Aplu000884.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Anopheles plumbeus
Gene Symbol
ct
Assembly
GCA_034621735.1
Location
JAOEFI010000003.1:890183-893931[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.29 1.4e+03 -0.5 0.0 36 53 118 135 112 136 0.81
2 3 4.9e-32 2.3e-28 98.1 0.0 3 77 374 449 372 451 0.96
3 3 9.9e-31 4.7e-27 93.9 0.0 3 76 667 741 665 744 0.96

Sequence Information

Coding Sequence
ATGCCATCCTACGGTCGGCCGGACGGTGATCTGAACGACGACCGCATCCAGCACATCCTCTCGGAGGCCTCGATGATGAAGCGAGGCGACCAACCGactccgcagcagcaggcccaccatcagcagcaaatGCGCGAGcagatgcagctgcagcagcagcagctgcagcaattGCACCTCAGCGGGCTGGACGACTGCACGCAGCACAGCGATAATGACTCCAAGTCACCGCACAGCCGCGACGTTCACTCGCCCTTCTCCAAAGACTATCACAGCGGGCGCAGTGGAAGCGCCGGGCGGTCCAAGAAgtacgacaacgacgacatGCCACAGGACAAGATCACCAAGATCTACCAGGAGGAGTTCTCCAAACTGATGCGCAGTCCGCGCGATTTTCCCAATCTTCTGTTTCCCCATTTCCTCGGCGGCGGAATGCCACCGATGGACCGGTTGCAAGACGACAACATCCGTATGGCGCTCGAGGCGTACCACCGAGAGTTGGCCAAACTGCAGCAGAACGCCAACGCAGGTCTTCCGGGCATACCCAACATCTCCAACCTTCCAAACTTCTTGGcactccagcaccagcagcatcagcagcaacagtcgcaGCAACCGCCGCAAGCGTCGTCACAGCAACCATCGAACGCTTCGCAGCAACCGCCACAGCAATCTTTGCAGCATCCTGCGACGGGATTGAACGGTAGCTCCGCGCAAGACTTATCCCTGCCGAAGGAGAAGCAGTCTTCATCTTCGAAGCTGAACGGTAGCATGTCCGACGCCGATTCGGACGCCGACATGAGCCAGAAGGACCTGGACGAGAGCATGAAGCACAGCGCATTCAGTCTGGTCAAGCCTAAGCTCTCTGAGCCATCAGGTCTCTGCACACCGACAACCACGGCCTCATCCGCGGCCCCGAGCCCCATCAGTAACAGCATCCTGCCACCCACGATAACACCAACGGATGACTTCTCCGTAGCCGCTAGTCCCCTACAGCGGATGGCGTCCATCACGAACTCGCTGATCACGCAGCCGCCAGTCACGCCACATCACACCACGCAACAGCGCCCCCTGAAAGCCATCCTGCCGCCGATTACGCAGCAACAGTTCGACCTGTACAACAATCTGAACACGGAGGACATCGTGCGGCGCGTCAAAGAGTCGCTCTCGCAGTACTCGATCAGCCAGCGGCTGTTCGGGGAGTCAGTGCTGGGCCTGTCGCAGGGTTCGGTAAGCGATCTACTGGCTCGCCCCAAGCCCTGGCACATGCTGACACAGAAAGGCCGTGAGCCGTTCATCCGCATGAAGATGTTCCTCGAGGACGAGAACGCGGTGCACAAGCTCGTCGCCAGCCAATACAAGATCGCACCGGAGAAGCTGATGCGCACGGGCAACTACAGCGGCACACCGCAAATACCGGGGATGCACCTTCAGAAATCGGGCATGCCTCCCACGATGCCGAAGATGTTGAGCGACTCCCTCACCAAGCTGCAGCAAGACCAGCAGAAGACGCTCCTGCAGCTCCAGATCTCacaaatgcagcagcaacttcCATCGGCACAAGCGGCCGCGgcgcaacaccaacaccagctggcagccgccgcagctgccgccgccgctcacCACGCCGCCCAAGTTCAGGAGGCCCAGCGCCACaacgcacagcagcagcaggcgcctccatcgcaaCCATCGCCCCTGGGAGGGGCGGGCCTGCAGAACTCTTCCTCACAGCAGCGACCACAGCAACCGTCGCCACAGACGATGCTCCTAACGCCCCCGGGCATACCGCCCCAGCATGCCATCGCCCTGCAAGGCCACCCGGGGCAGCAGGACAAGAAGTCCTCCATCATGATGCCGATCCACTCGCCCGTTCACCAGCAAGGACCGCCGGGATCCGCGGGACAGCATCCGTCGCAGCCGGGAGCCCCGAACTCCATGCGCGGTTCGCTGCACCAGCACATCTCCCCGACGGTGTACGAAATGGCCGCCTTGACGCAGGACCTCGATACGCAGGTCATCACGACGAAGATCAAGGAGGCCCTGCTGGCAAACAACATCGGCCAGAAGATCTTCGGGGAAGCCGTGCTGGGCCTCTCGCAGGGGTCCGTGTCGGAACTGctttcgaaaccgaaaccctGGCACATGCTGAGCATCAAGGGCCGGGAACCGTTCATCCGCATGCAGCTCTGGCTGAGCGACGCCAACAACGTCGAGCGGCTACAGGCCCTCAAGAACGAACGGCGAGAAGCAAGCAAACGACGTCGATCGACCGGTCCCGGAGGGCAGGACAACAGCTCCGACACATCCAGCAACGACACCTCCGAGTTCTACCATTCCAACTCACCCGGCCCGGGGTCGGTGGGGTCGGCTACCGCCCCTCCGAACAAGAAGCAGCGCGTGCTGTTCTCCGAAGAGCAGAAGGAAGCCCTCCGGCTCGCGTTCGCTCTCGACCCGTACCCCAACGTGCAGACAATCGAATTCCTGGCGAGTGAGCTGGGCCTCTCCACGCGTACCATCACGAACTGGTTCCACAACCACCGTATGCGGTTGAAACAGCAGGTGCCCCACGGCCAGCCGTCGGAGCCGATTCCGTCGCGAGAAAATCAAACCGGCGCCCCATTCGACCCGGTACAGTTCCGGGTCCTGCTCGGCCAGCGACTGATGGAGATCCAGAAGGAGCGTCTCGGTCTCAGCGGGATGCCGCTGCCCTATCCGCCTTACTTTGCCGCTGGCGCTCCGACGGCCAACCTGGCGGCCCTGATCGGCCGAGGATTCATGCCGGGCAGCGAAGCCGATCTGGCCGCCCTCAACAAGGCCGTCAGTGAGCAGATGAGCGGGCTCGACCTCTCGATGCAGTCCTCGCTGAAACGGGAAGGCGATGATGACTACGAGGAGGAGGCCGAGAACGAAGAGGAAGCGGGTAGTGGCCACATGAGCGACTCGGAGTCTATggacggcggcagcagcaggcgggacggcgatgacgacgacctCACCAAGACGTCCCTGTCGTCGTTGGCGAGTCTGCAGGCGATGTCGCGAATAAGCCGCCGAAAGCCGGCCGCCCCCCAATGGGTCAATCCGGAATGGCAGGACCCGGACAAGAAGACGACGACCGCATCTACTAACGCGGTGGGCTCCAACATTCTTCCCCCGGGCGTCGGCAGAAAGgacgccgcggccgccgcctcCGACGCCATCATTAACGGGGTGTGCGTGTTGCAGCCACCAGAGAGTGTCCCGTCGGTGCAGCAACGGTTCGCTGCAGCaatggcggcagcagcggcggccgcagtTGCCGCGGCGGCCGGGGCAGGAACCACCGACCCTTCTCAGGACCAGGACGTCGATCCGACGAGTGAcgccgacaacgacgacgaggacgacgccAAATCGATCCACTCAAGGCACTCCGTCTACGGCGGGTCGGACGGCAGGATGGACGATGGCCGACTTCGGACCACTTCCCTCGGGGAGTCGGAATCGGACGCCCCGACGGGGAACACCATGCGGCCGGACAGTGCGACGGGCAGAACATCGGAAGCAATGAGTCTGGACAGCAACGGGAATCGGTCGGCGGCCGCTAGTCCTATCTCGGCTTCGGTGACCGTCAAGAAGGAGATCCTCGAGGACAACATCGGCGACCGGTGGAACTCGTACTGA
Protein Sequence
MPSYGRPDGDLNDDRIQHILSEASMMKRGDQPTPQQQAHHQQQMREQMQLQQQQLQQLHLSGLDDCTQHSDNDSKSPHSRDVHSPFSKDYHSGRSGSAGRSKKYDNDDMPQDKITKIYQEEFSKLMRSPRDFPNLLFPHFLGGGMPPMDRLQDDNIRMALEAYHRELAKLQQNANAGLPGIPNISNLPNFLALQHQQHQQQQSQQPPQASSQQPSNASQQPPQQSLQHPATGLNGSSAQDLSLPKEKQSSSSKLNGSMSDADSDADMSQKDLDESMKHSAFSLVKPKLSEPSGLCTPTTTASSAAPSPISNSILPPTITPTDDFSVAASPLQRMASITNSLITQPPVTPHHTTQQRPLKAILPPITQQQFDLYNNLNTEDIVRRVKESLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGNYSGTPQIPGMHLQKSGMPPTMPKMLSDSLTKLQQDQQKTLLQLQISQMQQQLPSAQAAAAQHQHQLAAAAAAAAAHHAAQVQEAQRHNAQQQQAPPSQPSPLGGAGLQNSSSQQRPQQPSPQTMLLTPPGIPPQHAIALQGHPGQQDKKSSIMMPIHSPVHQQGPPGSAGQHPSQPGAPNSMRGSLHQHISPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQALKNERREASKRRRSTGPGGQDNSSDTSSNDTSEFYHSNSPGPGSVGSATAPPNKKQRVLFSEEQKEALRLAFALDPYPNVQTIEFLASELGLSTRTITNWFHNHRMRLKQQVPHGQPSEPIPSRENQTGAPFDPVQFRVLLGQRLMEIQKERLGLSGMPLPYPPYFAAGAPTANLAALIGRGFMPGSEADLAALNKAVSEQMSGLDLSMQSSLKREGDDDYEEEAENEEEAGSGHMSDSESMDGGSSRRDGDDDDLTKTSLSSLASLQAMSRISRRKPAAPQWVNPEWQDPDKKTTTASTNAVGSNILPPGVGRKDAAAAASDAIINGVCVLQPPESVPSVQQRFAAAMAAAAAAAVAAAAGAGTTDPSQDQDVDPTSDADNDDEDDAKSIHSRHSVYGGSDGRMDDGRLRTTSLGESESDAPTGNTMRPDSATGRTSEAMSLDSNGNRSAAASPISASVTVKKEILEDNIGDRWNSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00099478;
90% Identity
iTF_00109026;
80% Identity
iTF_00105733;