Amin012711.1
Basic Information
- Insect
- Anopheles minimus
- Gene Symbol
- -
- Assembly
- GCA_000349025.1
- Location
- KB663655.1:233982-242482[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.0078 0.44 10.7 3.7 1 23 359 381 359 381 0.95 2 15 8.6 4.9e+02 1.1 0.1 3 8 385 390 384 407 0.87 3 15 9.5e-05 0.0053 16.7 2.4 1 23 412 434 412 434 0.95 4 15 1.3e-05 0.00072 19.4 1.3 1 23 452 476 452 476 0.92 5 15 0.0073 0.41 10.7 1.4 2 23 482 504 481 505 0.94 6 15 0.00039 0.022 14.8 0.2 1 23 530 553 530 553 0.98 7 15 0.013 0.75 9.9 3.2 1 20 560 579 560 582 0.94 8 15 2e-05 0.0011 18.8 4.1 1 23 588 613 588 614 0.97 9 15 0.38 21 5.3 0.9 1 23 881 904 881 904 0.94 10 15 0.011 0.59 10.3 0.2 2 23 922 945 921 945 0.90 11 15 0.47 27 5.1 0.6 3 23 952 973 950 973 0.95 12 15 0.0036 0.21 11.7 0.4 1 23 979 1001 979 1001 0.97 13 15 0.12 6.8 6.9 0.2 3 23 1011 1032 1009 1032 0.95 14 15 0.012 0.65 10.1 3.7 1 20 1038 1057 1038 1060 0.95 15 15 0.00039 0.022 14.7 0.1 1 23 1066 1091 1066 1091 0.95
Sequence Information
- Coding Sequence
- ATGGAAGTGAAAATGCAGCATCGGACACGGGCACACATGTTCCAGATACAGGTCAAAGCGTTGATCAAGACGCTGAAATGTTTGCAGTCAGACGATAAATACCAGGCGCTACTGTTTCTTATCTCGGCCATCAAGTTGTACATCAAGTTCCTGTACAACGATTGCCAGGAACGGCTCTGCAAGCCAGCAATACTCAAAGAGTTGAACAATATAGAAAATGTGATTGTGGTGAACCTGCTCAAATCACGTAGCGCGCCTCCCTCAGGCTCATCCTTGTCAGTAGCCACTGGCCACACGACCGTTTCATCGTACGGGGATGACATTGTGGGCAAATCCTGCCTCGACATTGACACCAGCACAAGTGTACGCTGTACGGACATATCGCTCGGTAGCGatgggttgttgttgatgcacCCGCACCGAACCCATTGTTCCCCTCTCGCCCCCTGGGACCTTCGGGGGAAGCTTCTGCGGGGCAATCTCTTCGATGGTCTGCCACTGACCGGCAGCGTGGCGCTAGGGCCGGATTATACTAGTAGAGGTGGTTCGTTGTTGAAAACGGGCCAACGGGCGACTAGTACGAATCGATGGTTGGGAAATGTGCGAATGAATCGTGCGCTGGTTCGTATGATCGCAAATCACGATTTTAAGCTGTTGTTCAACATGTTCGAACAAAACATCTTCCCCGCATGGAAAATCtacaaaaacgaacgaatatTTGTTCGGAAACGGCCCGCCCTAACTACGGTAACGGTGCGTACCTCGCTTCCCGCCATTTGTTACGGTAGCGGATCATCACACTCGCCACCTGCAACGTACATCAAAAAGGAGGAGTTCGATTTCGATCCACCGTATTCAATCGCCGACGATCACTGTTTCGAGGAGATCAAGGACGAGGACGACGAGGATCTTTTGTTGATGAAGGAAGACGATTCGATTGACAACTCGAATGAAATCTTCTCGGAGGAGGAATCTTCGACGAATAACACCTCGCTAATGCTATCGTCCGACACTAACACGCTGGATACAAACGATTCGAGTATGGTTTCGCACGAACGTAACAAGGAACAGGTGTACCAGTGCTTACTATGTGATAAAAGCTATAGGAAACGCAAATCTCTTGTCATCCACTTTAGCCACCATCCGGGATTTTGTCCCGATTGTGGTAAGCAACGAGGAGTAACCTCTGAGGAAATCGTTGAACACAATCGAATCTATCACAAAAACCGGCCTCACATATGCGAGCACTGCGGAGAAACCTTCACCCGGAATCAACAGTATCAGATACACGTCCAGGGACATTTTATAAGCAAGGATAGGGTAGCGGAGCAAAATTGTAAAAAAACTCACAAGTACAGCTGTAAAACATGCGGTATCGTGTTTAATAATCAGAAATATCTCGAAAAGCACATCCAGAAAACCAACCACCAGGCGGAAGGTTTGGTGTGCGACATTTGTGGTGCTATATTTTGTAACAGTATCAAACTCAGCCAGCATGTAAGCCGCACTCATCACAATGTTTTTACACAGAAAGCTACCTTAGAAAGGAGTATGCTCCTTTCGGGAACAAGTGTAACGGACAAAGCTTACACCTGTGAACAGTGTGGTGCCTCATTTCTGTCCCAGCCCTCATTACGGGAGCACATCAAAACATCACATTCCGTTCCGGAGAACAAATTTGAGtgcaacatttgcaacaaactGTTTGCCGCCAAACGGTCCCTTAAACGCCATAAACTTTGCCATTCGGATGAGCGCGCCTTCCGctgtacggtggaaaattgcaagGAATCGTACAAAAATCAATCGCACCTTGCTCGCCACATGAAGACCGCCCATCATATTGATCCACCCTCGAAGCGGTTGCAGAAGGCGAAGGCGACAGCGGCCgcggcagcagcaaccagTACAGCGATCGTCTCATCAGCTGACCCGAGCTCGACCAGCACGGACTTTATCGGTCACGGTGACGGTGCCACTATGGGTGGAGGATCGTGTGACTCGCTCAAGGGCATCGGCAGCACGTTGAAGAAATCTCTCGGAAGCAGCGAAAAATCACTTGGTGACAGCAGTACTAACTTTAGCGACAATCTGTCATCGTTCAATTACGAGTTCTCGGATACGGCCGCAGGCACATCAACGCCGGCGCTTGTTGCGGCAATAGGTACGGGTGGTGACGGAAGTACGGGTATAATGCTTACCGGTACCAGCCCGATAACGGGCAACCGTACGAACGCTTTAACCTGCAGCGGAACTGGACCTCAAACTGGTGGTGCGTTTAACGATCCCGCCATCAGTTTCGgggtaaataaacaacagcaaccgcagcagcagcagcagcaacaacaacacctcGGTACATGGCGGAATCTCGAGTTCGCATCGGCGACATCGCATCGATCGACGACACTTCCGGGCAGTGGTATGCAATCGTTGCAGGATCCGCTAGCAACTACGGGTGGAAGCTTTCTGGACGGTGGTGGGCACCATCACATTCAAAACCATCAGAACATGCAGCACCAAGCGCATCACCACGGACCAGGAACAATCACAAATCAGATGATCAGCTCTGGCAGCAATTTTATGACCACAAACAATTTACCCGGCAGCACGCGGAGATTCCCTCTTCCGGAGGGTAATTTCATGTGCGAACATTGCGATGAAACGAACTTCATCAACGCTCAACAGTACCAGCTGCACGTGCAGGACCATTTTGCTGCCAAGGAGGGTAAAGATCACCCGAACAAAAAGCTGTTGCGATTAATCTGTAAAACATGTAACCTGGTGTTCGCCACTGGAGCACAGCTCGACCGACACATCCAGAAAACGAATCATCACACGGAGAGCATAGCGTGTGAAATATGTAGTGCAATATTCAACTCCAACTTAAAGGTTTACCAACACATGTTAAAGTGTCACAAGAATGATATTTGGTTTGCTTGTGAACAATGCTCGAAGGTTTTCATATTGAAACAGGACTATGACAAACATCAGCTAGTGCATCAGACGGTTACAGATCGGTCGATCATCTGCGAGCACTGCGCATCATCCTTCCTCACCCAGGAAGCACTAAAGGAACATATCAAAATAGCCCATTCGATGgacaaaaaatacaaatgtaACATTTGTAACAAACTGTTCGCTGCTCGTCGATCGCTTAAACGCCATAAACTGTGCCACGAAGAGGAAGCGGCTTTCCGATGTGTGGTCGAGGGTTGTAAGGAAGCGTTCCGAACAGCAGCCAATCTGGCGAAGCACAAAAAGATGGCACACCCTGCGGTGCATTCGGTGGTTTCTATACCTGCAGGAGGCAATCTGATGCCACATGACCCGATCGTGGATAAGATCGGCGTTGGCCTTGGGATATCTTCCGGCGTTAAAATGGTACCGTCTGGTGCGATGGTGACGGCAGGAACGTCCAATGCTCCAATTGGCGGAGTCACGATAAAGGGTATGGAGAAAGCGTTGCAGCACCATCAAGATGTGCCGGGTGTGACAATGTCACCCGGAGCGCAGACAAATATGATGGGCCAGCATGGTGCGAATACATTGATGGCATTAAACTCAGCACCAGGTCTTAAAACGGATGGGCGATCATCTGCAGGCGGTATGATGGTGGTGCCTCCGTCCAGAACTAGTAGCGCAGGAAGTAGTACCGGTATAGGTGGTAACAACAGTGGTGGTAATGTACCCTACAACCCTTACGATGCTGGAGGAATGAATTACAACAGTGTGCTTGGCCCACCACCAAGTGTCGCTACTTCTGGACCtcatcatccccatcatcatcatcaccatcagcttcagcaacagcagcagcagcagcaccagcaacaacatcaaactcAGCAGCATGTGCAACATCATCCGCCGGCTCACCCTCATCTGCATGCGCAGTCGCAGTTTGTCGGAATGAGTAATTACGCGGCCCGTTCTGGCGGAGGTAACGGAGCAGTCGGCAATCCCGAACAGCAATCTGTTCCTATGGCGTATCGCATGGGAGAATCAGTGGTCCCAGGAAACAGTGCCGCGGCAACAAGCTCCACCAACATTCCGTACGGCTACGGTCAGCTAAACAATGCATTCGAGTGGCAAAGTGTTGAAATGGGAACCGTGGCCAATCCCGATCCAGGCCTAATAAGTGGATCCGCTGGTCAACCGCAAGGTACCACTAGTGGGGCTATGAAAAATGCTGCTAGCAGTAAATATTACAACGCGATGCACGACACCGGTGCTGCTGGTGTATCAGCAGTTGGTGGTGGCAACGCTTCGACGGGATTTCTTTCGCCACAACAAATGCAGCATCAGTCTCCTCATCACACGCAGCACCTGCACCATGCGCAACAAACTCAGCTtccgcagcaacaacagccacaACAGCATCTTCCACATCAAACGCATCATGCGCAAGTTGGTgggctgcaaaacaaacctgTCCAGGATCAGCACAGTAcccatcaacagcaacagcagcagcaacaacatatGATGAATCTGAGCAGCCAAGACATGATGGGGTATCAGGACATGTGGAATGCaaatatgatgaaaatggACTTCCAGGATGAAGGAAATAGTGCAAACACGACAAGCAGTGGTGCCTACAGCAGTTTAGGAAACATTCTGAACAACTTAGAAATGATGGGTGGAAGCAATACTAGTttcgaacaacagcaacaaacccagcaacagcaacagcaaggcTATGACATAATATCCACCCCACGTACAAGCTCAGATGCTCACCCACAATCGAGAGTGCAGTCAGCACAATCGCCCGCATTAACGCCACAGCAAGtacaacatcatcaacatcatcaccagcagcagcagcaacagcagcaacagcagcaacagcagcagttgcatcagcagcaacaagcaCACGCGAAAGGAGGTCACTTTcacaaacagcaacatccATCTCACAGTCATGCTCAAATGCTACCGGCAGTTGTAGAACCGGGACAAATGGTgaaccagcaccaccaccagcatcaacaacatcaccaacagcaacaacaatattttcagGATCATCAAGGTGCGCATCAGCAGCAGGTGGCGCATTCTCACCACTCCGGTGCCATGGGCCATTCGATGGCGATCCATCACGGACATGGCCAGTTGCAGCATGGCCATGGGCATGTCGCACAGCAGCAAACACCGAGTCcacatcatccacatcatcagcatcacttacatcagcagcagcagcagcagcagcaacaacaattgCAACAACAGTACAACGCCCATTTACCGCATCATCCACAGATGGTGCAACACCATGCTCACGCACCGGGACCTCCAGGTCAAGTGGCCAGCGGTAGCGGTGGAAATGGAACTGGTGGCCCCACTCATTTGGCGCATCACAATCCTTCGCATCCTGGCGTTGTTCCCggacagcaacaacaacagtctGGGATTAGTTTCAATCCCTCCCAGAGCGCAGGTGAACAGCATCCTAATGCCAATGCAAATGCACCCGCATTGCCCACGGATGCctcaaaaaccccaaacaatcTTCCCTTCGTCGACAGCTTCaccgaatcgatcgattatCTGCAGCAGTCCTTTCAATACGTGTAA
