Amin005461.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Anopheles minimus
Gene Symbol
su(Hw)
Assembly
GCA_000349025.1
Location
KB663610.1:23525392-23528825[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.02 1.1 9.4 1.3 2 20 89 107 88 109 0.92
2 13 0.0012 0.065 13.3 0.7 2 23 165 187 164 187 0.95
3 13 2 1.1e+02 3.1 3.4 1 23 193 215 193 215 0.96
4 13 0.0017 0.097 12.7 1.6 1 21 221 241 221 242 0.92
5 13 6.2e-07 3.5e-05 23.6 0.1 2 23 256 277 255 277 0.96
6 13 8.3e-08 4.7e-06 26.3 0.7 1 23 287 309 287 309 0.99
7 13 1.5e-05 0.00086 19.2 0.2 1 23 315 337 315 337 0.98
8 13 2.1e-05 0.0012 18.7 1.2 1 23 343 365 343 365 0.99
9 13 5.5e-07 3.1e-05 23.7 0.5 1 23 371 393 371 393 0.97
10 13 1.2e-05 0.00067 19.5 0.8 1 23 399 422 399 422 0.96
11 13 6.5e-05 0.0037 17.2 1.0 1 23 428 450 428 450 0.97
12 13 3.8e-05 0.0022 17.9 1.3 1 23 456 478 456 478 0.99
13 13 0.00013 0.0072 16.3 3.9 2 23 485 507 484 507 0.97

Sequence Information

Coding Sequence
ATGGTCGGTAGAAAGTCTGTCGGAGGGGTCCGCACGAGTGGCACGAAGAAGGGAGAAATTTTGGTCAACGTTCAGGTGAACGGTAACGACGAGATAGATCTGGTGCCAGTGAACAAGAAAACGGAGTACGGCAGCACATCGGATGACGATCGGGATGGCGATGAAGAGGAAGATTTCGAGGAGCTGTCCGACAATCCGGACTCGGATCCGGATTTGCTCGAAACGGCCGACGGCCGACTGATACTGGACATGAAACGCAGCAAGTACTGTGGGAAGtgtaaaaagatttttaaaactttgtCGgAACAAAAGGCTCACAAATATAAGTGTCCGGGCGTGGTGGACGAGGTGCAGGACGTTATCCTGAAGGAGCGCAAAGCGGCCAAGCATGCGAACCCGGGCGAAGAATTCCACAAGTACTGCAATCCGAACCCGGACAATCCGTGCTATTGCTGCGGGGAGGATGTGAGCACTGCGCACGTCGGCCACATCCGTTGCAAGTTCTGTCCCAAATCGTTCAAAGCGTACGAGTACATGGAGCGCCACTTGACCTCGATCCACTCGGAGTCGGATGCGTTCCCGTGCTGCTACTGCAACGCCAAGTGCAACACGCAGATCATCCTGGACGAGCATCTGAAGACGCACGACGAGGGCAAACCGTACGCTTGCATGGCGTGCGGGAAGGATTTCACCCGCCGGTACCATCTGGACCGTCACGAAAAGCACTCCAAGTGTGGCATGGTCCCGAAGGAGGTGGAAGTGTTACCGTGCGAGGTGTGCGGCAAGGAGTTTACGCGGATCGACAATCTGCGCGAACATCTGCGTTCGCACATGGGGCAGGGAGCGCGCAAGCGTGACTACCAGTGTCCCTACTGTTCGAAGTCCTTCTACGGGTCATCGTTGCTGAACATACACATCCGCACGCACACGGGCGAGAAACCGTTCCCGTGCGATCTGTGCCCGATGTCGTTCCCGTCGACGGGTGCGCTACGGAAGCATCGGCGCAAGCATACCGGCGAAAGGCCGTACCGTTGCGACGAGTGTTCGGCAACGTTTTCAGCGCGCGAAACGCTGAACCGGCATCGGAAAACGCACACCGGCGAGAAACCGCACGAGTGTGAGGTGTGCGGCAAACGGTTCATCCAGGCCACCCAGCTCCGGGCGCACATGCTCAACCACAGTGGCGAGAGTGCGTTCCAGTGCAGCGAGTGCGATGAAACGTTTAACCGGAAGGCCCGGCTTAACGAGCACATCAAGTTTATCCACAAGGGCGAGCAGCCCTTCGAGTGCGACAAATGTTCCAAAACGTTCTTGCGCAAGGATGATCTTACACGCCACGAGCTGATCCATTCGGACGTTAAGCCCTATGAATGTTTGGTGTGTAGGAAGTTTTTCACCACGAAAAGCGCTATCCTGTTGCACCAGCGGACACACACGGAGGAAAATCCGGTCCAGTGTAAGGTTTGCTCGGGAACGTTTAAACGGACCGATTGCTTGATGCGACACATGCGTACAAAACACCGTGActatttggaaaaaatcatCGACGATACGGAGAAGGAACAGATGAATAAGCTGGTCGCAAAGAGGGAAGCGGAGAAGGAAGCAACGGTGGAAATAGACGGTGCCGTCTACCAGATCACCACGATGGACGATGGCCCCACGAAGGAAAACGCTTCCTACAGTTCGAACCAAACTGTAGAAGTGTTCGAGGTGGTAGAAATCCCGTCAAGCACGTCGGATTCGGTGTCAACCATGTTGCCCACCACATCGGTCCCGTACGAACTGATACCGATTGTGGACGACACGGGCATTGTGTTGGACGAGAACGATGTGGAAGAATTGATAGCCCAATCCACCATTAACCTCACGCAGCCAAACGTCGAGGttgtgaagaaggaaaaggatttGCATAACAAATCCAAATCTCCATCAAATTCGTTTGTGAATGTCCGGCCAAAATCAACGGGATCCAGCGCAACGAAGCTGATTAATAAAACGGCCAATGAGGGTGAATCATCCAAGGTGAAGAACGTGTCCAGTCCCGTAAAACCAACCGGCAGCGGAACGCCAAAGTCCAAACCGGAAGGAACGCCAACGCGTTCGCCAAAGGAATCGCCGCCCAAATCGAtcgcaaagcaaacgaagcagAGTCCCGCCACGAAGGTGGAATCACCCAAACAGGTAAAGCCGGTCACAGCACCGACAGCGGCTCGCCCGAAAGAAGCTAAAGCAAAGACAGTAGATGAAACGAAGGTGAAGCGCAAACGGGAACCGAAGTCTAGCGGTTCGAAACGGGCCCGCACGGATGAGGACAGCATACCGATCTTCCTGAGCGACGATATGTTGGAGCAGAAAATTTCCGAACTGCTGCAGATGCTGATGGGGGACGACATGTTGCGCAGTTTCGGCTGGCCGAATGCACCGGTAGAGGAAGTGCTCGGGCGCGTGATCATGGGCTGCGGTCACCAGCCGACAAAGGGTGAAGAGGTCGGTGATCATACGACGCGTATGCGCGAGAACACCAAGATTCTGTTCTCCGTCACGATGGACGATGACGACATTAAGGCCCTGCTTAACAACCACACGGTCGACGAGGTGATCATGCATGTACTGAAGAACAAATGA
Protein Sequence
MVGRKSVGGVRTSGTKKGEILVNVQVNGNDEIDLVPVNKKTEYGSTSDDDRDGDEEEDFEELSDNPDSDPDLLETADGRLILDMKRSKYCGKCKKIFKTLSEQKAHKYKCPGVVDEVQDVILKERKAAKHANPGEEFHKYCNPNPDNPCYCCGEDVSTAHVGHIRCKFCPKSFKAYEYMERHLTSIHSESDAFPCCYCNAKCNTQIILDEHLKTHDEGKPYACMACGKDFTRRYHLDRHEKHSKCGMVPKEVEVLPCEVCGKEFTRIDNLREHLRSHMGQGARKRDYQCPYCSKSFYGSSLLNIHIRTHTGEKPFPCDLCPMSFPSTGALRKHRRKHTGERPYRCDECSATFSARETLNRHRKTHTGEKPHECEVCGKRFIQATQLRAHMLNHSGESAFQCSECDETFNRKARLNEHIKFIHKGEQPFECDKCSKTFLRKDDLTRHELIHSDVKPYECLVCRKFFTTKSAILLHQRTHTEENPVQCKVCSGTFKRTDCLMRHMRTKHRDYLEKIIDDTEKEQMNKLVAKREAEKEATVEIDGAVYQITTMDDGPTKENASYSSNQTVEVFEVVEIPSSTSDSVSTMLPTTSVPYELIPIVDDTGIVLDENDVEELIAQSTINLTQPNVEVVKKEKDLHNKSKSPSNSFVNVRPKSTGSSATKLINKTANEGESSKVKNVSSPVKPTGSGTPKSKPEGTPTRSPKESPPKSIAKQTKQSPATKVESPKQVKPVTAPTAARPKEAKAKTVDETKVKRKREPKSSGSKRARTDEDSIPIFLSDDMLEQKISELLQMLMGDDMLRSFGWPNAPVEEVLGRVIMGCGHQPTKGEEVGDHTTRMRENTKILFSVTMDDDDIKALLNNHTVDEVIMHVLKNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00105274;
90% Identity
iTF_00105274;
80% Identity
iTF_00105274;