Basic Information

Insect: Anopheles minimus
Gene Symbol: -
Assembly: GCA_000349025.1
Location: KB664277.1:2832604-2835961[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 6.6 3.7e+02 1.4 1.5 2 23 250 272 250 272 0.93

2 15 0.01 0.58 10.3 0.2 2 21 282 301 281 302 0.94

3 15 0.15 8.3 6.6 1.5 1 21 309 329 309 330 0.94

4 15 0.34 19 5.5 3.6 2 23 448 470 447 470 0.96

5 15 0.35 20 5.5 0.5 3 20 482 499 481 501 0.93

6 15 0.016 0.89 9.7 2.7 1 21 508 528 508 533 0.94

7 15 0.26 15 5.8 1.0 3 23 608 629 607 629 0.91

8 15 0.00067 0.038 14.0 1.5 1 22 672 693 672 697 0.94

9 15 0.084 4.7 7.4 2.3 2 23 766 790 765 790 0.85

10 15 0.00036 0.02 14.9 0.2 1 23 834 857 834 857 0.93

11 15 2.9e-05 0.0016 18.3 0.5 1 23 864 886 864 886 0.98

12 15 1.1e-05 0.00062 19.6 1.1 1 23 892 915 892 915 0.97

13 15 9.7e-05 0.0055 16.6 0.6 1 23 921 943 921 943 0.98

14 15 0.22 13 6.1 2.2 1 23 949 972 949 972 0.91

15 15 4.6e-05 0.0026 17.7 1.3 1 23 978 1000 978 1000 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	6.6	3.7e+02	1.4	1.5	2	23	250	272	250	272	0.93
2	15	0.01	0.58	10.3	0.2	2	21	282	301	281	302	0.94
3	15	0.15	8.3	6.6	1.5	1	21	309	329	309	330	0.94
4	15	0.34	19	5.5	3.6	2	23	448	470	447	470	0.96
5	15	0.35	20	5.5	0.5	3	20	482	499	481	501	0.93
6	15	0.016	0.89	9.7	2.7	1	21	508	528	508	533	0.94
7	15	0.26	15	5.8	1.0	3	23	608	629	607	629	0.91
8	15	0.00067	0.038	14.0	1.5	1	22	672	693	672	697	0.94
9	15	0.084	4.7	7.4	2.3	2	23	766	790	765	790	0.85
10	15	0.00036	0.02	14.9	0.2	1	23	834	857	834	857	0.93
11	15	2.9e-05	0.0016	18.3	0.5	1	23	864	886	864	886	0.98
12	15	1.1e-05	0.00062	19.6	1.1	1	23	892	915	892	915	0.97
13	15	9.7e-05	0.0055	16.6	0.6	1	23	921	943	921	943	0.98
14	15	0.22	13	6.1	2.2	1	23	949	972	949	972	0.91
15	15	4.6e-05	0.0026	17.7	1.3	1	23	978	1000	978	1000	0.99

Sequence Information

Coding Sequence: ATGAGGCGTTTATCGAAACGTAGAAAAATTACTAAAGCGGAAAACGATGTTGCATCAACTCCGAACCACGATGACCAAAGCTGCTGCTCGAGGTGCTGCATCTGTTCCATGCAGCCGAAAGGGGAATTGCTTGAACTTTCTACAATTGTGGAAAACAGCAACCATTTAACAATTGCTGCTATAGTGGAACAAGTGGCTGGAATCAAGGTAAAACATGTCCAGAAAAGCATTTGCAGTGGTTGCTGGTCGAAAATACAAGCAGCCTACTCAATACAAAAGGAAATCCGAGGGTCAAAATACATAGAACAACCGGACGATTATGAGAGTGACGAAAAAGACGTAGAGCATGCCAATATCTCCATCAAAGAGGAATCCAACATTAAAGACTCCGATTGTCCCAGTGAAGAACAACGCTTGGAGCATCTGGAAGTTGTATTCAAACAAGATGTCGATGACAGGGACGGCCATTTGGACGAGCCAGAAAAACAGGAATGTGAATACGTGATCGAATATCTCGAGGATAGTTTGCAGGAGAATGATGAAGACGAACGAACTGTCAAAGAGGATCAACAGCtagcgaatgaaaatgatttgaatattgtGATAGAAATATCTGCCGCCCAGCTGGACGAGGATCTCCAAGCGGATCGCGGTAAAGTAACGCGCTGGTTTAAAATGCCCAACACCACAACGATCGTTAGTGATGAACAGCACGATCAGTACCGCGTACTTGAGGTGTCAGGCGAACGTTGCTGTGGCTGCAGTTTCGTTGCTCAAACGCGCAAGGAACTGTTGCAGCACTCGGAAACAGTACATTGCGTTGAAATTAATGACCATGGTGATTATTGTCcgatttgtttcttcaagTTCTCAACCGACCAACAGCTTGATCGACACATCCAAGAATTTAAGCTGAACAAAATGTTCGTCTGCCTGCGCTGTAACCATTTCTTTAACCTGCGTGCCCAATTATTTGACCATCTGCAGAAATGCAGAGAAGTGGAAGATGGCGATGACATATCGCCGGCAGAGAGCGACGACGCGGAAAACAATACCGTAACCATCGAACCCATCcaggaggaagatgatgagTATGGAGAGTATTACTTGCAAATGGGAGAGGACATAGTGCACCCGCACGACGAACCGTACACGAACGGTCGTCTACAAAACGGGAAGGACCCACGTGTTACGCACCGCTACAAAACGCTTTTCGAGGAGATACTGTCTGACGAAACGTTATCTAGCCCACTAACCGAAACCGAACTGAATGTGCAGGACACGCAAATTGCAGGCCAGCATGTTTTTGAAACGTTCAAGTATATTCGGCTGCGGGGCTTGAGATGTTGCGGATGTTCTTATACCTGTTATTCGAGTGCACTGTTGGTAGAGCACAGTAAAACGAGCCACCCGATGGATGGTGACGCTGTCGCCGACCGATCGTGCAGATTGTGTTGGGCAAAGTTCCCAAACGAGACCGAGCTTGTGAGACATTGGTGCTTTTTCACCACTAAACAGCTGTTTTTCTGCACGGTGTGCAGCGAAACGTTTCTGAACAAGGAAAGCTTGCGTCAACATCAGCGTCACAACGAACGACACCGGCAGCAGGAGAGCCTCCAGTTCCAGCAGGCGGGAATCGAAATAGACGACACTGAAGCGTTTGTCGAAATCGACCAACCGGCTGTTGCCGACGAGCTGGGTAAGCTCTTGGCGGAAAAGGGCGCTTACCGAACAAAAGTAATACCGATGCCAGAAGAACGGTTCATTAGGAGCAAACAAGAATACAACAACTACAGCATTCTCACCGTGAAGGGTGAATATTGCTGTGGATGTGCCAAATTCTTCGACACAATCGAAGAGCTACGGCTACATTCCAAGGCCGAGCACTATTTGCCACTAAGCTCCCATGCACGTGTTTTCGGTCATCAGTGCGAATTCTGCTACGCTTTGTTCGATTTCGAACGGGGACTGTTCATGCACAATGCTATCCGACGCACAAAGATAAAGctgctgtttgtgtgcaaGCTTTGCGGGATGCTCTTCTCGAAGAAGTTTTGTCTAGCGCGACACATGCAATCAGCACCGAACCATCTATCGAGATTAATTGTTGATGccaatgcaaatgcaaatcgcTCGGAAGAAGGTGACGAGCGAGAAGAAGATTCGGAAGCATCCGGTAGCGTGCCTACCACCGGATCGCTTGTTGAATCGGATCCACGTGTTTTGGAAGCGTTGCAATTGCACCGATCGATTGAAGAGACGGGATTGGAGAAGGTGGGCCACCTCGTGTGGTATCACTGCTGCTTCACAAAGTGCACCGAAACGTTCACGAACGAAGAGGCGTTGCTGGAACATGCACAGGAGGAACATAATGGGCAACGGCGGGAAAATACACTCGAACGTAAACAGGACACTAATGTGTGTCCCGCCTGTTGCAAACCGTTTCAAACCATTGCCAAATTGATGTGGCATCGAGTGAAACGGTTCGTGCCCCGGAAATACCCCTGCAAACAGTGTGAAGAGACGTTTAATAATTGGATAAAGCTAAAGATGCATGTGGAGCTGGAGCACAGCGAAACACCACCATGCTTCCCTTGTCCACAGTGTGACAAAACGTTCATAATACGGTCCAGAATGAAGGCTCACCTAAAGACACACAGCGCCCGGAAAGATCACACGTGCGATGTTTGCGGCAGTGCGTTTGTTAATAAGGGACTGCTGAAGCGTCATCGACGATCACTTCACTCTACCGATTTGCTGTTTGAATGCAAGCTTTGCTCGAAGAAATTTGCGGTGGTGGAAAAGCTCAAAATTCATCAACGGGTTCATACGGGGGAGCGACCGTTCGAGTGTTCATTCTGCCCCCGTACGTTCCTACACTTTTCGGACCGGAAACGGCATGAAATGGCCATCCATACAGGGGAGAGACCGTATAAGTGTAAACTCTGTTCGGCATCGTACATTCGCAACAGGGAATTGAATTTGCAcatgcaaaaacacaaattagaCGGTCAAGGGAAAAAGTTCAGTAAGCAATAG
Protein Sequence: MRRLSKRRKITKAENDVASTPNHDDQSCCSRCCICSMQPKGELLELSTIVENSNHLTIAAIVEQVAGIKVKHVQKSICSGCWSKIQAAYSIQKEIRGSKYIEQPDDYESDEKDVEHANISIKEESNIKDSDCPSEEQRLEHLEVVFKQDVDDRDGHLDEPEKQECEYVIEYLEDSLQENDEDERTVKEDQQLANENDLNIVIEISAAQLDEDLQADRGKVTRWFKMPNTTTIVSDEQHDQYRVLEVSGERCCGCSFVAQTRKELLQHSETVHCVEINDHGDYCPICFFKFSTDQQLDRHIQEFKLNKMFVCLRCNHFFNLRAQLFDHLQKCREVEDGDDISPAESDDAENNTVTIEPIQEEDDEYGEYYLQMGEDIVHPHDEPYTNGRLQNGKDPRVTHRYKTLFEEILSDETLSSPLTETELNVQDTQIAGQHVFETFKYIRLRGLRCCGCSYTCYSSALLVEHSKTSHPMDGDAVADRSCRLCWAKFPNETELVRHWCFFTTKQLFFCTVCSETFLNKESLRQHQRHNERHRQQESLQFQQAGIEIDDTEAFVEIDQPAVADELGKLLAEKGAYRTKVIPMPEERFIRSKQEYNNYSILTVKGEYCCGCAKFFDTIEELRLHSKAEHYLPLSSHARVFGHQCEFCYALFDFERGLFMHNAIRRTKIKLLFVCKLCGMLFSKKFCLARHMQSAPNHLSRLIVDANANANRSEEGDEREEDSEASGSVPTTGSLVESDPRVLEALQLHRSIEETGLEKVGHLVWYHCCFTKCTETFTNEEALLEHAQEEHNGQRRENTLERKQDTNVCPACCKPFQTIAKLMWHRVKRFVPRKYPCKQCEETFNNWIKLKMHVELEHSETPPCFPCPQCDKTFIIRSRMKAHLKTHSARKDHTCDVCGSAFVNKGLLKRHRRSLHSTDLLFECKLCSKKFAVVEKLKIHQRVHTGERPFECSFCPRTFLHFSDRKRHEMAIHTGERPYKCKLCSASYIRNRELNLHMQKHKLDGQGKKFSKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -