Aplu010364.1
Basic Information
- Insect
- Anopheles plumbeus
- Gene Symbol
- bab1
- Assembly
- GCA_034621735.1
- Location
- JAOEFI010000007.1:21527339-21529950[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.8 4.8e+03 -2.6 0.1 29 37 221 229 220 236 0.79 2 3 1.1e-12 3.1e-09 36.5 0.0 1 45 469 513 469 513 0.95 3 3 0.017 47 3.9 0.8 4 20 635 650 634 650 0.93
Sequence Information
- Coding Sequence
- ATGGGTGGCAGCGAAGGACAGACCTACTGCCTGCGGTGGAACAACCACAAATCCAACCTGGTCGAGATACTAGACGCGCTGATTAAAATGGAGTGCTACGTCGACTGCACGATCTATGTCGACGACCAGGTGCAGTTCAAGGCGCACCGGGTGGTACTGGCGGCCAACTCGCCCTACTTCCAGTCGATCCTGCAAGACGTGCCGATGGACCACTGCAGTATCCTGTTCCCGGGCGTGCAGGAGTTCGAGATGCGCGCCTTGCTCGAGTACATGTACACCGGCGAGGTGAACGTGACGCAGGCGCAGATCCCGCGCATAATGAAGATCGCCGAGCAGCTGGAGGTGAAGGGACTCTACGATATGGCCGACCTAAAGGGCCGCTTCGAGGTAGAGCACCCGTTGCGCGACCCCACGACGACTTTGCTGCAGAGCAACAATAACTACAGCAACAAGGGAGAGACGGTAAGTGGTGGAGCTGGACTTACAGCCGCCTCTGCGTCCTCCTCGTACTCTCACGTACCTCCgaccagtagcagcagcagtagtcaCTATCCGCATCATccgcaccatcagcatcagtcGTCGCCAGTCATCTCGACATCTACTAATATTTCGATCGCTCAAAGTAGCAGCTCATCGCCACCGTACGCTTACAAATCGCCTTATTCGAGCCTGTACTCACGCAGTCCTGGAACCGTGGAGCGTGATCGCGAACGGGAAGAGCGTAGCCGTGATCGTTCCTCGTCCTTCTCGCACCCGGCTACTTCACCACATCGCATTCAGTCCACATCaacctcctcgtcgtcctccgtaTCGGCTCAGATTGCACTTCAAGCGCAGGCGGGATCCCATCAAGCTTCGTCGCACCAATCGACCGGCTCCTCTAGTGCGACCTCAGTCTCTGTTCAACCTTCcccgactgctgctgcggctgccgcgCTTGCTGCCAGTTGGCCGGGACTCGGACAGACACAGCTGCACAGTATGCTCAGTTCGGCGTACGACTCCAGCACTGATATGAACCCACTTAAGCGGAAGAAGCTCCAGTCCATGTCCAGCATGCTGCGCGATACACCTATTCTGCGCAACGTCCTGGCTCAGGCAAACCCGGCCGATTCGTCGCAGTCTGGCAGCAGTGTGGTCCCATCCGGCGCTGCAGTCTCGGTTGCAACGATACAGACGATTCCGGGCAACATGAAATCTGATCCCGAGCGTCCCAGCAGTCATCACTCCAATGGCAGTGGTTATAAGTCAATCAAGGAACCATCGCATTCGCCCTATGCGGATAAGTCATACGACGATGAGATGTTGGATTCGCCGCACAACTTTGGAGGAGATGCGCGCCTGGCATCGTATGTGccccatcagcagcagaaaccgGAATGGAAGCGCTACAAGCAGTACACTCGAACGGATATCCTGAACGCGATCGATTGCGTACGGAAGGGAATGAGTGCGCTACAGGCTTCGCGCAAGTTCGGCGTTCCCTCGCGCACGCTCTATGATAAGGTGAAGAAGTTAGGTATCACTACTGGTCGACCGATCAATCGGGCCCTCAAACGATCGCCCAGCTCGGGCAGTAGCCCCGCATCGTTTCCGTATGGCTTGAGTGGTGCCAGTCACATGTTCGGGCCAGGAACAGGGGCTCCCGGTGGCGCCTCCCACAGCGGAGATCACCATCAGCAATTACCTTCgcaatcgcagcagcaggatgacGAGGCGGCTGTTGCACTTGCACACCACGAAGCGAGTCGTATGATCAAGCTGGAGCATGGCAGCCACCACAGTCTTCCTCCGACGATCCCGCATCCTGCTGCGGCCCTTCTCGATCCCTCTTTTCTGCAGCAGGCTTTGGAGGCGCGCGGTGGCGACATTGCTGGACGTGAGGCGCTGCATGCTATGGCATTCGCGGCGGCAGCTCACGCGGCCGTTAATGGCATGAGCACGTCCCCGGGCACCCACGGAACCGCACGATCACCGAGCCCAAGCGTACTGATGAAATACATGCGCTCGGTTTCGATGAGTTCTCCCGAGGACGATCGTCATCACGCGGtacagcaccaacagcagcatatACGTGATCGAGTGATGGGCGAAGGACAACCACAACCGGACGGTAGGCATCACAATGGATCGGATTCGGTACCAATGGCTTACGCCATACGGGACCATCCAATGGAGCGAGATTCAATTGATGAAGCAGGAAGCGACTGTGGAGCCAGACCGCCCAGTGTCGCGGCTCCCGAGGAAGGGCGGGATGATCATGTCGAGGATCTATCGATGGGAACGAAGCGCGACTCGGAGGACCGAGGTCTCTCTGTATCCCCACCTCCGTCGCTTCGGACATCGCAGCGCTCGCGCTCACCATCACCACAGGTACAACCTCTgcccccaccaccacaaccccaGCAACAAGGTGTCATAGTGCCAGCCCCCGGAAAATTGAAGGAGGACTATAACATTTCCATCAAGCGGGAAATCATCGCCGACAGCAACGCACCGTCGGAGTCATCATAG
- Protein Sequence
- MGGSEGQTYCLRWNNHKSNLVEILDALIKMECYVDCTIYVDDQVQFKAHRVVLAANSPYFQSILQDVPMDHCSILFPGVQEFEMRALLEYMYTGEVNVTQAQIPRIMKIAEQLEVKGLYDMADLKGRFEVEHPLRDPTTTLLQSNNNYSNKGETVSGGAGLTAASASSSYSHVPPTSSSSSSHYPHHPHHQHQSSPVISTSTNISIAQSSSSSPPYAYKSPYSSLYSRSPGTVERDREREERSRDRSSSFSHPATSPHRIQSTSTSSSSSVSAQIALQAQAGSHQASSHQSTGSSSATSVSVQPSPTAAAAAALAASWPGLGQTQLHSMLSSAYDSSTDMNPLKRKKLQSMSSMLRDTPILRNVLAQANPADSSQSGSSVVPSGAAVSVATIQTIPGNMKSDPERPSSHHSNGSGYKSIKEPSHSPYADKSYDDEMLDSPHNFGGDARLASYVPHQQQKPEWKRYKQYTRTDILNAIDCVRKGMSALQASRKFGVPSRTLYDKVKKLGITTGRPINRALKRSPSSGSSPASFPYGLSGASHMFGPGTGAPGGASHSGDHHQQLPSQSQQQDDEAAVALAHHEASRMIKLEHGSHHSLPPTIPHPAAALLDPSFLQQALEARGGDIAGREALHAMAFAAAAHAAVNGMSTSPGTHGTARSPSPSVLMKYMRSVSMSSPEDDRHHAVQHQQQHIRDRVMGEGQPQPDGRHHNGSDSVPMAYAIRDHPMERDSIDEAGSDCGARPPSVAAPEEGRDDHVEDLSMGTKRDSEDRGLSVSPPPSLRTSQRSRSPSPQVQPLPPPPQPQQQGVIVPAPGKLKEDYNISIKREIIADSNAPSESS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00101774;
- 90% Identity
- iTF_00105924;
- 80% Identity
- iTF_00105924;