Basic Information

Insect: Anopheles minimus
Gene Symbol: -
Assembly: GCA_000349025.1
Location: KB664054.1:4840634-4844321[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.061 3.5 7.8 1.5 6 23 254 271 254 271 0.97

2 14 0.71 40 4.5 0.1 6 23 282 300 277 300 0.85

3 14 0.00092 0.052 13.6 3.0 1 23 308 330 308 330 0.93

4 14 0.00041 0.023 14.7 2.4 2 23 339 360 338 361 0.94

5 14 0.34 19 5.5 1.1 2 23 415 437 414 437 0.91

6 14 5.9 3.3e+02 1.6 2.1 6 23 447 464 442 464 0.89

7 14 0.00038 0.021 14.8 0.6 1 19 470 488 470 493 0.94

8 14 0.036 2 8.6 2.9 1 23 501 523 501 523 0.96

9 14 0.075 4.3 7.6 5.0 3 23 533 554 531 554 0.96

10 14 0.0012 0.067 13.2 0.1 2 23 561 582 560 582 0.96

11 14 0.94 53 4.1 6.7 1 23 592 615 592 615 0.96

12 14 0.00045 0.025 14.6 1.9 2 23 622 643 621 644 0.94

13 14 0.00017 0.0095 15.9 0.9 1 23 650 672 650 672 0.97

14 14 0.021 1.2 9.3 1.4 1 23 678 701 678 701 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.061	3.5	7.8	1.5	6	23	254	271	254	271	0.97
2	14	0.71	40	4.5	0.1	6	23	282	300	277	300	0.85
3	14	0.00092	0.052	13.6	3.0	1	23	308	330	308	330	0.93
4	14	0.00041	0.023	14.7	2.4	2	23	339	360	338	361	0.94
5	14	0.34	19	5.5	1.1	2	23	415	437	414	437	0.91
6	14	5.9	3.3e+02	1.6	2.1	6	23	447	464	442	464	0.89
7	14	0.00038	0.021	14.8	0.6	1	19	470	488	470	493	0.94
8	14	0.036	2	8.6	2.9	1	23	501	523	501	523	0.96
9	14	0.075	4.3	7.6	5.0	3	23	533	554	531	554	0.96
10	14	0.0012	0.067	13.2	0.1	2	23	561	582	560	582	0.96
11	14	0.94	53	4.1	6.7	1	23	592	615	592	615	0.96
12	14	0.00045	0.025	14.6	1.9	2	23	622	643	621	644	0.94
13	14	0.00017	0.0095	15.9	0.9	1	23	650	672	650	672	0.97
14	14	0.021	1.2	9.3	1.4	1	23	678	701	678	701	0.91

