Basic Information

Insect: Anopheles minimus
Gene Symbol: bab1
Assembly: GCA_000349025.1
Location: KB663943.1:6595116-6606698[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 2.2 4.1e+03 -2.9 0.0 29 36 231 238 231 245 0.80

2 3 4.4e-13 8.1e-10 37.8 0.0 1 45 478 522 478 522 0.95

3 3 0.018 33 3.9 0.8 4 20 651 666 650 666 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	2.2	4.1e+03	-2.9	0.0	29	36	231	238	231	245	0.80
2	3	4.4e-13	8.1e-10	37.8	0.0	1	45	478	522	478	522	0.95
3	3	0.018	33	3.9	0.8	4	20	651	666	650	666	0.93

Sequence Information

Coding Sequence: ATGAGTAGCAGCGAAGGACAAACGTACTGTCTGCGATGGAACAATCACAAATCGAACCTCGTCGAGATACTGGATGCGCTGATCAAGATGGAGTGTTACGTCGACTGTACGATCTATGTCGACGATCAGGTGCAGTTCAAGGCGCATCGTGTTGTGCTCGCCGCCAATTCACCCTACTTCCAGACGATCCTGCAGGATGTCCCGATGGATCACTGTAGCATTCTGTTCCCGGGTGTGCAGGAGTTCGAGATGCGTGCGCTGCTAGAGTACATGTACACCGGTGAGGTGAACGTAACCCAGGCACAGATACCGCGTATCATGAAGATCGCCGAACAGCTGGAAGTGAAGGGTCTTTACGATATGGCTGATCTGAAGGGTCGCTTCAACAAAATGGTCGATGTAGATCATTTGATGCGTGATCGCGACCCAGCCACAACGCTACTCGCGAGCAACAATAACTACAGCAGCAAAGGCTCGTCGACTACCGGATTTGGAGGTGCTACAGCTTCATCCTCTTCGTGGAAAGACGCACCGCCGActagtagcagtagtagtggtggtggtggtggcagcaATAGTCACTACTCacaccatcaacatcagcaccaGTCATCACCAGTCATTTCGACCTCGACGAACATATCGATTGCTCAAAGCAGCAGTTCCTCGCCGCCGTATGCCTACAAATCTCCGTACTCCAGTCTATACTCACGCAGCCCGGGTGCGGTAGAGCGTGATCGTGAACGGGAAGAACGTAGCCGCGATCGCTCCTCATCCTTCTCACACACGGCCACCTCTCCGCATCGCATCCAGTCCACCTCGGGTTCCTCGGCATCATCGGTTTCGGCACAGATCGCACTGCAAGCACAAGGCGGCAACCATCAATCGTCCACACATCAGTCCAGCAGTTCCTCCAGCGCTACCTCGGTTTCTTCCCAACCGTCgacagctgcagcagccgcGGCACTAGCTGCCGGTTGGCCAGGACTTGGTCAGACACAGCTGCACAGCATGCTCAGTTCGGCGTACGATTCCAGCACCGATATGAACCCGCTCAAGCGCAAGAAATTGCAATCCATGTCCAGTATGCTCCGAGACACTCCAATTCTACGAAACGTACTGGCGCAGGCGAATCCGGCCGACTCCTCACAAACATCCGGTGGAGGGGTTCCGGCAGGTGCAGCAGCAACGGTAGCCACGATACAAACGATCCAAGGTAGCATGAAGCAAGATCCCGAGAGACCCAGCAGTCATCACTCCAATGGCAGTGGTTATAAGTCAATCAAGGAACAATCGCATTCACCATACGCGGACAAATCCTTCGATGATGATCTGCTGGACTCGCCGCATAATTTCAGTGGCGATGCTCGGTTGGCTTCGTACGTGCCACATCAACAGCAGAAGCCGGAATGGAAGCGCTACAAGCAGTACACTCGTACGGACATCCTTAACGCGATTGAGTGTGTGCGCAAGGGTATGAGTGCGTTGCAGGCTTCGCGGAAGTTTGGTGTCCCATCGCGTACACTCTATGACAAGGTGAAGAAATTGGGCATTACCACCGGTCGTCCAATCAATAGGGCGCTCAAACGATCACCCAGTTCTAGTGGCAGTCCGGCATCCTTCCCGTACGGGTTAAGCGGTGCGAGTCACATGTTTGGGCCAGGCAGTGGTGCACCCGGTGGTTCACATCCGGGAGATCACCATCAACAGATGCCTTCTCAGTCACAACAACAAGACGACGAAGCATCAGCAGCGGCAGCTGCAGCGGCGGCGGCTGCTATGGCACACCATGAAGCTGGTCGGATGATTAAGCTAGAGCACGGAAGTCATCACGGATTGCCACCAACGATCCCGCATCCTGCCGCTGCTTTGCTAGATCCTTCCTTCTTGCAGCAAGCCCTGGAAGCTCGTGGTGGAGACATTGCCGGCCGTGAGGCACTTCATGCGATGGCCTTTGCGGCAGCGGCTCATGCGGCTGTTAATGGTATGAGCACGTCACCGGGCACACACGGTACTGCTCGATCACCGAGCCCGAGCGTTCTGATGAAGTACATGCGCTCGGTTTCGATGAGTTCCCCCGAGGATGATCGTCACCATCCGGTGCAACATCAACAGCGAGAACGGGAGCGAGATTTAGCCGAAGGACATCCTCATCGGGATGGCCACCATCACAATGGATCGGATCCGGTCTACGCGAGGCGCGATCATCCCATGGAACAGGACTCGATCGATAACATGGGCAGTGACTGTGGTGAACGTCCACCAAGTGGTCCGGGACCGGTGGAAGGACAGGATGATCACGTAGAGGATCTATCCATGGGTCCGAAGCGTGACTCAGAGGAACGAGGAGCCTCAGTTTCGCCACCACCCTCGTCAGTTGTGCGGGCAACGCAACGATCGCGATCACCTTCACCACAACCGGCTCCACCCTCGTTACCACCCCAGCAACAGGGTGTCATCGTGCCAGCACCCGGTAAGTTAAAGGAAGACTACAACATCCCCATTAAGCGGGAAATCATCGCCGACAGTAACGCACCGTCGGAGTCGTCGTAG
Protein Sequence: MSSSEGQTYCLRWNNHKSNLVEILDALIKMECYVDCTIYVDDQVQFKAHRVVLAANSPYFQTILQDVPMDHCSILFPGVQEFEMRALLEYMYTGEVNVTQAQIPRIMKIAEQLEVKGLYDMADLKGRFNKMVDVDHLMRDRDPATTLLASNNNYSSKGSSTTGFGGATASSSSWKDAPPTSSSSSGGGGGSNSHYSHHQHQHQSSPVISTSTNISIAQSSSSSPPYAYKSPYSSLYSRSPGAVERDREREERSRDRSSSFSHTATSPHRIQSTSGSSASSVSAQIALQAQGGNHQSSTHQSSSSSSATSVSSQPSTAAAAAALAAGWPGLGQTQLHSMLSSAYDSSTDMNPLKRKKLQSMSSMLRDTPILRNVLAQANPADSSQTSGGGVPAGAAATVATIQTIQGSMKQDPERPSSHHSNGSGYKSIKEQSHSPYADKSFDDDLLDSPHNFSGDARLASYVPHQQQKPEWKRYKQYTRTDILNAIECVRKGMSALQASRKFGVPSRTLYDKVKKLGITTGRPINRALKRSPSSSGSPASFPYGLSGASHMFGPGSGAPGGSHPGDHHQQMPSQSQQQDDEASAAAAAAAAAAMAHHEAGRMIKLEHGSHHGLPPTIPHPAAALLDPSFLQQALEARGGDIAGREALHAMAFAAAAHAAVNGMSTSPGTHGTARSPSPSVLMKYMRSVSMSSPEDDRHHPVQHQQRERERDLAEGHPHRDGHHHNGSDPVYARRDHPMEQDSIDNMGSDCGERPPSGPGPVEGQDDHVEDLSMGPKRDSEERGASVSPPPSSVVRATQRSRSPSPQPAPPSLPPQQQGVIVPAPGKLKEDYNIPIKREIIADSNAPSESS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00101774;
90% Identity: iTF_00099760;
80% Identity: iTF_00105241;