Basic Information

Insect: Anopheles plumbeus
Gene Symbol: -
Assembly: GCA_034621735.1
Location: JAOEFI010000004.1:2357124-2372193[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.00014 0.013 16.0 2.1 1 21 169 189 169 190 0.95

2 18 6.9 6.2e+02 1.3 0.2 1 16 197 212 197 214 0.88

3 18 1.7 1.5e+02 3.2 0.2 2 13 223 234 222 236 0.86

4 18 1.2e-06 0.00011 22.5 4.3 1 23 627 649 627 649 0.99

5 18 3.8e-07 3.4e-05 24.1 0.5 1 23 655 677 655 677 0.99

6 18 9.8e-06 0.00087 19.7 0.2 1 23 683 705 683 705 0.98

7 18 3.7e-05 0.0033 17.9 0.6 2 23 711 732 710 732 0.96

8 18 1.2e-07 1e-05 25.8 3.7 1 23 738 760 738 760 0.99

9 18 0.023 2 9.1 4.4 1 23 833 855 833 855 0.98

10 18 5.8e-06 0.00051 20.4 2.5 2 23 862 883 861 883 0.98

11 18 1.8e-06 0.00016 22.0 0.8 1 23 889 911 889 911 0.98

12 18 2.3e-06 0.0002 21.7 0.1 2 23 917 938 916 938 0.98

13 18 1.4e-06 0.00013 22.3 3.8 1 23 944 966 944 966 0.99

14 18 8e-07 7.1e-05 23.1 1.7 1 23 1016 1038 1016 1038 0.99

15 18 3.2e-07 2.9e-05 24.4 0.9 1 23 1044 1066 1044 1066 0.99

16 18 5.2e-05 0.0047 17.4 0.2 1 23 1072 1094 1072 1094 0.98

17 18 4.2e-06 0.00038 20.8 0.3 2 23 1100 1121 1099 1121 0.97

18 18 2.9e-07 2.6e-05 24.5 0.8 1 23 1127 1149 1127 1149 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.00014	0.013	16.0	2.1	1	21	169	189	169	190	0.95
2	18	6.9	6.2e+02	1.3	0.2	1	16	197	212	197	214	0.88
3	18	1.7	1.5e+02	3.2	0.2	2	13	223	234	222	236	0.86
4	18	1.2e-06	0.00011	22.5	4.3	1	23	627	649	627	649	0.99
5	18	3.8e-07	3.4e-05	24.1	0.5	1	23	655	677	655	677	0.99
6	18	9.8e-06	0.00087	19.7	0.2	1	23	683	705	683	705	0.98
7	18	3.7e-05	0.0033	17.9	0.6	2	23	711	732	710	732	0.96
8	18	1.2e-07	1e-05	25.8	3.7	1	23	738	760	738	760	0.99
9	18	0.023	2	9.1	4.4	1	23	833	855	833	855	0.98
10	18	5.8e-06	0.00051	20.4	2.5	2	23	862	883	861	883	0.98
11	18	1.8e-06	0.00016	22.0	0.8	1	23	889	911	889	911	0.98
12	18	2.3e-06	0.0002	21.7	0.1	2	23	917	938	916	938	0.98
13	18	1.4e-06	0.00013	22.3	3.8	1	23	944	966	944	966	0.99
14	18	8e-07	7.1e-05	23.1	1.7	1	23	1016	1038	1016	1038	0.99
15	18	3.2e-07	2.9e-05	24.4	0.9	1	23	1044	1066	1044	1066	0.99
16	18	5.2e-05	0.0047	17.4	0.2	1	23	1072	1094	1072	1094	0.98
17	18	4.2e-06	0.00038	20.8	0.3	2	23	1100	1121	1099	1121	0.97
18	18	2.9e-07	2.6e-05	24.5	0.8	1	23	1127	1149	1127	1149	0.98

