Aplu005984.1
Basic Information
- Insect
- Anopheles plumbeus
- Gene Symbol
- TBK1
- Assembly
- GCA_034621735.1
- Location
- JAOEFI010000004.1:27024569-27081429[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 1.5e-08 1.4e-06 28.5 3.3 1 23 900 922 900 922 0.98 2 13 2.3e-06 0.0002 21.7 6.6 1 23 928 950 928 950 0.98 3 13 1.4e-06 0.00012 22.4 5.4 1 23 956 978 956 978 0.98 4 13 2e-06 0.00018 21.8 5.7 1 23 984 1006 984 1006 0.98 5 13 3.4e-06 0.0003 21.2 6.7 1 23 1012 1034 1012 1034 0.98 6 13 4.2e-05 0.0037 17.7 6.7 1 23 1040 1062 1040 1062 0.98 7 13 1.2e-07 1.1e-05 25.7 4.6 1 23 1068 1090 1068 1090 0.98 8 13 3.7e-07 3.3e-05 24.2 5.5 1 23 1096 1118 1096 1118 0.98 9 13 4.9e-07 4.3e-05 23.8 7.7 1 23 1124 1146 1124 1146 0.98 10 13 3.2e-05 0.0029 18.1 8.0 1 23 1152 1175 1152 1175 0.95 11 13 2.7e-05 0.0024 18.3 0.6 1 23 1181 1203 1181 1203 0.98 12 13 0.0029 0.26 11.9 3.8 1 23 1213 1235 1213 1235 0.99 13 13 0.0011 0.095 13.3 4.3 1 23 1241 1264 1241 1264 0.96
Sequence Information
- Coding Sequence
- ATGAACTCGTTCCTACGAGGATCGATGAACTACGTCTGGTGTACGACCAGCGTACTGGGCAAGGGGGCCACCGGGGCCGTCTTCCAGGGTGTGAACAAGCACAACGGGGAGCCGGTGGCAGTCAAAACGTTCAACCAGCTCAGCCACATGCGCCCACCGGACGTGCAGATGCGTGAGTTCGAAGTGCTGCGAAAGGTGAACCACAACAACATCGTCAAGCTGCTCGACATCGAGGATGATCAGGAGGGCCGGGGCAAAGTTATCGTGATGGAGCTGTGCACGGGAGGGAGTCTATTCAACATTCTCGACGACCCGGAAAACACGTACGGGTTGCCGCAGCGCGAGTTTCTGCTCGTGCTGGAGCACCTGTCCGCCGGCATGAAACACCTGCGGGACAATAATCTGGTGCACCGAGATTTGAAACCAGGCAACATCATGAAGTACATCTCGGAAGACGGTCAGACAATCTACAAGCTAACGGACTTCGGGGCAGCCCGTGAGCTCGGTGAAAACCAACAATTTGCCTCGCTGTACGGAACGGAGGAGTATCTCCATCCGGACATGTACGAACGGGCGGTGCTCCGGAAGTCCATCAATCGGAGCTTCACGGCGAATGTCGATCTCTGGTCGATCGGTGTTACGCTGTACCATGTCGCCACTGGGAACCTTCCCTTTCGTCCGTACGGAGGGCGtaaaaacaaggaaacgatGTACCACATCACCACTAAGAAGGCACCGGGTGTCATCGCCGGAACGCAAACGAGCGAAAACGGACCGATCGAGTGGGCGAAGACACTACCGGCCCATTGCCAGCTGAAGGAGGGACTGAAATATCTTGTGACACCACTGCTGGCGGGCCTGTTGGAGGAAAGCCAGGGACGGATGTGGTCGTTCGATAAGTTTTTCGTCGAGGTGCAAAACATTCTAAACAAAACGGTGCTGCATATTTTCTACGTCAACCGTGCGACCTCGATTGAGGTGTACATGGAACCAGAGCAAACTTTCATGCACCTCCGGGAACATATCCTGGCACAGACAGACGTTCCACAGCCGTcgcagctgttgctgctggagaatGAGCTTTTCGAGAGGAAGGTAGATGCCAACACGAGCGCGCGCGGCTTTCCTCCCACCGAATCTACCATCCCTGTGATGCTTTTCAACATCGAGAACTACAATGTCATCCTGCCGACCGAGTGGGATTTGCCAAAGTTTCCTACATTTCCGAACGGCATTTCGGTGGAGAACGATGCCAGCCTGGCTAAGGTGGCTTGCAGCGTTGGGCACGAGTGCAAGCGGAGAGTGGAGAATCTGTCCCTGCTGGACACACTGATGAACAAATCCGTTCACCAGTTTTCCGGGTTCCTCAGCGGGCTGCTGGTGAATCTACTGAAACGTACACATCATCTAGAAGAAATTGAAGGACTTATCTGCGAGCTGGCGAAAATGTTCGAAGTAGCCGCATccaatCATGACACATATCAGAAGGTGGCCACTAGCATCCTCGCTAGTTACGAGAAACAAAAGTCCGACTTCCAGCGCGTCTCCGAGCCGATCCATCAGCTCTACACGCGCTTTGTCAAAGAGGAATCGCTCGTGCGCGAGTGGAACTCCGGCTACCGGGCACTCCGTacgccaaacaaaaaccgtgATAGCGAGAAGTCAAAATCGCTCGTCGATCGACTTCGTGACTCCTGGCAGCACATGCTGCGCGACCGAGCGACACGCGCGCTCACCTACAACGACGAGCAGTTCCACGTGCTGGAAAAGGTGAAGATCGCCGAAACGGGCAAACGCCTCAAGGCCCTGCTGAACGATGCCGTCCGGCAGGCAGTTGAGCAAGAAGCAGAATGTTTGGCCGACTGGTACAAGAAGGCGCAGACCATCTTCCTGCAGACGCAGTTTCTTCTCAAGGACGTCGGATCGTACGTGGACGCGATGTACGATGCGAGAGACCAGCTCAAGCAGCACCGGGAGGATCTGAAGGAGGAAATCAGCACCGACGGTGAGGTATCAACAACGATCGGTTCCAACAAGCCAATGGTGCCCCCCACAATCCCCTCGCTGGATGACGGCCCCGCAACCGGGACGAGTTCGAGCGAGAAAGGTTCAACCGCCCGCAACAATCAGTATAAGCTGCTGTGTTTCATGGGTCGTCACACCTCACCAACCTGTCTGGCCCTGCTGCTACCCATAGCAGCAGGGGCAGCACAGGTCATCTCCCACCTCCACCGGGATCACACCTTCAGCAACTCCATGGGTCTGGAGTACTTGCGGATCATACGAAATTACAGTATTTGGGCAACATGCAGCGGCAGCGGAGGCCACCatccgccgcccccgccgtcGCAGGGCCCACCGCAGTCAGCCCACCCGCCGCCCCCGCAGCCGATCCCGATCGTGAAGCCGGAGTTCAAGGTGCCGCCGATACCGGCCCACCTGATGGACGTCCGCGGCCCGGACGGTTCGATCGTCAAGATCAACATGCCGGAGCACCACGACCCGAGCAAGCCGCCGAACAACGTGGAGATGCTGAAGGTGAACATCGAGGATCTCAGCCAGTTTCTGTCGTACCATGAAGTCTTCGGAAAGCTCCCTTCCGACATGCTAACGGGCCCGTCCGCTAGCCTAGTGCCATCGTCGTCCACCAACACCGCAACGACCAGTGCGCATAGCAATGGTAAATGTGAATCGCCTTACCGATGTCCGTACTGTGGCAAAACGTTCACCCGGAAGGAACATCTAACCAACCACGTCAgATTGCATACCGGAGAAACTCCGTACCAATGTACGTACTGCCAGAAGAAATTCACGAGAAAAGAGCATTTAACGAATCACACCAGATTGCATACGGGCGAAACTCCTTACCAGTGTTCTTATTGTCAGAAGAAGTTCACGCGCAAAGAACACCTCACGAATCACGTCAGACTACACACCGGAGAGACTCCCTACACGTGTACCTATTGTCAGAAGAAGTTCACGCGTAAAGAGCATTTGACGAATCACGTCAGaTTGCACACTGGCGAGACTCCCTTCCAGTGCACGTATTGCCAGAAGAAGTTTACGAGAAAAGAGCATTTGACGAATCATACCAGATTACACACCGGGGAGACTCCGTATCACTGCACCTATTGCGAGAAGAAGTTCATGCGAAAAGAGCATTTAACGAATCACATCAGATTGCACACCGGAGAAACTCCCTATCAGTGCACGTATTGCGGGAAGAAATTCACCCGAAAAGAGCATTTAACAAATCATGTCAGATTGCATACCGGAGAGTCTCCCTATCGGTGTTCGTACTGTAACAAGTCCTTCACCAGAAAAGAGCACCTCAAGAACCACGTCAGATTGCACACCGGCGATTCACCGCACAAGTGTGAGTACTGCAACAAAACGTTCACGCGGAAGGAACACCTGAACAACCACATGCGCCAGCACAGTGGCGATAATCCGCACTGCTGCAACGTGTGCAACAAGACGTTCACTCGCAAGGAGCACCTGATCAACCATATGAGCCGATCGCATACCGGCGAACGACCGTTCCAGTGCGACGAGTGCGGCAAGTCGTTCCCGCTCAAGGGCAACCTGCTGTTCCATCAGCGCAGCCACACCAAGGGTCAGCCGATGGAGCGGCCGTTCCGGTGCGACATGTGCCCGAAGGACTTCATCTGCAAGGGCCATCTGGTGTCGCACCAGCGGTCCCACACGGGCGAGAAGAACCATCACTGCCCGCAGTGCAGCAAGTCGTACGTCGAGCGGGGCAACATGCTGCGGCACATGAAGAAGACGCACCCGGACGCGGTCATCCCGGTGCTGCCGAAGCTGCCCCACATCAAGGTCGAACCGAAGTCTACCGTATCTCAGCCCACGTCCGTGGTGACGTCGCCGGCTCAGGCCGCACCAACAATTGCGTCGATTATCTCCAATACTCATCCATCGCAGCATCATCACATTCaaccgaaaatggaacagaaatcTCAGATACATCATCTTCCGATTCCTCATCAGCATCCAGCTCACCAGCTGCACCACCACACCTTGGCgggcccccaccccccgatGCATCTTCCGCCGCCAAACCCACAGCAATTGGCGGCGCTCGCCCTCCATCATcaggtccagcagcagcagcaacaacagcagcagcaacagccgccgcAATCTTCGCCTTCAACGGGACGAACCCAGCCATCCCCTCGTACATCacatccgccgccgccgcatccacagcagcagccacagcagcagcagcagccggaaaacCTCCAGCAACCGGGACCGGGCCCAGCTGGACCCCTTCCACCTCAGCACCATACGGTCCCGGTTACTATTATAACCCATGCTGGAAGCATTAATCCGAACATGCCACCGAACGTGGTGGACggtagcggcggcggtggtggaggggggcCCGGTTTGCAGCAGGGTCAGAGGGTGGGTGCGATCCAGATGCACCATCTGACCGCGGCCCAGGCGCCGGAGGAGCACTCGGTGGTTTATTGA
- Protein Sequence
- MNSFLRGSMNYVWCTTSVLGKGATGAVFQGVNKHNGEPVAVKTFNQLSHMRPPDVQMREFEVLRKVNHNNIVKLLDIEDDQEGRGKVIVMELCTGGSLFNILDDPENTYGLPQREFLLVLEHLSAGMKHLRDNNLVHRDLKPGNIMKYISEDGQTIYKLTDFGAARELGENQQFASLYGTEEYLHPDMYERAVLRKSINRSFTANVDLWSIGVTLYHVATGNLPFRPYGGRKNKETMYHITTKKAPGVIAGTQTSENGPIEWAKTLPAHCQLKEGLKYLVTPLLAGLLEESQGRMWSFDKFFVEVQNILNKTVLHIFYVNRATSIEVYMEPEQTFMHLREHILAQTDVPQPSQLLLLENELFERKVDANTSARGFPPTESTIPVMLFNIENYNVILPTEWDLPKFPTFPNGISVENDASLAKVACSVGHECKRRVENLSLLDTLMNKSVHQFSGFLSGLLVNLLKRTHHLEEIEGLICELAKMFEVAASNHDTYQKVATSILASYEKQKSDFQRVSEPIHQLYTRFVKEESLVREWNSGYRALRTPNKNRDSEKSKSLVDRLRDSWQHMLRDRATRALTYNDEQFHVLEKVKIAETGKRLKALLNDAVRQAVEQEAECLADWYKKAQTIFLQTQFLLKDVGSYVDAMYDARDQLKQHREDLKEEISTDGEVSTTIGSNKPMVPPTIPSLDDGPATGTSSSEKGSTARNNQYKLLCFMGRHTSPTCLALLLPIAAGAAQVISHLHRDHTFSNSMGLEYLRIIRNYSIWATCSGSGGHHPPPPPSQGPPQSAHPPPPQPIPIVKPEFKVPPIPAHLMDVRGPDGSIVKINMPEHHDPSKPPNNVEMLKVNIEDLSQFLSYHEVFGKLPSDMLTGPSASLVPSSSTNTATTSAHSNGKCESPYRCPYCGKTFTRKEHLTNHVRLHTGETPYQCTYCQKKFTRKEHLTNHTRLHTGETPYQCSYCQKKFTRKEHLTNHVRLHTGETPYTCTYCQKKFTRKEHLTNHVRLHTGETPFQCTYCQKKFTRKEHLTNHTRLHTGETPYHCTYCEKKFMRKEHLTNHIRLHTGETPYQCTYCGKKFTRKEHLTNHVRLHTGESPYRCSYCNKSFTRKEHLKNHVRLHTGDSPHKCEYCNKTFTRKEHLNNHMRQHSGDNPHCCNVCNKTFTRKEHLINHMSRSHTGERPFQCDECGKSFPLKGNLLFHQRSHTKGQPMERPFRCDMCPKDFICKGHLVSHQRSHTGEKNHHCPQCSKSYVERGNMLRHMKKTHPDAVIPVLPKLPHIKVEPKSTVSQPTSVVTSPAQAAPTIASIISNTHPSQHHHIQPKMEQKSQIHHLPIPHQHPAHQLHHHTLAGPHPPMHLPPPNPQQLAALALHHQVQQQQQQQQQQQPPQSSPSTGRTQPSPRTSHPPPPHPQQQPQQQQQPENLQQPGPGPAGPLPPQHHTVPVTIITHAGSINPNMPPNVVDGSGGGGGGGPGLQQGQRVGAIQMHHLTAAQAPEEHSVVY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -