Aplu005964.1
Basic Information
- Insect
- Anopheles plumbeus
- Gene Symbol
- salm
- Assembly
- GCA_034621735.1
- Location
- JAOEFI010000004.1:26758378-26766651[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 1.1e-05 0.00099 19.5 1.5 1 23 631 653 631 653 0.98 2 7 5.9e-06 0.00052 20.4 1.9 1 23 659 681 659 681 0.98 3 7 0.071 6.3 7.5 1.9 2 23 1007 1028 1006 1028 0.97 4 7 1.4e-08 1.2e-06 28.6 1.5 1 23 1034 1056 1034 1056 0.98 5 7 0.00054 0.048 14.2 3.1 1 23 1066 1088 1066 1088 0.98 6 7 0.0022 0.19 12.3 2.1 2 23 1371 1392 1370 1392 0.97 7 7 2.1e-07 1.9e-05 24.9 1.4 1 23 1398 1420 1398 1420 0.99
Sequence Information
- Coding Sequence
- ATGAAGGAGAATGGTTGTATCGATAACGAGGGCCCAATCGCGAAACCGTCGGTGCAATTGTTAGCGAAGATGTCGGAAGGATATGCCGAGAAGGCGGCTCGCCTGAAcgatcatcatcttcatcatccgCATTATCAGTCCGCGGCGGCGACAGGTCGCCATCAGCAGGAGCAGCTAGATCGGACGGACGAGATCGCGCATAACGAGGATAATTTAAGTGAGGACGAAAACAATGACGACGAAGAAATGATGCCCGGCGGCAGCCCTTCCGGGGCCGCGACCGGCTGCGAGGCGGCACTGACTGACCGGGAGAGCGAGCACGAGGCGCCCGCCGGGGAGAGTAGAGAGGACCTGAAGGGCCTCGGAAGTGAATGCGTGACTGGCCGCAGCAGTCCCCGGTCGCCGGTTTCGCTAGGCCGGGGGGGCCGGGCCAGTGTGGGTGAAGCGCTCGGCGCGATGCTCTGCGGAGCGGACCGGGGAGAGGACTCTtcgacgacggcagcggctgcagcggccgCCGCGGCAGCTGCCGCCCTTGGAGGTCCGGCCGCAGCCGCCattgccgcagcagcagcagccgcagccgcgtCGGCGGCCAAGGGCACGAGCCAGGGCGTGGGCGGAGCGGCCCTCTCGGCGGCCGATTTCAACCCGGCCGCCGCGTTCGGGTTCCCTCCTGCGCCCAGTCCGGCCCCGGGAATGTCCATCCAGGCGTTTCAGAACGCGATAGCGCAGTTCACGGCGAACGCCCTGGCCAACAACATGGACAACGACACGGTGGTGAAAAACCTGGCCATCCTGCAGTCCGCCCTGTTCacgttgcagcagcagcagttcctgCAGTTCCAGCTGATCCAGCACTTGCAGTCGCAGCTGGTGAAGAAGCACACGGAAAAGGAGGACGCTGCCTCGTCGCTGCACGGGGGCGGCCTAGCCGGGCTGGCCGGTGGCCTCGGCACCGGTGTCGATAGCGCAACGATCGGTttcctcaacaacaacaacaacaatcacaacCAACACAATCACAACAAGGGCGGCTCGCAGCACCACCTGCAGCATCACACGAACAACGCCAGCAGCCGTCTGcaacagcaccatcagcacctgcaacagcagcagcagcagcagcagcagcaacagcagcatcatcaacagcagcaacaacaccatcatcatcatcatcaacagcagcaacagcagcagagtCTTAAGAACGAGCCACAGGACTTGCGGAAGTCGCAGCCGGCGGCGCACCACCCCATCGACGCggacgaggaagaggaggtggaggaggagggcaTCGAGGATGCGTTCAGCAAGAACTACCAGATGGCGAACATgatggcggcggcagcggctgccGCCAAATCGCACGTCCCCAACCACGTCAGCGAACTGTTGCGGCCTTCGATTCATCCCGTTCCGGAAGAGGAGCTAAGGAAACCAAAAGTGTCGGAGGCGAGCAGTATCTTCGGTGGCGGTGCGCTGCCTTCTCCGAGCGCCGAGAAAAGGACATCGAACGATTCGTCCGTCGGTCAGTCCGGggcggtttccgtttcgctgccTTCGTCCGCGGCCCAAACGGCTTCCTCCACAACGTCGAGCATGGCGAACGCCGGTGGGCGATCGGAGGAGGACACAATCTTGACCTACCACCAGGAGCACGCCGGATCGCTGGGCAGCTTCTCGTCGCTGGCGGCGAACATCATCACCGACCACGCGCCGCTGATGCTCGGCGAGCCGAACTCGCTCGCCATGCTGGAGAAGAAGGCACAGGAAGTGTTGAACTCCGCCTCGCAGGGCATCCTGTCCAACAACCTGCTGGACGAGTTGGCCTTCGCGAACGACAAGTCGTCCCCGAACGGGCGCAACGATGCCGCCCTGTTCAAGCACCGGTGCCGGTACTGCGGCAAGATCTTCGGCTCGGACTCGTCCCTGCAGATCCACATCCGCTCGCACACGGGCGAGCGGCCGTACAAGTGCAACGTGTGCGGGAGTCGGTTCACCACGAAGGGCAACCTGAAGGTGCACTTCCAGCGCCACTCGGACAAGTACCCGCACATCCCCATGAACCCCAACCCGGTGCCCGAACACCTGGACAAATACTTCCCGCCGCTGATACCACAGGAAGCTCTCaaggaacagcagcaacagcagcagcagcagcagcaacaacagcagcagcagcagggtccACCTCCATCCCAGCCTTCGTCTATGCCCTCGAGTGGGTCGGCCGGACCGGGATCGTTCCCGGGAGGGGTGGATGGGCGCGCGCCAACCGGGTTCCCTCCGCGAGCTTTCTTCCCGGACTTTTACATCCCACGGCCACCGCACTCGCAGCTGCAGGATCTTTTCGGGGCGGCCGCGAACGATTCGGCGGCGCGAAACCCGGTCGACCTGTCGCAGATGAAGAAACCGGAACCGCTTCCACCGACGCGGGACGCGACGCCCGAGCTGCGCCATTCTCCCGAGCTGCCGAACGAAGTGCTGCCGTCCGCCAAGATCAAGCAGGAGCCGATGGACGAGTCGCTGGATCTATCGGACAAGTCAACCAAAGTGGCGGCCGCGCCGACCAGATCGACGAGCACACCCATCCAGCACCACcgggatcgggatcgggaCCGGGAGCGCGACCACGAAGAGTCCAAAGACTCGTCCAAGGACGAACAGCACCTGATGGACCATTCGGATCAGCTGAAGGAGGACAGTGGGGCCGTTGGCGGTGGATCGCTGAGCGGCCTGAACAACTCGGCCAGCGAGAAGGAGTTCccgctgaagctgaagaacCACTCGATCGAGAACTTGGCCACCGTGCCCTCGGTGTCGCCGCCGTCGAGTTCGTCCTCGGGTTCGCTCTACCAGGACACGGTGCTGGATCCGTCGTTCTACGCGGCTCACCTGCCGCGGCCAGACAGCAACGACAGCTCGTGGGAGAACTTCATCGAGATCTCGTCGGAAACGTCGAAGCTGCAGGAGCTGGTGGACAACATCGAGAACAAGACGTCCGAGCCAAACCAGTGTCTGGTGTGCAAGAAGGTGCTGTCGTGCCGCAGCGCCCTGCAGATGCACTACCGCGTGCACACCGGCGAGCGTCCGTTCCGGTGCAAGATCTGCGGCCGGTCGTTCACCACAAAGGGCAACCTGAAGACGCACATGAGCGTGCACCGGATAAAGCCGCCGATGCGCACCCTGCACCAGTGCCCGGTGTGCCACCAGAAGTTCTCGAACATCTTCGTGCTCCAGCAGCACATCCGGCTGCACACGGGCGAGATGACCGACCTGACGCCGGACCAGATCAAGGCGGCCGAGATCAAGGACTACGAGGGCGGCGTGCCCCCGCCGCCGCATCCCGACGCTCTGCGGCTCAACCCGTTCGGCATGCGGCTGGCCAGCGagttccaccagcagcagcagcacctggcgcagcagcagcagcagcagcaacaccagcagcagctgcagcaccagcatcaacagcaccagcaccagcagcagcagaacaagCGCTCGCTGGAGCACTCGGACGAGGAGAACGACAACGACCAcgggccaccgccgccgccggtggaccGCGGGACGACCCCCATCGGCAAGATGCCCAAGGTGCCCATCCACGAGAAGCTGAAGGTCAAGGCGGGCCTCACGTCGCCGGCCATCGACAGCCAGGTGGAGGATCTCCGCACGATGAACCTCCAGCGGCTGTCGATGCGATCGCTGCCGCCCGCCGACGACTCCTTCTCGCGCGACTCCTCCTCCGCCAGcccgaccaccgccaccaccaccctcagCGCCGGGTCCGACGCGAAGCGGCTGCGCTCGTCCAGTCCCCCCTCGAACGCGTCCTCCTCGACGGGCCACTCGCGTCGCTCGCCCATCTCCACCCCGCCGACGATGAGCGGCGCCGAGCAGGCCAGTGCGGCCGGGCgagccgctgcagccgccgccgccgccgccgccgttgcctTCCCGTACGGGCCGCCCTTCCTCGGCATGCCCCAGTTCCCGCCGTTCATCAACCGGCCGCCATTCCTCGGCAATGTGCCGATCGGGCCGCCCGGCTCCAGCATGCCCCCGTTCGGCCTTTTCGGCGTCCGTGGAAACACAACAACTTGTAATATTTGCTTTAAAACTTTCGCCTGTAATTCCGCACTCGAAATTCATTACCGAAGCCATACGAAGGAGCGCCCATTCAAATGTACAATCTGCGATCGAGGATTCTCTACCAAGGGAAATATGAAGCAGCACATGCTCACTCACAAAATCCGTGATATGTTCGGCAACTCGGGTGGCAATTCCGGTGATGAGTCGCGCACGCAGACGCCACCGCAGGACAGCCATTCACAGTCGTCCAACGGATCCGAGtcgcaccaacagcagcagcaccagcagcagcatgatgGAGCTGCTCAGGACTTCTCCTCGTCGGGAGGCGGCCACCGATATGGCAGCGGAAGTCGGGAGCGATCCCGGTCGGCGGGGAGTTACGACGGGGTGCCGGGCTCCGGCGGCGGCTCCAGCAAGCGCGACAAGCACTCGGAAGCGATCGAAGCAGGAGGGCCGGGGTTGGCCACGCCGGACGAGAACGGCTCGAGCAGCCTGCAGTCGAGTGCGTCGGACCGGGGCAGCTCGCCCACGCCGCTGATGGCCGGAAGTGCTGCggccgtggccgccgccgccgctgccgcagccgccgccgccgcctcgaACAATAACTACAGCGAGTACATGGGCAAGGAGGCGGTCGACCTGAAGAACTGGTGCCAGAAGCTGAAGGAGATGCCGGAGAACATTGCCGCAAGTTGA
- Protein Sequence
- MKENGCIDNEGPIAKPSVQLLAKMSEGYAEKAARLNDHHLHHPHYQSAAATGRHQQEQLDRTDEIAHNEDNLSEDENNDDEEMMPGGSPSGAATGCEAALTDRESEHEAPAGESREDLKGLGSECVTGRSSPRSPVSLGRGGRASVGEALGAMLCGADRGEDSSTTAAAAAAAAAAAALGGPAAAAIAAAAAAAAASAAKGTSQGVGGAALSAADFNPAAAFGFPPAPSPAPGMSIQAFQNAIAQFTANALANNMDNDTVVKNLAILQSALFTLQQQQFLQFQLIQHLQSQLVKKHTEKEDAASSLHGGGLAGLAGGLGTGVDSATIGFLNNNNNNHNQHNHNKGGSQHHLQHHTNNASSRLQQHHQHLQQQQQQQQQQQQHHQQQQQHHHHHHQQQQQQQSLKNEPQDLRKSQPAAHHPIDADEEEEVEEEGIEDAFSKNYQMANMMAAAAAAAKSHVPNHVSELLRPSIHPVPEEELRKPKVSEASSIFGGGALPSPSAEKRTSNDSSVGQSGAVSVSLPSSAAQTASSTTSSMANAGGRSEEDTILTYHQEHAGSLGSFSSLAANIITDHAPLMLGEPNSLAMLEKKAQEVLNSASQGILSNNLLDELAFANDKSSPNGRNDAALFKHRCRYCGKIFGSDSSLQIHIRSHTGERPYKCNVCGSRFTTKGNLKVHFQRHSDKYPHIPMNPNPVPEHLDKYFPPLIPQEALKEQQQQQQQQQQQQQQQQGPPPSQPSSMPSSGSAGPGSFPGGVDGRAPTGFPPRAFFPDFYIPRPPHSQLQDLFGAAANDSAARNPVDLSQMKKPEPLPPTRDATPELRHSPELPNEVLPSAKIKQEPMDESLDLSDKSTKVAAAPTRSTSTPIQHHRDRDRDRERDHEESKDSSKDEQHLMDHSDQLKEDSGAVGGGSLSGLNNSASEKEFPLKLKNHSIENLATVPSVSPPSSSSSGSLYQDTVLDPSFYAAHLPRPDSNDSSWENFIEISSETSKLQELVDNIENKTSEPNQCLVCKKVLSCRSALQMHYRVHTGERPFRCKICGRSFTTKGNLKTHMSVHRIKPPMRTLHQCPVCHQKFSNIFVLQQHIRLHTGEMTDLTPDQIKAAEIKDYEGGVPPPPHPDALRLNPFGMRLASEFHQQQQHLAQQQQQQQHQQQLQHQHQQHQHQQQQNKRSLEHSDEENDNDHGPPPPPVDRGTTPIGKMPKVPIHEKLKVKAGLTSPAIDSQVEDLRTMNLQRLSMRSLPPADDSFSRDSSSASPTTATTTLSAGSDAKRLRSSSPPSNASSSTGHSRRSPISTPPTMSGAEQASAAGRAAAAAAAAAAVAFPYGPPFLGMPQFPPFINRPPFLGNVPIGPPGSSMPPFGLFGVRGNTTTCNICFKTFACNSALEIHYRSHTKERPFKCTICDRGFSTKGNMKQHMLTHKIRDMFGNSGGNSGDESRTQTPPQDSHSQSSNGSESHQQQQHQQQHDGAAQDFSSSGGGHRYGSGSRERSRSAGSYDGVPGSGGGSSKRDKHSEAIEAGGPGLATPDENGSSSLQSSASDRGSSPTPLMAGSAAAVAAAAAAAAAAAASNNNYSEYMGKEAVDLKNWCQKLKEMPENIAAS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00109352; iTF_00096587;
- 90% Identity
- -
- 80% Identity
- -