Basic Information

Gene Symbol
ttk
Assembly
GCA_034621735.1
Location
JAOEFI010000006.1:21328435-21350897[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.3e-17 6.2e-14 51.5 0.0 2 45 682 726 681 726 0.95

Sequence Information

Coding Sequence
ATGATGTCCGTACAGCAGTACTGTCTACGGTGGAACAACCATCAACCGAACTTCATCTCGGTCTTCTCGACGCTGCTGCACAATGAGAGTCTGGTCGATGTTACGCTGGCCGCCGAAGGACGACAGTTGCAGGCGCACAAGGTTGTCCTTTCGGCGTGCAGCTCCTACTTTCAGTCCCTGTTCACCGCCAATCCCTGCCAGCACCCGATAGTGATACTGAAGGACGTGCAGTACAACGACCTGAAGACGATGGTCGACTTCATGTACTACGGCGAGGTGAACGTGTCCACCGAGCAGCTGCCGCAGGTGCTCAAGACGGCCGAAATGCTGAAGATCAAGGGCCTGGCGGAGATGCCCGACGCTTCGGCGGTGTGCAAGGCGGACCTGAGCAAGCTCGACCCCACGGATTTGATACAGACGGGCAACGTGGTGCCGGGCACGGCGGGCGAGACGATATGGGGTAGTGCTGAatctcagcagcagcagcaacaacagcagcagcaacaacagcaagcgcaacagcagcagcaacagcagcaacagcagcagcagcagcagcagcaacaacaggcacaacatcaccagcaacaagctcagcagcagcagcagcaacaatatcatcaccaacagcaacagcagcagcagcagttgcatcAACAACCCCAGCTAAGGCGATCACCCTCCCCCACGACCAACATGCTGTCGGCCGCTCGAAGGAAACGATTAAGAAAGACCTCGACGGGTTCTGGATCCCTGTCAACCGAGcggcttcagcagcagcaacaacaggcgcaacaacaacagcagcaacaagctgcggcagcggcagcggcggctcAGCAACAGGCGGCTGCCGTagcagcggccgcagcagccgcggccgccgctcaacagcagcaacagcagcaggcggaTGAGCATGGTGCCAGTGCGGACGCGACTACGCTCAATCTGGTGCCGCATCTGCACATCCAGCAACAGGTTGACAACATATCCTACGGCACGACGGCGGGGCACGGTACCCTGGCGTTGGGAgctgccaccgctgccgcagccgcggccgcagcagcagcggcggcggcagccgcCGGCAACAACATCCGCATCATTAAGGAGAGCCCGAGCTCGGAcgtcgaccagcagcagcacgagtCCTCGCAGGAGAGCGTCGACGAGACGGGCCACCACATGCCGAGCATCATCAAAACGGAAGACCTCAGCGGAGTCACGCAGACCATCCCGATGGACAtcacgacgacgccgacggcCGTCAACATCAcgcaatcgcaatcgcaaCACACCGGTGGGCAATGGACGGTAATCGATACGAATTATTCGCGGTTTGGCATTGCGCCCTGTCAGACGAATTTAGGactacaacagcagcagcaacaccagcagcaacaacagcagcagcagcagcaacagcagcaacatcagcagcaagtgcagcagcaacaccatcaacagcagcaagccgggcagcagcagcaacagcaccagcatcagGGTGATAGTCAATCGCTGACCACTGCTGGCAATGGAACGAACAGTACGACGAATGGTAGCGGAGGAGGCACTGCGGGAGCAGCTGGTAGTGCTGGTACGGGCGGGGGAAACACCGGGAATGCCCTCACGAATGCGTCCGCGACTAACTCGAACGCAACAACGCCGCAACCGACGACGCCAGTACAAATCTATCAGCACCCCTTCTCGCCCCAGATCATCTCGGTCAATCCGAACAACATGGTCAACAGCTACCAGTcgtcaaacatttccaccccgaCGTCTCCACAGGCGGGAACCGATCAGACGGCGGCGGGGCTTGTGTACAGCACCGGAACACCAAACCAATCCCCTCTCGGGACGGCGacgaccaccacgacgacgacaggcgCCGCAGGTGCCCCCGGGAacggggcggcggtggtggccggtggcaaTGGGACAGCGGGGGGCAATGGAACCACGCCCGGTACCGGAGCGACGGGTGCGGGCACGGTGCAACCGGTCAAGCGGAAACGGTCCGTCAATCCGCAGGGCGACGAAAACTTCCTGCGAGCGCTCGAGGCGGTCCGCTTCGGCGGTATAGGTTTCTGCAAGGCGGCGCGCCTCTACGGGGTGAACAATCGGACCCTGTGGCTGGAGTACAAGAAGCGCGGCTACCCGATCAGCAGGCCGAGTATTAAAAATCGCATCAAGCTGGAACCGAACATATCGCCGCCTCCGACGGCCACCACGCCACCAGGAGACGAGAACGCCTCGTTGGAGCACTACGACACGGCTCTCTCCTCCCCTGCCCTTAATATGTcgttgcagcagcaacagcaacagcagcaacagcagcaccaagcagcgcagcagcaggtAGCGACtgcgcagcaacagcaaacgcaacagcagcagcagcagcatcaacaagctcagcagcagcaacagggcAACGACACGACGAatgccgcagcagcagcggcagcagcagcagccgtggCGGCCTCGTCCACCTCTCTCATGTGCCCGCCGCACGGGCACCCGATGGGTGTGATGGGCTTCGTCGATACGCGCCACGTCGACTTCACGACCACGGCCAGTCTGCACCCGATGTCGCGCCAGCGGTACCCGGACACGGCGACCATCAATATGAACACGGGCGCGGTCAACCTGCAGGGGCTCAACTTTAACTCCATGTAA
Protein Sequence
MMSVQQYCLRWNNHQPNFISVFSTLLHNESLVDVTLAAEGRQLQAHKVVLSACSSYFQSLFTANPCQHPIVILKDVQYNDLKTMVDFMYYGEVNVSTEQLPQVLKTAEMLKIKGLAEMPDASAVCKADLSKLDPTDLIQTGNVVPGTAGETIWGSAESQQQQQQQQQQQQQAQQQQQQQQQQQQQQQQQQAQHHQQQAQQQQQQQYHHQQQQQQQQLHQQPQLRRSPSPTTNMLSAARRKRLRKTSTGSGSLSTERLQQQQQQAQQQQQQQAAAAAAAAQQQAAAVAAAAAAAAAAQQQQQQQADEHGASADATTLNLVPHLHIQQQVDNISYGTTAGHGTLALGAATAAAAAAAAAAAAAAAGNNIRIIKESPSSDVDQQQHESSQESVDETGHHMPSIIKTEDLSGVTQTIPMDITTTPTAVNITQSQSQHTGGQWTVIDTNYSRFGIAPCQTNLGLQQQQQHQQQQQQQQQQQQQHQQQVQQQHHQQQQAGQQQQQHQHQGDSQSLTTAGNGTNSTTNGSGGGTAGAAGSAGTGGGNTGNALTNASATNSNATTPQPTTPVQIYQHPFSPQIISVNPNNMVNSYQSSNISTPTSPQAGTDQTAAGLVYSTGTPNQSPLGTATTTTTTTGAAGAPGNGAAVVAGGNGTAGGNGTTPGTGATGAGTVQPVKRKRSVNPQGDENFLRALEAVRFGGIGFCKAARLYGVNNRTLWLEYKKRGYPISRPSIKNRIKLEPNISPPPTATTPPGDENASLEHYDTALSSPALNMSLQQQQQQQQQQHQAAQQQVATAQQQQTQQQQQQHQQAQQQQQGNDTTNAAAAAAAAAAVAASSTSLMCPPHGHPMGVMGFVDTRHVDFTTTASLHPMSRQRYPDTATINMNTGAVNLQGLNFNSM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00105905;
90% Identity
iTF_00105905;
80% Identity
iTF_00105905;