Amin012192.1
Basic Information
- Insect
- Anopheles minimus
- Gene Symbol
- -
- Assembly
- GCA_000349025.1
- Location
- KB664266.1:9164636-9220655[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 0.002 2.9 7.5 2.8 16 38 142 165 132 169 0.82 2 16 0.00049 0.71 9.5 2.1 9 33 164 188 160 193 0.71 3 16 0.00022 0.31 10.6 2.7 6 33 189 216 188 221 0.77 4 16 0.00024 0.34 10.5 2.2 6 33 217 244 216 250 0.77 5 16 0.00086 1.2 8.7 2.3 13 33 251 272 244 278 0.75 6 16 0.00048 0.69 9.5 2.4 5 33 272 300 268 305 0.80 7 16 0.0011 1.6 8.3 2.6 6 33 301 328 300 333 0.77 8 16 7e-05 0.1 12.2 2.0 5 40 328 359 326 362 0.87 9 16 0.0013 1.9 8.1 1.3 18 33 368 384 360 389 0.79 10 16 0.00039 0.56 9.8 1.1 6 30 385 410 384 416 0.77 11 16 0.00068 0.97 9.0 0.8 14 40 420 443 413 445 0.80 12 16 0.0016 2.3 7.8 3.0 13 33 447 468 440 474 0.75 13 16 0.012 17 5.1 3.8 14 35 476 498 468 507 0.76 14 16 0.0045 6.4 6.4 5.7 18 38 508 529 497 530 0.83 15 16 0.0058 8.4 6.1 6.1 19 43 537 558 532 559 0.93 16 16 0.11 1.6e+02 1.9 4.9 13 44 620 648 611 648 0.84
Sequence Information
- Coding Sequence
- ATGCAGGTGCATCCCGCACACAGTGGCAGCGGAGGACATCACCCTCCTCCACCGCCCACTCAGGGACCGCCCCAGTCCGCTCATCCGCCACCACCGCAGCCGATTCCGATCGTGAAGCCGGAGTTTAAGGTGCCACCGATACCGGCCCACCTGATGGATGTGCGCGGTCCGGACGGGTCGCTCGTCAAGATCAACATGCCGGAACATCACGATCCGAGCAAACCGCCGAACAATGTCGAAATGTTGAAGGTGAACATCGAGGATCTCAGCCAGTTTCTATCGTACCATGAGGTCTTCGGGAAGCTGCCCTCCGACATGCTAACGGGCCCGTCCGCTAGCTTAGTGCCATCGTCCTCTACCAACACCGCAACGACCAGTGCGCATAGCAATGTAAATCACATCCGTCAGCATACGGGCGAATCTCCATTCAAGTGTAGCTACTGTGCGAAAAGCTTCACCCGTAAGGAACACCTGACTAACCACGTTCGCCAGCATACCGGTGAATCGCCTTACCGATGTCCGTACTGCGGTAAAACGTTCACCCGAAAGGAACATCTTACGAACCATGTCAGATTGCACACAGGCGAAACACCCTACCAGTGCACTTACTGCGGGAAGAAGTTTACGAGAAAAGAACACCTTACCAATCATGTCAGATTGCATACCGGTGAAACGCCATTTCAGTGCACTTACTGTGAGAAGAAATTCACTCGCAAAGAGCATTTAACTAATCACACGAGGTTGCACACCGGCGAGACTCCTTTTCAATGTTCTTACTGTCAGAAAAAGTTCACTAGGAAAGAACACTTAACGAACCACGTCAGGTTACACACCGGCGAGACTCCTTTTCAATGTTCTTACTGTCAGAAAAAGTTCACTAGGAAAGAACACTTAACGAACCACGTCAGGTTACACACCGGCGAAACTCCTTATCAGTGTACCTACTGTGACAAGAAATTCACTCGCAAAGAGCATTTAACCAACCATGTCAGAATACACACTGGAGAGACTCCCTATCGGTGCACGTATTGTGAGAAGAAATTTACCCGAAAAGAACGTTTAACGTATCACATAAGATGGCACACGGGAGAGACTCCGTACCATTGCACGTACTGCGAGAAAAAGTTCGCCCGCAAAGAGCACCTTACTAATCACGTCAGATTGCACACAGGAGAGACCCCTTATCAATGCACATAttgtgaaaagaaattcaGTAGAAGAGAGCGTTTAACGATTCACACAAGaaTCCATACCGGAGAGACTCCGTACGCATGCACAtattgtgataaaaaatttaGCCGCAAAGAACGATTAACGTATCACATAAGATTGCACACTGGCGAGACTCCCTTCCAGTGCACGTATTGCCAGAAGAAATTTACGCGAAAAGAACATTTGACCAACCATACCAGATTACACACCGGTGAGACTCCGTATCATTGCACCTATTGCGAGAAGAAGTTCATGCGAAAAGAACACCTTACGAATCATATCAGATTGCACACGGGCGATTCACCGCACAAATGTGAGTACTGCAACAAAACGTTCACGCGGAAGGAGCATCTCAACAATCACATGCGCCAGCACAGTGGAGACAATCCGCACTGCTGCAATGTGTGCAACAAGACCTTCACCCGGAAGGAGCATTTGATCAACCATATGAGCCGTTCGCACACGGGAGAGCGACCGTTCCAATGTGATGAGTGTGGCAAATCGTTCCCGCTGAAAGGCAATCTGTTGTTCCACCAGCGCAGCCACACCAAGGGGCAGCCGATGGATCGTCCGTTCCGGTGTGACATGTGTCCGAAGGATTTCATCTGCAAGGGTCACCTGGTGTCGCACCAGCGGTCACACACGGGCGAGAAGAACCATCACTGCCCGCAGTGCAGCAAGTCGTACGTTGAGCGGGGCAACATGCTGCGGCACATGAAGAAAACGCACCCGGACGCAGTCATTCCGGTGTTGCCGAAGCTGCCTCACATCAAGGTCGAACCGAAGTCTACCGTATCTCAGCCCGCGTCCGTGGTGACGTCGCCGGCTCAGGCCACGTCAACAATAACGTCGATTATCTCCAACAATACTCATCCAtcgcagcatcatcatcacattcAACCGAAAATGGAACAGAAATCTCAGAtacatcatcttcatccgcTTCCTCATCAGCATCCAGCTCACCAGCTGCACCACCACATCTCGGCGGGCCCCCCGCCCCCACCGCCATCGATGCATCTGCCGCCGCCAAATCCGCAGTTGGCAGCGCTCGCCCTCCATCATCAGGtccagcagcatcagcagcagcagcaacaacagcagcagcaacagccgcCGCAATCTTCGCCTTCAACGGTACGAACCCAGCCATCCCCTCGTACATCACATCCGCCGCCGCCGcatccacagcagcagcaacagcagcagcagccgccgccgGAAAGCCACCAGCAACAGGGACCGGGCCCAGCTGGACCCCTTCCACCTCAGCACCATACGGTCCCGGTTACTATTATAACCCATGCTGGAAGCATTAATCCGGGCAACATGCCGGTGGTGGATGCGGGCACGGCTAACGGGCGTGTCGGTACGATCCAGATGCATCATCTCGCCGCGGCCCAACAGTCGGCCGAGGAGCATTCGGTGGTTTATTGA
- Protein Sequence
- MQVHPAHSGSGGHHPPPPPTQGPPQSAHPPPPQPIPIVKPEFKVPPIPAHLMDVRGPDGSLVKINMPEHHDPSKPPNNVEMLKVNIEDLSQFLSYHEVFGKLPSDMLTGPSASLVPSSSTNTATTSAHSNVNHIRQHTGESPFKCSYCAKSFTRKEHLTNHVRQHTGESPYRCPYCGKTFTRKEHLTNHVRLHTGETPYQCTYCGKKFTRKEHLTNHVRLHTGETPFQCTYCEKKFTRKEHLTNHTRLHTGETPFQCSYCQKKFTRKEHLTNHVRLHTGETPFQCSYCQKKFTRKEHLTNHVRLHTGETPYQCTYCDKKFTRKEHLTNHVRIHTGETPYRCTYCEKKFTRKERLTYHIRWHTGETPYHCTYCEKKFARKEHLTNHVRLHTGETPYQCTYCEKKFSRRERLTIHTRIHTGETPYACTYCDKKFSRKERLTYHIRLHTGETPFQCTYCQKKFTRKEHLTNHTRLHTGETPYHCTYCEKKFMRKEHLTNHIRLHTGDSPHKCEYCNKTFTRKEHLNNHMRQHSGDNPHCCNVCNKTFTRKEHLINHMSRSHTGERPFQCDECGKSFPLKGNLLFHQRSHTKGQPMDRPFRCDMCPKDFICKGHLVSHQRSHTGEKNHHCPQCSKSYVERGNMLRHMKKTHPDAVIPVLPKLPHIKVEPKSTVSQPASVVTSPAQATSTITSIISNNTHPSQHHHHIQPKMEQKSQIHHLHPLPHQHPAHQLHHHISAGPPPPPPSMHLPPPNPQLAALALHHQVQQHQQQQQQQQQQQPPQSSPSTVRTQPSPRTSHPPPPHPQQQQQQQQPPPESHQQQGPGPAGPLPPQHHTVPVTIITHAGSINPGNMPVVDAGTANGRVGTIQMHHLAAAQQSAEEHSVVY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00107117;
- 90% Identity
- iTF_00105276;
- 80% Identity
- iTF_00105276;