Basic Information

Gene Symbol
-
Assembly
GCA_000349025.1
Location
KB663610.1:2432759-2438686[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 0.49 4.2e+02 0.7 0.1 19 46 222 256 220 256 0.76
2 5 7.7e-13 6.6e-10 38.5 0.0 4 45 265 307 262 308 0.95
3 5 2.4e-11 2e-08 33.7 0.1 1 44 316 363 316 365 0.94
4 5 5.7e-07 0.00049 19.7 0.0 4 46 374 417 372 417 0.90
5 5 1.3e-07 0.00011 21.8 0.1 4 44 426 473 423 475 0.86

Sequence Information

Coding Sequence
ATGTCCAGTGTGAGTTCTGACTGCGAGTCTTCCTACTATACGGAATCGGAAGCAGAAAGTGATTACGTTACGCATGAGGAAGGACAACCGACGGCGCAATACAATCACACCCTCGAGGTGGAAGATATTATACGCGAGCATGTGGATGTTACGACAAAAAACGCAGTCGGTCTCAACCATCAGTATAAAGCGAAACTACTTGTTCTACGGCAGCAGCTAGAAGTGTTGCTTTCACGATGTCAACATCGTTTACTGGAGGTCGAAAAAAGCCTCGATGATATTCGTTTAAATTTGACACCAAAAACGCGTCCGTCACGGCCACGCCATCCCGGGTACATCTGCGGGCAACCGTTTTTCAAGGATTCCGAACTCTACCCCGGCCCCCACAATGAGGACTATCTGTACCGGAAGAACGTCAAGAAGGAGTTTTTCCCCCTGGATATGTTCGAGATGATCGACACGCTCTGGACACGCACGGACAAGCAGATGCTACGGGACAGTGTAGCTAGACAGGCATACGAATTCGTACGAAGGGAAAACCAGCTGCtggaaaaaatgtgtctcAATTCGGGCAATATAAGGCGGATCATAAAGGAAAGGATCGAAATGAAAGCGCTCCCCTTAGAAGAAATCTGGCCGAAAGCGCAAGCATTCGATGGGAAATATGGGCGCCAAAAATTCGTCGTCGACTGGTTAAAAATATCGAACGCCATCATGAACGGACGGCATTCTGCGGCCGCGTGCGAAGGCATGTGGAACAACTATCTGCTGCCCAGTTTGAAAAGATCCATTTGGACGCCCGATGAAGAATCGCGACTGGTCGCGGCTGTTGAAGCGAACGGACGTTCCAACTGGGCGTTGATAGCGTTGAGCGTGGAAAACCGTTCCGAGTACCAGTGTTTGGTGCATTATCAGACCAACTTTTCCGAACTATCGCAGATCAAAAAGATGCCCTGGACGCAGGAGGAGGACGATCAACTGTTACGCTTGGCGAATGAAAACCGCATCGGGAACAGTATCATATGGAACAAAGTCGTTGAACGCATGCCCTACCGGAACAAGGTGCAGGTTTATCATCGCTACAAGTACACGTTGTTGCGCCCGCTGCGTGGAGCCAAATTTGCGGCCGAAGAAGACTGTGTGATAACGGCGTACGTGCAGCAGTTTGGAGATGATTTCAAATTCTTCCCCGAAGATCTGCTACCGGGAAGGACCACGAAACAGGTCCGTGCCAGATACATGAACACGCTGCGCTTCGTTAACACGCACGTCGGTTGGAGCCTGGACGAGGACAAGCGTCTGATGAGCTACATCGCGGAGCATCTTACCGAGGAAGGCCCGGGCAAGATTTCCTGGGCCGAGTGTTCCAAACATCTCGGAAACCATTCGCGGTTAAGTTGCCGCACGCGGTACTACACGATAGAAAGGTTTCTCGAGCGAAATCCCAACGCAACACTGGAGAGTGTACcgagaagggaaaagaaaaagctttcctCTACCGTGACGGGTAAGAATTGGATAAAAACCATCGTGGAAATCAAGAGCGCACCGAAACTGGCGGGAAAATCCGGAACTTCCATCAATCCGCTCGAGGTTGGTAAATCTTCGCTGGCCGAATGGAGTTTGTACGAGCAGATGAAATTTTGCTTCCGTTACAAGTTCGGTAACAAGCTGGCCGTTACTACACTCCACAATCACGTCTACACGGGGACGAAAATGTTGCTCTATCTTTTGGAAGGTTTTAAAGGACCCTCCTCCGACTGCATGTTCCATCCGAAGAGTGAAGCATTACAGATGCAGCAGGCCATACTGCACAGTCCTTTGGATTGGGCCCATCTCGTGTCTATTATGCATCCCAAGGTGTCACTCACGGGCGAGTCAATGCTGTTTTGTCGCTTTCCTCCCAACTTCAACACGGTGCTGGGTTTGCGGGGCGTTTGCCTGAATGCCTGCAGCgaacaaacgaagcaaactTTCCCCGAACAAAAGCCTAAAAAACTCGGCACGTTTAATGAACCAATGTACAATCAAGCGATAGCTGTGTTCGTAGAGCGTTTCCGTAAGATGTTCCATTGGACCATGCTGCTAATGATGCTGAACATTGACGATGTGTCGCTCGAGAGTGAAGAACCGGCGCGCCACGATAACAGGAATGACCATCCCACGATAATCGTACCGGTGAAAATGGATACACTGATGAACGCGGTGAGCTGTGCTTCACATCCGGAACAAAGCGACACAAGCACCATGGAGGGAAACAATCTAAATCTAGTcacaaacataacaataatCGACCCGAAGGATCTTCCAGCTGTTCCCGAATATCAACTCAGGGAAAATGTTCCATACGGCGGAAGCGAATTTAAATGTCAGCAGTACTTAAACGATAAACCGGAACCTAGCAGTAAAACTTCAAAGGCAACCCGTAGATCGCGAACGACAAACAAGGTTAGCAAATCGTTAGGTAATGTTCAGCATGGAGTTGGCGATCATGCGGAACAATATAGCTCTGGGATGGTTTCCTCGACGATTGCTGTTCCTGGAggtatggaaaatggaatgctACAAAATTTACCAACGTTCACTTTCATCAAAATACCCCAAGAAATAACGTTGCTGCATCAGCACCAGAACCTTAGTACAATACCGGGTCACATGACCACCTATGCATCTTCGTCTGTTACGGTTAAGCATGACGATCACACAAACATCATTTACGATGGACATAAAATGAGCCCAATTGTTGAATCAAGCCGCATGGAGGGTAGAGTTATTGTTCCGTTGCAAATGTCCCAGCATCAAATGGTAAGCAACGAAAGTGTAGAAACCGAAGTACGTGCCAAGGTTGATGAAATCAGTACCAGCCCTGCATCCGCTAGCGAAGACATAGTTACGATCGACGTTGATCGTCATGCTTCGAACAATTCTAACACATGTAGTGAAAATCAGGCGCCGGAATGCTTTCCCCAAACGAAACAGAACATGCTGGTCCCATACAATCGGATTGCATACGAAGGAAATTGCCTGGCAAACAACGTTAttgATGATGTCAATGGTGCAAGTGGACCTATGGATATTTCACCGCACGCCGGCAACGATTGTCAACCATCTGGGCATATCACGTTAATGAAACCTTTGGAAATGCTTCATCAGAATCAAGACAacgaaagggggaaaatggaaatcgaATCCGTAGAACGAAATGAGGATTCCGCGCATCAATTGCAAGAGGGCGTGAATGTTGTAACGGGACCAATCCCATGCACAAAGTTTGATTCGAACGAAGAGCTCATGCCAGACTTGCAGGAACCGCTTACCGCCGTAGATATCATTCGAATGTTACGCGCACGACATAATACTCAGTATTTTGAAGACAGTGAGGAGAATGAAGacgaatttgaaaatgtaccaaatgactaa
Protein Sequence
MSSVSSDCESSYYTESEAESDYVTHEEGQPTAQYNHTLEVEDIIREHVDVTTKNAVGLNHQYKAKLLVLRQQLEVLLSRCQHRLLEVEKSLDDIRLNLTPKTRPSRPRHPGYICGQPFFKDSELYPGPHNEDYLYRKNVKKEFFPLDMFEMIDTLWTRTDKQMLRDSVARQAYEFVRRENQLLEKMCLNSGNIRRIIKERIEMKALPLEEIWPKAQAFDGKYGRQKFVVDWLKISNAIMNGRHSAAACEGMWNNYLLPSLKRSIWTPDEESRLVAAVEANGRSNWALIALSVENRSEYQCLVHYQTNFSELSQIKKMPWTQEEDDQLLRLANENRIGNSIIWNKVVERMPYRNKVQVYHRYKYTLLRPLRGAKFAAEEDCVITAYVQQFGDDFKFFPEDLLPGRTTKQVRARYMNTLRFVNTHVGWSLDEDKRLMSYIAEHLTEEGPGKISWAECSKHLGNHSRLSCRTRYYTIERFLERNPNATLESVPRREKKKLSSTVTGKNWIKTIVEIKSAPKLAGKSGTSINPLEVGKSSLAEWSLYEQMKFCFRYKFGNKLAVTTLHNHVYTGTKMLLYLLEGFKGPSSDCMFHPKSEALQMQQAILHSPLDWAHLVSIMHPKVSLTGESMLFCRFPPNFNTVLGLRGVCLNACSEQTKQTFPEQKPKKLGTFNEPMYNQAIAVFVERFRKMFHWTMLLMMLNIDDVSLESEEPARHDNRNDHPTIIVPVKMDTLMNAVSCASHPEQSDTSTMEGNNLNLVTNITIIDPKDLPAVPEYQLRENVPYGGSEFKCQQYLNDKPEPSSKTSKATRRSRTTNKVSKSLGNVQHGVGDHAEQYSSGMVSSTIAVPGGMENGMLQNLPTFTFIKIPQEITLLHQHQNLSTIPGHMTTYASSSVTVKHDDHTNIIYDGHKMSPIVESSRMEGRVIVPLQMSQHQMVSNESVETEVRAKVDEISTSPASASEDIVTIDVDRHASNNSNTCSENQAPECFPQTKQNMLVPYNRIAYEGNCLANNVIDDVNGASGPMDISPHAGNDCQPSGHITLMKPLEMLHQNQDNERGKMEIESVERNEDSAHQLQEGVNVVTGPIPCTKFDSNEELMPDLQEPLTAVDIIRMLRARHNTQYFEDSEENEDEFENVPND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-