Amin001117.1
Basic Information
- Insect
- Anopheles minimus
- Gene Symbol
- -
- Assembly
- GCA_000349025.1
- Location
- KB664165.1:6060859-6062331[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.2e-09 2.2e-06 26.8 0.1 3 36 275 308 273 313 0.92 2 3 0.0058 11 5.4 0.0 23 35 344 356 328 365 0.83 3 3 1.7e-13 3.1e-10 39.1 0.1 4 38 385 419 383 425 0.90
Sequence Information
- Coding Sequence
- ATGGAGAACGTATCGTGCGTAAAGTGGACAAACTTTCAGGACCATATGGTGCTTGCTATTCATGAAATCTTTGAGTATCATCAGTATGCAGACTGCCGATTGGTCGTACCCGAAGGAGAATTGTGTGCAAATCGAGCGATACTTTGCATGGCTTCAAGATTCTTCGCTGCAATCTTCGCTGGAACAATGCACTTATCCGCCATAGACGCGGATCGCCTAACGATTCTTATTCCGGATCTGAAGCTTTCGTGTTTACGATGGGTTCTACAATTCATCTACACCGGGGAGGTTTATTTGCAACCGCACGACGTAGCACCGTTCATAGAAGCTTGTCGATTTCTACAGATACGAGGAGTACCGTATAACGAAGAACAAACCGTCGAGATTGATTTCGGAACACTCATTAGTGCAATGCAGGAGGGGACGATTGTTAACAACGACGGATCTGAAGCTACTGCATACTTACAAGAAGATGTGCAACAATTTAGTTTAGCAAAAACAGTCGAACAGTCAAATGCATTgaaagcagaaaatgaaaccattaaaATCCTGTGTCAGGAAGTAAGCTTAAGCGAGCCGGCGATCGAGTGCAACTCTTCCCCGGATTACCCGATGGAACATGAAGATAGTAATGCAGCGATTCGGGATCTGTTACGTGAAGGATTGGAAGCTTTGCCCTATCAAGCGGAAAACTCTACTGGTTGCAACCCAAGCATGGACGAAGGAAAACACCAAAACTCAACAAACTACGCATCAAACGATCTATTGGAAGCGATTGCAAAATCACCTTCTGAAGAACATTTAGATCCCTCCTGCTACGATACTCGTCTTAGTGCGGCCATCGACGCGATCATAAATCGTGGCATAAGCTATCGGGTAGCATCGAAACAGTACAACATCGCCAAGACTGTGCTATGGCGAAGAACAATGAAAATGCCCCGACTGGTTCGTCCGACTTCACCGAAATTAGCTAACCACCGAAGCGAGGCCATCGATGCGCTTAAATCCGGTGAGAAATTGGTTCACGTAAGCCAACGGTTCGAGATTCCACTGTCGACGCTCCATCGGGACAAGATACGACTGTACAAGAAGGGTATTCTACCGAGCAAAGTAACATTGAAACAGCGTGATAAGGATGAATTCTTCCGGCAACGGCTGGCAGAGGCAGTGAACGAATGCATTGCAGGGCGTATGTCCCTTTCGGAAGCGGCACGGGTGTATAATATACCGAAAACCTCCATATGGAGGAAGGTTCGTTCGTCAAAGACGAGAACTAGCTGCACAGGAGGGAAAGAAATGGCAAGAGACCAAACGAAATATGATCAGGATGTTCGGGTTTTGGAACATTGCGTGGAAATGGACAAAGAGGATGCTGAACACACGGTTGGAAACTTGTTCCACGGTTCAGCATACATGTCTAACCGGAATGCGGACGTTTCTGGGACAGAATTAACGCAGGATTCAATTCTATAG
- Protein Sequence
- MENVSCVKWTNFQDHMVLAIHEIFEYHQYADCRLVVPEGELCANRAILCMASRFFAAIFAGTMHLSAIDADRLTILIPDLKLSCLRWVLQFIYTGEVYLQPHDVAPFIEACRFLQIRGVPYNEEQTVEIDFGTLISAMQEGTIVNNDGSEATAYLQEDVQQFSLAKTVEQSNALKAENETIKILCQEVSLSEPAIECNSSPDYPMEHEDSNAAIRDLLREGLEALPYQAENSTGCNPSMDEGKHQNSTNYASNDLLEAIAKSPSEEHLDPSCYDTRLSAAIDAIINRGISYRVASKQYNIAKTVLWRRTMKMPRLVRPTSPKLANHRSEAIDALKSGEKLVHVSQRFEIPLSTLHRDKIRLYKKGILPSKVTLKQRDKDEFFRQRLAEAVNECIAGRMSLSEAARVYNIPKTSIWRKVRSSKTRTSCTGGKEMARDQTKYDQDVRVLEHCVEMDKEDAEHTVGNLFHGSAYMSNRNADVSGTELTQDSIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00105256;
- 90% Identity
- iTF_00105256;
- 80% Identity
- iTF_00105256;