Basic Information

Gene Symbol
blmp-1
Assembly
GCA_034621735.1
Location
JAOEFI010000007.1:11213275-11218178[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 14 1.6e-06 0.00014 22.2 2.5 1 23 217 239 217 239 0.99
2 14 0.015 1.3 9.7 0.5 1 23 247 270 247 270 0.98
3 14 2.5e-05 0.0022 18.4 1.1 1 23 289 312 289 312 0.93
4 14 1.1e-05 0.00096 19.6 0.1 1 23 466 488 466 488 0.98
5 14 3.6e-05 0.0032 17.9 0.7 1 23 494 516 494 516 0.99
6 14 0.0099 0.87 10.2 2.5 1 23 612 634 612 634 0.98
7 14 5.9e-06 0.00052 20.4 0.4 1 23 640 662 640 662 0.99
8 14 1.9e-05 0.0017 18.8 0.1 1 23 752 774 752 774 0.95
9 14 0.0041 0.36 11.5 4.1 1 22 780 801 780 804 0.90
10 14 4.9e-07 4.4e-05 23.8 0.8 1 23 972 994 972 994 0.99
11 14 0.00011 0.0099 16.4 4.0 1 21 1000 1020 1000 1022 0.94
12 14 0.00063 0.056 14.0 0.9 1 23 1256 1278 1256 1278 0.98
13 14 1.9e-06 0.00017 21.9 2.3 1 23 1284 1306 1284 1306 0.99
14 14 0.0025 0.22 12.1 1.2 2 23 1313 1335 1312 1335 0.92

Sequence Information

Coding Sequence
ATGGTGCTGaaggcggagaaaaaagacgacgacgacgaatgcagcggccaccatcatcacggTGGCACcgttgcagcagctgctgctgcctctgcGGTTACGGCGACTTTACCGGATGGAAAGCGtcatggcgatgatgacgatggcaacTCCGACCAGGAGATAGTGGAAGTTGGCATCGACGAGGACCACATTAAGTTTCTCACCAGCATGCACTCGGGCGACGAGGATCTGGCGAACGGGAACCACCGTGCCCCGGGACGACAGCGCCCCACTGTGAACGGTGTTGCACACGCGAATGGGGCTTTGGCAGCCGGAGCACGGCGCTACcgcgctggtgttggtgataCGAACgatgtcatcgtcgtcggtaaCCGCAACCGGCAGCACCTGGGCCAACTACCTGCTCCCCATCGACAGAACGGCATTTTCAACGGCAATCGTGGCAAACTTCAGCAGCGGGTCAACGGAGCAAGTACTGAAGAACTCGTGTACAGCGACGATGATTCGGACGACGATGccgaggacgatgatgacgacgacgacgatgacgacgatggcgaggaTGTGATGGCCGTCGCCGCTAACATCCTATCGAAGACGGCCCAGAGGTCATCGTTGTTCAATGGCGGCGGTGCGGTTCGAACGTATCAGTGCGACGTGTGCTCCCGGACGTTTCAGCGAGCGGATCACCTGCGCTACCACATGCGCATCCACGAGAAAGGCAGCAGCAATCCGTTCGAGTGCAAGCTGTGTTTTAGCGTGTTCGCGTCGGATCCCGCCTTCGCGCACCACATTCGCACGGAGCACGCCGGAATGGGGCTGGCCGACGCGCTACCTCCGGTGCCGGAATCGGAAGCCCAGCATGCCTGCACGTACTGCGACAAATCGTTCGCCGACgcggacgagctggaggatcacctgcatcagcagcatctcgGTCAACAGTACCAAGAGCCAcggcatcaacatcatcatcagcagcaggagcagcagcagcagcaccaggagcagcaggagcaacagcagcagcatcagtacGATCACTCTTCTCCCGACGACAGCCTTTTCGGGAATCCATGCGCCAAACGACCTCGTTTGATGGTACGCAAGATGGAAGACCTACTAGAGAACAGTATGTCGATGAAGAGTGCATTTCGTCGCACTTCCCACACCGGAACAGTGACGACCGGAAGCATGTCCAGCGACGATcgcgacgaggaggacgatgatgatggggacGACGAAGGAACCGGCGCCGAAAGTGCGACCGATCATCAGCGGCTTCTACTGAGGAAAGGAATCGTTGGCGACGTTGGCCGTAGTTTGCTGCCGAAAGTTGGCGGAATGAACAAGAAGGTCACCCCGGAACTGCCGGCGGATGAGGTTGGCCGATACAGTTGCCCGGTGTGCAACCGAAGATTCGTTCGCGAGCCGGACCTCATGCTGCATGTACGGATGCATCCAGaCCTACCCACGTTCAAGTGCCCACTCTGCGAGCTGACCTTTATCGGATCGGACTATTTGAAAACCCATCTCAAAAAGCACGTGCTGGGAAACGGTGAAGATCCGAACGCCCCTGGTGCAATTGATTTGAAAGCAGTCGTCGATCCGGCGGGAGCACCTACAGACACAGTTGTTACAAACGGTTCGGCCAGGCGCGCTGAGGGCGGTGGAGGACCAGATGCGCGGGCTGCTTCCTCTACCGCTAAGCTTCCCAAACCGATCATTACGTCAAAACCACCATCCTCTGGGATCTCACTGTTGAAGCCcatcgaagaaagaaaaccacccgaCCAGCAGGAGTATTGCGTAAAAACATCTGACGGCAAGTTTATGTGTACGGTTTGCGAGCGGCTCTTTTCGCACCAGCAAACAGTACGCATCCACTTCCGGATCCACACAAACGAGAAACCATACAAGTGTGCATACTGCGCGGAGTCATACATTCGCTCGGATTACCTTGAGCGCCATATGAAGGTTCACTTCAAGGATGGGATACTGCCGGCGGCCGCAATTGCCAGTATGGTtgcggcggcagcggctgctgccTCGTCCAATGCCGATCCAGTCGGCACTGTACGACCCGTTACCATAGCCTCTCCTCTTCCCACGGCAGTCTCGGCAAAGGAAGACATTCCTGACCCACCCACGGCTGCTCCATCACCGGTGAACACCACGACAAAACCGCTGATCGGTCGTGCCGGTCTGGCGCCAGAGAACTATCACTTCACCGAATCGAACGACGGGCAGTTTGTGTGCAAGATCTGTGACAAGGTGTTCAACCAGGTGGCCCTGCTGCGCAAACACGCCTTAGCGCACACCGAGGAGAAACCATTCCACTGCGACACCTGCGATCGGTCCTTCAACAGGGTCGACTACCTGAAGGAGCACTTTAAATCGAAGCGGCACCTGCAGTTGCTGGCGGAAGCGGCAACCGCCGGGGATAGCTCCTCGATTCCGCAGAACCGTgtcgacgaagaggacgactCTACGATGGACAGCTTGTCAGTGTCAGTACCCCAGTTGCCATCCCAGATTCGGTCCAAGGGAACAACAGCTACTGCAACCGTGGTCGTTGGTGGGAGTGTCAAAAGCAGCACTAAATTAAGACCTTCTTCAGGAGGCGGGGGAACCGCGGAGAACAATGGACACCGCTCGGTGCTTGGAGTTAAGAGCAGAAATGGCAGTAgttgtagcagcagcagcagtagtagcagcagcagtaccagtagtagtagcagaagcaatagtagcagcaacaacaaagccCACACCACTAATGCCAACGCCacgaacaccagcagcagtgggcAAGCGAAATCCAATCCCTCGCCGACGATGAACGACGAGGCTCGGTTGGTGTTGGGCGAGTTCCATCGGTCAGACTACGAGCGTACCGGCGATGGGCGGTACAAATGTAACCAATGTGATAAGACGTTCGTCACGGCGGTTACGCTCAAGATGCACATTCGATTGCACACGGGAGAAAAGCCGTACAAATGCGACAAATGTGATAAGGCGTTCATACGCTCGGACTATCTGAAGACGCACGAGAAGTGCCACCGGCAGGAATCGTTTCTGAGCATGCTTTCGCTAACGACGTCGAAAGAGCCCAGTACTGCCTCGGAGGCCGGTGACtccgatggtgctggtggtggaagaggCGGTTTTCGTGATAGGGGTCATGAGATGCGAAGTCCCGCTTCTATTGTTGAAGCAAGGGATGCTGCTAGCGATGAAGACGAAGATCAGGATGAGGATGAGGTGGAagagggggaggaagaagaggacgaATCGGGAGATGACGGCGAGGAATCTGAGGAGAGTGAAGATGAACAGGTGATTGAGGTTATGGTCAAGGAAGCTAGTTGCTCGGAAACCGATGATGAggccgatgacgatgaagaagacgccgacgaggaggaggatgaggaacaagaggaggaggaggacgaggacgaggatgaGGAGAATGGAGGACACGCTGGTGGGCCGCAGCAGTATGGGAGCAACAGTAACAGTACAAATCGATTTATTGCCGGCAGAATGAACGATTCCAGCGAACGGCAAAAGGAGAGCGGGAGTGCGTCGTCGAAACGGGGCAAACAGCGGCATAAAGGTTCTCCATCGGATCGTTCGCTTGCGGCCAGCGGTGGCGATAGCAGTAACAACGGATACGACAACGAGGACGATAGTATGTCTCAGACAAGCGGGCATGGCGTTGGAAACTACTCGGAACTAGCGCaaaatcaaaaaggaaaacatcgatGCCCGATGTGCAATAAGCTGTTTGCGTGGCCCAAATCGTTGAAGATTCACGTCCGGACGCACACGGGGGAGAAACCGTACAGCTGTGACGTCTGCGGCAAGTGTTTCGGGCGGTCGGATAGTTTGCGTGGCCACAAGCGAACACACGTCGACGAGCGCCTGGTGCAGTGTCATTTATGTGATATCAGCTGCACCAACGCCACTGAGTTGTTACAACATCAGTACGCGGTCCACGGAATACAGCCGCTGGAAAGTTAG
Protein Sequence
MVLKAEKKDDDDECSGHHHHGGTVAAAAAASAVTATLPDGKRHGDDDDGNSDQEIVEVGIDEDHIKFLTSMHSGDEDLANGNHRAPGRQRPTVNGVAHANGALAAGARRYRAGVGDTNDVIVVGNRNRQHLGQLPAPHRQNGIFNGNRGKLQQRVNGASTEELVYSDDDSDDDAEDDDDDDDDDDDGEDVMAVAANILSKTAQRSSLFNGGGAVRTYQCDVCSRTFQRADHLRYHMRIHEKGSSNPFECKLCFSVFASDPAFAHHIRTEHAGMGLADALPPVPESEAQHACTYCDKSFADADELEDHLHQQHLGQQYQEPRHQHHHQQQEQQQQHQEQQEQQQQHQYDHSSPDDSLFGNPCAKRPRLMVRKMEDLLENSMSMKSAFRRTSHTGTVTTGSMSSDDRDEEDDDDGDDEGTGAESATDHQRLLLRKGIVGDVGRSLLPKVGGMNKKVTPELPADEVGRYSCPVCNRRFVREPDLMLHVRMHPDLPTFKCPLCELTFIGSDYLKTHLKKHVLGNGEDPNAPGAIDLKAVVDPAGAPTDTVVTNGSARRAEGGGGPDARAASSTAKLPKPIITSKPPSSGISLLKPIEERKPPDQQEYCVKTSDGKFMCTVCERLFSHQQTVRIHFRIHTNEKPYKCAYCAESYIRSDYLERHMKVHFKDGILPAAAIASMVAAAAAAASSNADPVGTVRPVTIASPLPTAVSAKEDIPDPPTAAPSPVNTTTKPLIGRAGLAPENYHFTESNDGQFVCKICDKVFNQVALLRKHALAHTEEKPFHCDTCDRSFNRVDYLKEHFKSKRHLQLLAEAATAGDSSSIPQNRVDEEDDSTMDSLSVSVPQLPSQIRSKGTTATATVVVGGSVKSSTKLRPSSGGGGTAENNGHRSVLGVKSRNGSSCSSSSSSSSSSTSSSSRSNSSSNNKAHTTNANATNTSSSGQAKSNPSPTMNDEARLVLGEFHRSDYERTGDGRYKCNQCDKTFVTAVTLKMHIRLHTGEKPYKCDKCDKAFIRSDYLKTHEKCHRQESFLSMLSLTTSKEPSTASEAGDSDGAGGGRGGFRDRGHEMRSPASIVEARDAASDEDEDQDEDEVEEGEEEEDESGDDGEESEESEDEQVIEVMVKEASCSETDDEADDDEEDADEEEDEEQEEEEDEDEDEENGGHAGGPQQYGSNSNSTNRFIAGRMNDSSERQKESGSASSKRGKQRHKGSPSDRSLAASGGDSSNNGYDNEDDSMSQTSGHGVGNYSELAQNQKGKHRCPMCNKLFAWPKSLKIHVRTHTGEKPYSCDVCGKCFGRSDSLRGHKRTHVDERLVQCHLCDISCTNATELLQHQYAVHGIQPLES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-