Sequence Information

Coding Sequence: ATGGAAGTTAAATCCGACCAGCCGGTTTGTGTTGAGCTTTGTTTACTGTGTCAGGTAAACAGCAGCGATCGTCATTGGCTAACCGAGCGGATAAATATCAGCAATGGATCGATGACTGATGTTATATGCAAACATTTCTGGCTGTCCGAATCCACTTGCAAAGGCCGATACATCTGCGCTACGTGCTGGGACTTAACATTCTCCTTTCATCAATTTTACGTTGAGATAGAACGGTTGCACTCGCTTAACCCCAACGACACGATTAAGCAAGAGGAAAATTACAAAGAACGAAGGCAATCCTGCTCAACAACCGAGCAACTGGTATGGGTGAATGATGAAAACACTTTGTTAACAAGTGCGAATGAAGTATACGTGAAAGAAGACTATTCGGACAGCGAAGCTGAATCAACCAACGGAGGTCAAATTGATGAGATTGTTCAAGGTGAAATTTCGGACAATGATTCAAATATTCCCCTATCATCGttcaaaaaggaaagcaaatcgGATTGCCACAAAGCCTCAGCCGTTCAAAACGCTTCATGGCAAAGCAACAGTCTGGAAAGACCTTCTCCTTTCCCCGGTGTAGGATTATCGTTGTGCCGAATTAATGGTAGAACGCTCGAGCTTATATGTCACGATTGTTTCCGGCAAGCGAGTGACACAAAACCGTCGGCAAATGCGACCGAAGCACGCTTTACCTTCGCCGCCTTGCTGAAACACTATCGGAAAGAGCACAACAAGACGGGCTATGCGGTGTGCTGCAACCGGAAGTACACGCGCAGAAGATCGCTAAAGATGCATCTCGTGTCGCACGGTAGAAAGGTCGTGTATCGTTGCATACCCTGTGGTATAATGTTTCGCAAGCAAGAATCTTTAGACGAGCACAACCTGCTCATCCATACGTCGGAGGAGGAAAAGCAGTTCAAATGTGATCAGTGCGAGAAATCGTTCGCGACAGAGCATCTGCTACATTCTCACGGCACGTGGCATGAAAACATTGCGAAAAAGAATATTAAGTGTAAAATGTGTAACCTTTTCTTTGCCAGTAAACCATCGCTGAAAAAGCATCGCGCACTGCATCATCCATCAGCGGAGAGCACTGAGACGCACTTGGGTTCCGGCAATAGCAATAGTGGGCCCGTACCCACCGAAGAGCAACTGGTTACTTCGCAATATCGCACACGCATTTCGGCGGCAGAAATCAACGAACAGGACGAACTGATTAAACGTCACTGTTTGTTAAATTGTAGCAAATGTGATTATTTTGCGGAGAGCTTCACACAACTCAAGCAACACGTGATTCATGCGCACGGCGTACGAAGTTGCGATGTCATGTGCTGCGATCGTACGTACAGCAAACGGCAGTCACTGTACGAACATTGCTTGGTGCATGAAAATCCCAACTGCTTCCGTTGCGAGGTGTGTGGCAACAGCTACTCCAGCAGCCGCAGTTTGCAAAACCACAAATGGCGCATACATACGCCGGCCGCCGAACGACCGTTTTGCTGCGATGTTTGCGGCGACACGTTTGTGAAGGATTATCTGCTGAAGCAGCATCTGATACATCACTTGGCAAAGCATAAAAAGCTGAACCACTGCAACGTGTGCGAACGTTCGTTTACGACGGCGACGGTGCTCAAGTGCCACCAGCAGACATTTCACGGCGGTGGATTCAACTGGATCTGTGATATCTGTGCGAAAGGGTTCAACAGTCGTCCACTGTTTGAAAACCATCGTTTGACACATTCGATCGAGGGCAAATCGCAGCTAAAACATCAATGCGAACAGTGCAACAAATGGTTGCGCAATAAGAAATCATACCAGCAGCATCGCATACGCTGCCACAGTACCGATGGACCGGTGACGTGTAAATTCTGCGGCAAGGAATCAGTCAATGCGAGCGCATTGAAGTCCCACATACATCTGCATCACGTATCGAGGCCCGAGTATCCCTGCacgttttgcaacaaaagctTCAAGACGGCACTGCGCTTACGGGAGCATGAAGCGACACATACCGGCACGATACTGTACCGGTGCCCCTGGTGTCCGCGTACCTTTGCCTGTGGGTCGAACATGTACAAACACAAGAAGGCAGGCCATCCTCAGGAGTGGGCCGCTTCGGTAAAGAAACGGTTTGGCGAGCGATGA
Protein Sequence: MEVKSDQPVCVELCLLCQVNSSDRHWLTERINISNGSMTDVICKHFWLSESTCKGRYICATCWDLTFSFHQFYVEIERLHSLNPNDTIKQEENYKERRQSCSTTEQLVWVNDENTLLTSANEVYVKEDYSDSEAESTNGGQIDEIVQGEISDNDSNIPLSSFKKESKSDCHKASAVQNASWQSNSLERPSPFPGVGLSLCRINGRTLELICHDCFRQASDTKPSANATEARFTFAALLKHYRKEHNKTGYAVCCNRKYTRRRSLKMHLVSHGRKVVYRCIPCGIMFRKQESLDEHNLLIHTSEEEKQFKCDQCEKSFATEHLLHSHGTWHENIAKKNIKCKMCNLFFASKPSLKKHRALHHPSAESTETHLGSGNSNSGPVPTEEQLVTSQYRTRISAAEINEQDELIKRHCLLNCSKCDYFAESFTQLKQHVIHAHGVRSCDVMCCDRTYSKRQSLYEHCLVHENPNCFRCEVCGNSYSSSRSLQNHKWRIHTPAAERPFCCDVCGDTFVKDYLLKQHLIHHLAKHKKLNHCNVCERSFTTATVLKCHQQTFHGGGFNWICDICAKGFNSRPLFENHRLTHSIEGKSQLKHQCEQCNKWLRNKKSYQQHRIRCHSTDGPVTCKFCGKESVNASALKSHIHLHHVSRPEYPCTFCNKSFKTALRLREHEATHTGTILYRCPWCPRTFACGSNMYKHKKAGHPQEWAASVKKRFGER

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00098078;
90% Identity: -
80% Identity: -