- Protein Sequence
- MEVKMQHRTRAHMFQIQVKALIKTLKCLQSDDKYQALLFLISAIKLYIKFLYNDCQERLCKPAILKELNNIENVIVVNLLKSRSAPPSGSSLSVATGHTTVSSYGDDIVGKSCLDIDTSTSVRCTDISLGSDGLLLMHPHRTHCSPLAPWDLRGKLLRGNLFDGLPLTGSVALGPDYTSRGGSLLKTGQRATSTNRWLGNVRMNRALVRMIANHDFKLLFNMFEQNIFPAWKIYKNERIFVRKRPALTTVTVRTSLPAICYGSGSSHSPPATYIKKEEFDFDPPYSIADDHCFEEIKDEDDEDLLLMKEDDSIDNSNEIFSEEESSTNNTSLMLSSDTNTLDTNDSSMVSHERNKEQVYQCLLCDKSYRKRKSLVIHFSHHPGFCPDCGKQRGVTSEEIVEHNRIYHKNRPHICEHCGETFTRNQQYQIHVQGHFISKDRVAEQNCKKTHKYSCKTCGIVFNNQKYLEKHIQKTNHQAEGLVCDICGAIFCNSIKLSQHVSRTHHNVFTQKATLERSMLLSGTSVTDKAYTCEQCGASFLSQPSLREHIKTSHSVPENKFECNICNKLFAAKRSLKRHKLCHSDERAFRCTVENCKESYKNQSHLARHMKTAHHIDPPSKRLQKAKATAAAAAATSTAIVSSADPSSTSTDFIGHGDGATMGGGSCDSLKGIGSTLKKSLGSSEKSLGDSSTNFSDNLSSFNYEFSDTAAGTSTPALVAAIGTGGDGSTGIMLTGTSPITGNRTNALTCSGTGPQTGGAFNDPAISFGVNKQQQPQQQQQQQQHLGTWRNLEFASATSHRSTTLPGSGMQSLQDPLATTGGSFLDGGGHHHIQNHQNMQHQAHHHGPGTITNQMISSGSNFMTTNNLPGSTRRFPLPEGNFMCEHCDETNFINAQQYQLHVQDHFAAKEGKDHPNKKLLRLICKTCNLVFATGAQLDRHIQKTNHHTESIACEICSAIFNSNLKVYQHMLKCHKNDIWFACEQCSKVFILKQDYDKHQLVHQTVTDRSIICEHCASSFLTQEALKEHIKIAHSMDKKYKCNICNKLFAARRSLKRHKLCHEEEAAFRCVVEGCKEAFRTAANLAKHKKMAHPAVHSVVSIPAGGNLMPHDPIVDKIGVGLGISSGVKMVPSGAMVTAGTSNAPIGGVTIKGMEKALQHHQDVPGVTMSPGAQTNMMGQHGANTLMALNSAPGLKTDGRSSAGGMMVVPPSRTSSAGSSTGIGGNNSGGNVPYNPYDAGGMNYNSVLGPPPSVATSGPHHPHHHHHHQLQQQQQQQHQQQHQTQQHVQHHPPAHPHLHAQSQFVGMSNYAARSGGGNGAVGNPEQQSVPMAYRMGESVVPGNSAAATSSTNIPYGYGQLNNAFEWQSVEMGTVANPDPGLISGSAGQPQGTTSGAMKNAASSKYYNAMHDTGAAGVSAVGGGNASTGFLSPQQMQHQSPHHTQHLHHAQQTQLPQQQQPQQHLPHQTHHAQVGGLQNKPVQDQHSTHQQQQQQQQHMMNLSSQDMMGYQDMWNANMMKMDFQDEGNSANTTSSGAYSSLGNILNNLEMMGGSNTSFEQQQQTQQQQQQGYDIISTPRTSSDAHPQSRVQSAQSPALTPQQVQHHQHHHQQQQQQQQQQQQQQLHQQQQAHAKGGHFHKQQHPSHSHAQMLPAVVEPGQMVNQHHHQHQQHHQQQQQYFQDHQGAHQQQVAHSHHSGAMGHSMAIHHGHGQLQHGHGHVAQQQTPSPHHPHHQHHLHQQQQQQQQQQLQQQYNAHLPHHPQMVQHHAHAPGPPGQVASGSGGNGTGGPTHLAHHNPSHPGVVPGQQQQQSGISFNPSQSAGEQHPNANANAPALPTDASKTPNNLPFVDSFTESIDYLQQSFQYV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00103863; iTF_00101920; iTF_00108576;
- 90% Identity
- -
- 80% Identity
- -