Basic Information

Insect: Anopheles minimus
Gene Symbol: -
Assembly: GCA_000349025.1
Location: KB663610.1:3483124-3484830[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 3.3 1.9e+02 2.4 3.4 2 23 153 175 152 175 0.94

2 12 5.8 3.3e+02 1.6 0.4 2 23 183 204 182 204 0.91

3 12 0.12 6.6 7.0 0.3 3 21 210 228 208 229 0.93

4 12 0.0071 0.4 10.8 0.8 1 19 233 251 233 253 0.96

5 12 0.00092 0.052 13.6 2.1 2 23 282 304 282 304 0.96

6 12 0.11 6.2 7.0 2.0 1 23 312 334 312 334 0.94

7 12 0.00028 0.016 15.2 0.4 2 23 356 378 356 378 0.95

8 12 6.6e-05 0.0037 17.2 1.1 1 21 386 406 386 409 0.90

9 12 9.7e-05 0.0055 16.7 1.1 1 23 416 438 416 438 0.97

10 12 0.0026 0.14 12.2 1.8 1 23 444 467 444 467 0.97

11 12 6.5e-07 3.7e-05 23.5 2.4 1 23 473 495 473 495 0.98

12 12 6e-05 0.0034 17.3 4.2 1 23 501 524 501 524 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	3.3	1.9e+02	2.4	3.4	2	23	153	175	152	175	0.94
2	12	5.8	3.3e+02	1.6	0.4	2	23	183	204	182	204	0.91
3	12	0.12	6.6	7.0	0.3	3	21	210	228	208	229	0.93
4	12	0.0071	0.4	10.8	0.8	1	19	233	251	233	253	0.96
5	12	0.00092	0.052	13.6	2.1	2	23	282	304	282	304	0.96
6	12	0.11	6.2	7.0	2.0	1	23	312	334	312	334	0.94
7	12	0.00028	0.016	15.2	0.4	2	23	356	378	356	378	0.95
8	12	6.6e-05	0.0037	17.2	1.1	1	21	386	406	386	409	0.90
9	12	9.7e-05	0.0055	16.7	1.1	1	23	416	438	416	438	0.97
10	12	0.0026	0.14	12.2	1.8	1	23	444	467	444	467	0.97
11	12	6.5e-07	3.7e-05	23.5	2.4	1	23	473	495	473	495	0.98
12	12	6e-05	0.0034	17.3	4.2	1	23	501	524	501	524	0.97

Sequence Information

Coding Sequence: ATGGCCACAGAGCTGAGCAATACCGTGTGCCGTTTCTGCTTAACGCAGACTAATTCCGCTAGATGTTTTTTCGAATTGTTCAATTCCGAAGAAGAATGTGACCATCTACAAACACTGCTAGGGACGGAGATGGTACCTTCCGATGAGTATACAAATGTGTGTCCCGAGTGTGAAACGAACATCAGCATTGTCTTCAGCATTATGACCGAGATTCGAAGAGCAAACAGgattttttgtacacttttgcGaCAACAACAGGATGCAAAGCAGCTAGAAACAGTATATCGTGAATCAAGTAGCCATACCTCACACGGGACTGATGTATTGCACGTAGTTGCCAAGGATGAGCAATACGAAATGCAAGCAGAGAGACTCGTATCCGACGACGAGGAATGTTTGTACGAATGCAACAACGAATCctacgaaacaaacgaaaaaatccACGAACAAGAactgaaatgtttcatttgtaaaTCCTTCTCCGGAACGCATCCAGACTTACAGCAACATCTTCATTCATCGCATAAGGACGTTGTTGTACCAAAGCAATGCCCGATGTGTTGCATAAAGTTGGCCAGTATTTCCGAATGGAACTATCACTTGCTCATTCATCAATGCCTGTTCGGATGTTTGTACTGTGAAAAGATATTCCAATCACAACCAGATTTGGATTTGCATCACAAAGAGTGTACTGGATATCGATGCACCGGTTGCAGTCAGAGCTTTGCCTTCATCCATGAATTGTTGAAACATAATTCCTGTGGGACGAGTGATGAGGAACGCATCTACAAGATCAGCCATTTGTTAAACGCCGTTGGACGTCCCGAACCAAACGAACATCGGAAGTGTTCAATTTGTGGTGAACATTTTGCAGAACATGAGGATTTATGTGAACACATAGCAAAGATCCATGCAGAGCTGGGAATGAAATTCCATTGCTGTGATCTGTGTCCCAAACAATTCATCTCTCTCGACGTAGCTCGCCAACACCGAGCCTCGCATAACACGGAAAATACCATCCAGAATATACTCAACCCTCCAAAACGTCTACCGCATGGaccaaatgaatgtttaatctGCGGGACCAGATTCAAATTCAACCGCGACCTGCTTCAACATCTAGCGAAGGAGCACGCCGACGTGTCCGTGACGCTGTTTCAATGTGCAATGTGTGATAAAAAGTTTACTACCGAAGCAAAGCTCGAGAAACACAACTACAATATGCACCAAGGCCGACAGCCGgaatatttttgttcgttctGTGGGCGCTCGTTTAACAAACGGATCGCGCTGCAGGATCACGAAAGCACTCACCGGGGCAGGAAGATATATCACTGTGAGGTTTGCATTCGTGACTTTACGTACAAAAGCTCCTACGACCGGCACATGCAGGTTGTGCACAGTGACACCAAGAACTTCACCTGCGAGTATTGCCGTAAAAGCTTCAAGCGAAAACCAACGCTAACGGTGCATTTACGATTGCATACAGGTGAGAAACCGTATCAGTGTGAACTTTGTAAGCGTCAATTTACGGATCCTAGCTCGTTTCATAAGCATAAAAATAGGGAACATGGACGATAG
Protein Sequence: MATELSNTVCRFCLTQTNSARCFFELFNSEEECDHLQTLLGTEMVPSDEYTNVCPECETNISIVFSIMTEIRRANRIFCTLLRQQQDAKQLETVYRESSSHTSHGTDVLHVVAKDEQYEMQAERLVSDDEECLYECNNESYETNEKIHEQELKCFICKSFSGTHPDLQQHLHSSHKDVVVPKQCPMCCIKLASISEWNYHLLIHQCLFGCLYCEKIFQSQPDLDLHHKECTGYRCTGCSQSFAFIHELLKHNSCGTSDEERIYKISHLLNAVGRPEPNEHRKCSICGEHFAEHEDLCEHIAKIHAELGMKFHCCDLCPKQFISLDVARQHRASHNTENTIQNILNPPKRLPHGPNECLICGTRFKFNRDLLQHLAKEHADVSVTLFQCAMCDKKFTTEAKLEKHNYNMHQGRQPEYFCSFCGRSFNKRIALQDHESTHRGRKIYHCEVCIRDFTYKSSYDRHMQVVHSDTKNFTCEYCRKSFKRKPTLTVHLRLHTGEKPYQCELCKRQFTDPSSFHKHKNREHGR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -