800 786 806 0.89
Sequence Information
- Coding Sequence
- ATGGCAAACCGGAATCGTAAGGGCGCCCCCAAGGAACAAAAGGTCTGGAAAGTTCCTGTAGAATCGGCTAGCCAAGTTACCATTGGTGGTGCCAGTAACGGCGTTAAAAGTAAATCCAAAAACTCGTCAACTGCAAATTCGAGAAAGACAGTCGAAGAAAACGTTGCTAGCGGCTCGAAAATCCCTGTGCCCAAGACTTCGGCTAATATGCTAAAGAAATCACAGGAAAAGTTCAACCAGGTCCAACGACAGCATGCCGAAACGGCCCGGAAGTATGCCACCGAGTACGTGTCGAGTGACGAGGAGGAAACTGGAGAAGCCGGCGATACTGCCACACTGAGCATTCTAGGAGAGGTGCTGAAAAATTACCACGGCGTAGATGCGGACATGGATAAAACGCAGGAGTACTTGCAAAATTTGCTCGAATCGCGCAACGCAGTGTGCCTAATCTGCATCGAAACAGTGAAGCGTGCAGATAAGATCTGGTCCTGTCACTCGTGCTacacgtttttccacctcatGTGCATCCAACGCTGGGCTAACGACAGTATGTCGATGAAGCGGATGCACCACGAACGGCAGGAAGGGTACTACAACAATCGGGGAGAGTACATCCCGAAGCCGGCCCTTTCCGTGCACTGGGACTGTCCGAAATGTCGTAAAGAGTATCAGGCGCAGGACATTCCACGGCATTACGAATGTTTCTGTCGGAAGGAGCAGAATCCAAGCGCTCACCCATGGTTGATTCCACATTCCTGTGGTGAGCCATGCGCGAAAAACCTGAATCCGAACTGTGGCCATAGCTGTCGGCTCCTGTGCCATCCAGGGCCGTGTCCACCGTGCCCACAGACGATCAGTGTGTCGTGCCTGTGTTTGGCTTCCCCGGTGAAAACGATCCGCTGTTCCCAGAAATCGTGGACTTGCACCAAGAAGTGCACTCGTAAACTGGGCTGTGGGATACACGAATGTGGCTATCAGTGTCACGATCCCGGCCGCTGTCCACCGTGCACAAGCCGCAGCAAGCAGCACTGCCTCTGTGGTGCCAAAAGCAAGGAGGTAAGTTGCCACGAATCGCGCTGGCAGTGCGACAAGGTTTGCAACAAACCGTTCCCATGCAATCTGCACCACTGTGAGCGCGTGTGTCACGCGGGACCGTGCGGTGACTGTCCGCTCGGCCTGCCACGGTCCTGCccgtgtggaaaaatggaaacacgcGCCGCATCCTGCTCGCAACGAATCGGCACGTGCGGTGATACGTGTCAGAAGGTGCTCGCCTGCGGCCAACATCACTGCGCGGAACGGTGCCATCTGGGGCCCTGCGGGAACTGCCTGGAGCTAGTCGGGAAAGTATGCCGCTGTGGTGCGACTACGAAGGAGGTGGCGTGCTACAGGGAGGCTACCTGCGAAAGCAAATGCAAGAAGGTGCGCCCCTGTGGAAAGCATCCCTGCAACCGGAAGTGCTGCGACGGTCAGTGTTCCGAGTGCGACAAGGTATGTGGGAAAACGCTGCCTTGCGGTAAGCACAAGTGCAGTTCGCTGTGCCATCATGGACCGTGCTATCCGTGCAATCAGAAATCGGTTGTCAAATGTCGCTGTGGTGGTACGTCCGTCGAGGTGCAGTGTGGTCGCGAGAAGAAGGCGAATGCCCCAAAGTGTAAACTGCCCTGCCGCATTCACTCCAAGTGCCATCATCTGAATCTCCACGCCTGCCACCTGAACGAATGTCCACCGTGCGCACAACAGTGTGGGCAACTGAACGACACGACCAACTGCGAGCATCCATGTACGGCGAGATGCCATGCGTCAGTGAAGGTAGTAACCAAAgacaaaaacttcaaaccgGTCGGACCGTGGGACGTTCCGAAGGAGACAGTCGAAGTTAAGCTGCTTCCACATCCTCCCTGCGCTGTGAAGGTGCCAGTGATGTGTCTCGGAGGACATGAAACGAGCGATTGGGCTTGCTCCAATTCAAAACCCTCGTCCTGCGGAAGACCTTGTGCAAGGCTGCTTCGGTGCGGTCTGCACCGATGTTCACTGACCTGCCATAAGGTAACGCACCGCGCGAGCACCACCGAAGACTCGCGGTGTGAGTCGTGTTCGGCGAGCTGCGCCATTGCACGTCCCACAGGATGCGTGCATCCGTGTCAACGAGCCTGTCACGTGCCACCGTGCAATCCGTGCCTGGTTGCAATGAAGGCCAACTGTTACTGCGGTCTGACGCAGGTGTTTTACAAATGCCACGAGTTTTATCCGCCAGATTTAGACGGAATGGGAGAAGGGGAGACGATGGAAGCATTAAAGCAACGCCGGTCCTTGGTGATGAGCTGCGGCCagaaatgcataaaaaatCTTCCCTGTGGCCATCGTTGCACCGCAACCTGTCATCCCGGCCGATGCCCGAATGCGGAGCAGTGCGCGAAGAAGGTGAAAATAGCCTGCCATTGTTCCAACCGCAAGGCGGAGGTACATTGCAGTGTGGCAAACGCCACACCAACGCTCGACTGCGACGCCCAATGCGAGATCCTGCGGACACAGAAACAGGAAGAACTAGacaaacaggaacaggaagccCGGGCCCAGCAGGCTATTGAAAATCAGAAGGAATTGGAAGAATACGAGCGTAAGTTCAAACGGCGGAAGCATCGCGGACGTAAGCGTCAGGATATGCAAACGGACAAAGGTGGCCAAATCTGGATGTACCTGTTGCCCGTAGCAGTTGTTTTGATAGGAATAGGGTTgtactttttgtttgcgaaatAA
- Protein Sequence
- MANRNRKGAPKEQKVWKVPVESASQVTIGGASNGVKSKSKNSSTANSRKTVEENVASGSKIPVPKTSANMLKKSQEKFNQVQRQHAETARKYATEYVSSDEEETGEAGDTATLSILGEVLKNYHGVDADMDKTQEYLQNLLESRNAVCLICIETVKRADKIWSCHSCYTFFHLMCIQRWANDSMSMKRMHHERQEGYYNNRGEYIPKPALSVHWDCPKCRKEYQAQDIPRHYECFCRKEQNPSAHPWLIPHSCGEPCAKNLNPNCGHSCRLLCHPGPCPPCPQTISVSCLCLASPVKTIRCSQKSWTCTKKCTRKLGCGIHECGYQCHDPGRCPPCTSRSKQHCLCGAKSKEVSCHESRWQCDKVCNKPFPCNLHHCERVCHAGPCGDCPLGLPRSCPCGKMETRAASCSQRIGTCGDTCQKVLACGQHHCAERCHLGPCGNCLELVGKVCRCGATTKEVACYREATCESKCKKVRPCGKHPCNRKCCDGQCSECDKVCGKTLPCGKHKCSSLCHHGPCYPCNQKSVVKCRCGGTSVEVQCGREKKANAPKCKLPCRIHSKCHHLNLHACHLNECPPCAQQCGQLNDTTNCEHPCTARCHASVKVVTKDKNFKPVGPWDVPKETVEVKLLPHPPCAVKVPVMCLGGHETSDWACSNSKPSSCGRPCARLLRCGLHRCSLTCHKVTHRASTTEDSRCESCSASCAIARPTGCVHPCQRACHVPPCNPCLVAMKANCYCGLTQVFYKCHEFYPPDLDGMGEGETMEALKQRRSLVMSCGQKCIKNLPCGHRCTATCHPGRCPNAEQCAKKVKIACHCSNRKAEVHCSVANATPTLDCDAQCEILRTQKQEELDKQEQEARAQQAIENQKELEEYERKFKRRKHRGRKRQDMQTDKGGQIWMYLLPVAVVLIGIGLYFLFAK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00108064; iTF_00109516; iTF_00096750;
- 90% Identity
- -
- 80% Identity
- -