Sequence Information

Coding Sequence: ATGGATGTTTTCGACACGGCGGATTTTAATCCGGAGCTCATCCTGTCCAGTGTGTTCCTGGATCCGGGGCTAGATTTTGTTGCCAACATCGACGATCTTGGCGACAGCATCATGGCTCCGGACATGCTGCAGCACTTGGGAAACTCCGTATTCTACGCAGAAAATACCTGCACCACTAGCAACAGCCAGAACATCGAGGGAGTTCCTAGCGACGAATGCCACCAGCAACTTGTACAGAACCAGCtacatcatcagcagcagccaacaGCATCACAACAAGCACCGAACTTGATCACATCCAGGGCTCATGCAACAGTTGAGAAACACACCGAGGAGCTAGGTTACGAGCCGTTTGGAAGCGATTACAGCAAGCAGCTCCCGCCGGGCATGCCGTTGGCGATGGTTATtccagcagcgcagcagcaacagcagcagcagccttgCAAATGCGAGTTCTGCGAGTATCTGCAAGCCAACCGTATTTCGCTCACCGGGGACCACTCCTTCCAATGCGAGTTCTGTGGCGAAGGTTTCTCCAATCAGACCAGCTTCAATCGGCATCGCTGTGGAAGTACGGATATTCAGATGTACCGCTGCGAAAGTTGCCGCCGGGAGTATGGCAGCTCGCGGGCCCTGTCCTCCCTTGGGAACTGCGAGCAGCGCGATAAATGTGACCTCTGCAATCGAAGCTACGAGCAAGCGCATACGGAGGGGCCGGGGACCTATGGTAGTGCCTCCCAGGTGGTCTCGAACGCGATCCCCACGGCGAATTTTCCCGCCAAAACACTCGGGTTCAGTACAACTAGGATCCGTCCCGGGGAAGCCGTCGTTACATTGCCCGCATCAGTCGATGTGTCCCTCGTAACCACCCCCTTCTCGGCAGTGGCTATGGCCGCGTCTTCCGAAGCTTCCACTGGCAGCGCAGGCGATCGCATCGTGATAAACGTGCAATCCATTCTGGACAGCCCTACGGAGCAGCACGATCTCAGCAGTATCGACCCATTCGGGTCCGATAGCGAATGTATTGGAGATTTTTTTGGCGCCGGTGCTACGGACGCCAGCGATGAGACCTCATCGCTCGCCACGGCTCCCTCAAGTAGCACCAACACCGGTGCCGCCCTAGGCACTCCTCCCTCCCTCGGAACGCCTACCTTACACCACCCGGAATCCGCCAAAACGTACTTTGTGCTTGGAAACGTGGAACAGCTTCAACAGCGCCAGCCGCAGCAAGcgtgcagcaacaacaacaacagcaatagcAACGTGCAACCTGCCACCAATAGCTTCCATTACCTGCACCTTCCTCAGACGACAGTTCCTCATCAACAGCAGCCGTTGCCACCGGGTTCGCTGCAGACCGCACCGACGGGCTCCCTACTGCCTAGCGAGCACGAGGTGACCAGTCTGCAGCAGTATGATCAGTACGATGATGAGGACTACTCGTCCATGTCCGAAGATGAAGCTATTGTTCCAATAGAGCCTTATGCCAAGTCGCCCAACCAGGAGCATGCCAAGACGGAGTTGCCCATCCAGGAGACGATCGTGGACACCAGCAGCAGAGTAGCGCACTTCACTGGAGCATTGGCGAACGATCTATCGTCGGCGAAGGTCACATCTCTGAGCCAGTTTCTAGCCCATGGACTCGATGGTTCCCAagagcaccaacagcagcataaCCCTCacctgcagcaccagcagcaccagcagcatcttctgcagcagcttgACGCAACAATCAGCCTGACAAGGTtggacgatgatgaggaagGGAAATGCGATTCGTCATCGTCACTGCGGCCGCTTTCCATCGGAGCCGCCGGAGGAGAACTGCAGCATCCCGCCGGCGGAGCAGCGAGCAACTCCTCCGTCGAGCGGCCCTACAAGTGTCACATCTGCGAGCGCTCCTACCGCAATCAAAAGAACCTCAAGTCCCACCTCAAGGTACACGAAGGAATTCGGGCATATCAGTGCGAAATTTGCGGCAAGAATTTCTCCGGCTCCAGCTACCTGGTGATCCACCGACGGCGACACACCGGCGAGAGGCCGTTCAAGTGCGCCACCTGCGGGAAGGCGTTCGTCGATTCGCGGGCCCTGTCGGTGCACACGCGGCTGCACAGTGGCGAGCGGCTGAAATGTGACAAGTgcgagaaaactttctccagcGTCAGTGCCCTGACTGTGCACAATCGCCTGCACACCGGCGTCCACCCGTACAAGTGCGAGGTGTGCGGCAAAACCTTCCCGCAATACAACAATTTGAAGCACCACATGAAGAAACACGAGGCACCGTCGACCACGCTGCCGGACAAGCAGCAGCCGCCGTCAACCAACAGTAATGGGGTCAGCACGACTACCACCTCCCCGTCCTTCTCCAACATCGCCGCGGCCGCAGCGCTCGTCTCTAACAGTTGCCCTGCGGGCTTAAGGCCACCGGTTGAAACCCACGACGTTTCTGGATCAACGGTAGCCAGCTCAACCACCAGTTCCGGCTTCGAGTACAAATGCCATATCTGCAGCAAGCTGCACAAAACCTCCGACGATCTCCAGGAGCACCTCAACCAGCACAGCAAGGAACGGCCGAATCAGTGCGAGTTCTGCTCGAAGGTGTTCCCCCGGTCGTCGCACCTCATCATTCACCGGCGCCGACACACCGGCGAGCGACCGTTCAAGTGCAAATACTGCGACAAGGCGTTCGTGGACTCGCGGGCCCTGTCGGTGCACACCCGACTCCACACGGGCGAGCGGGTGAAGTGCGAGATCTGCGAGAAAACCTTCGCCAGCTCCAGTGGCCTCATCGTCCACCGGCGCATCCACACCGGGGTCCACCCGTACAAGTGCGATCACTGCGATAAATCATTCGCCCAATCCACCGCGCTCAAGTACCATCTGAAAAAGCACGATACCGCCCTTctgccgacgacgaccacctCCGACCGTGTAGGTGTTCCGCTGGCGCAGGAAATGCAACACAGCCGCACGCTGGGTGCCACGTTGCAACCACTCCAGGGATTGAGCAGTTCGGCCGGCGGGGGGAGCTGCGATCGGTTCAAGTGTCCCGTGTGCAACAAGCTGTTCCGATCATCCGAGTATCTGGTGCGCCACCGGCGAACGCACAGCGGGGAACGGCCGTACCAGTGCGAGATCTGCGGCAAGAACTTCTCCACTATGAGCTACCTAGTTATACACCGGCGGCGACACACGTCCGAGCGGCCGTACAAATGCAGCTCCTGCGAGAAGGCCTTCGTCGACTCCCGGGCTCTGCAGGAGCACGCCCGACTCCACACGGGCGACCGGGTGCGGTGCGAGATCTGCCAAAAAACGTACTCCAGCGTCAGCAATCTGATCGTGCACCGGCGTATCCACAGCGGCATCCATCCGTTCGAATGCGACATTTGCGGAAAATCTTTCGCCCAGAAAAATGCCCTCAAGTACCACCTCAAGAAGCACATTAAACCGAACTAA
Protein Sequence: MDVFDTADFNPELILSSVFLDPGLDFVANIDDLGDSIMAPDMLQHLGNSVFYAENTCTTSNSQNIEGVPSDECHQQLVQNQLHHQQQPTASQQAPNLITSRAHATVEKHTEELGYEPFGSDYSKQLPPGMPLAMVIPAAQQQQQQQPCKCEFCEYLQANRISLTGDHSFQCEFCGEGFSNQTSFNRHRCGSTDIQMYRCESCRREYGSSRALSSLGNCEQRDKCDLCNRSYEQAHTEGPGTYGSASQVVSNAIPTANFPAKTLGFSTTRIRPGEAVVTLPASVDVSLVTTPFSAVAMAASSEASTGSAGDRIVINVQSILDSPTEQHDLSSIDPFGSDSECIGDFFGAGATDASDETSSLATAPSSSTNTGAALGTPPSLGTPTLHHPESAKTYFVLGNVEQLQQRQPQQACSNNNNSNSNVQPATNSFHYLHLPQTTVPHQQQPLPPGSLQTAPTGSLLPSEHEVTSLQQYDQYDDEDYSSMSEDEAIVPIEPYAKSPNQEHAKTELPIQETIVDTSSRVAHFTGALANDLSSAKVTSLSQFLAHGLDGSQEHQQQHNPHLQHQQHQQHLLQQLDATISLTRLDDDEEGKCDSSSSLRPLSIGAAGGELQHPAGGAASNSSVERPYKCHICERSYRNQKNLKSHLKVHEGIRAYQCEICGKNFSGSSYLVIHRRRHTGERPFKCATCGKAFVDSRALSVHTRLHSGERLKCDKCEKTFSSVSALTVHNRLHTGVHPYKCEVCGKTFPQYNNLKHHMKKHEAPSTTLPDKQQPPSTNSNGVSTTTTSPSFSNIAAAAALVSNSCPAGLRPPVETHDVSGSTVASSTTSSGFEYKCHICSKLHKTSDDLQEHLNQHSKERPNQCEFCSKVFPRSSHLIIHRRRHTGERPFKCKYCDKAFVDSRALSVHTRLHTGERVKCEICEKTFASSSGLIVHRRIHTGVHPYKCDHCDKSFAQSTALKYHLKKHDTALLPTTTTSDRVGVPLAQEMQHSRTLGATLQPLQGLSSSAGGGSCDRFKCPVCNKLFRSSEYLVRHRRTHSGERPYQCEICGKNFSTMSYLVIHRRRHTSERPYKCSSCEKAFVDSRALQEHARLHTGDRVRCEICQKTYSSVSNLIVHRRIHSGIHPFECDICGKSFAQKNALKYHLKKHIKPN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -