Basic Information

Gene Symbol
ct
Assembly
GCA_000349025.1
Location
KB663610.1:1927547-1956740[-]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 1.9e-27 1.2e-23 82.4 0.0 3 72 250 320 248 325 0.95
2 4 0.15 9.7e+02 -0.6 0.0 31 50 449 468 442 470 0.79
3 4 3.2e-32 2.1e-28 97.7 0.0 3 77 704 779 702 781 0.96
4 4 5.3e-31 3.4e-27 93.8 0.0 3 77 996 1071 994 1073 0.96

Sequence Information

Coding Sequence
ATGAAGGGCTTTATATCGCTCCTGTTCGAGGAAGTTGGACGGCTGCGGACGGCCATCGCCAATATTCAGGAATCGCACAACCTGCAGATCCAGCGGCTCGAGGACCGGCTGGAGGAGAAGCGGCAACACATCGTGCGGCTCGAGTCGCGCATCGAAAAGCAGCAGGACTTTGACGAtatcaaaaaggaaaatagTATGCTTCGCTCGGTGGATCTGAGTGCGTCCCACGAGTCGAAACAATTCCAGGAGCTACTCCTCGAACGCACCAAAGCGCTGGCAGCACAAACTGAGGCAATCAAATCATCGTCGACCACTTCGGAAGATCTACCCACGCTGGCGCATCATGGCGCGGGTCTCGACCAGGACAAAGCCAGCAGCCATCACGAGAACTCGTCCTCCGCCAGCACACCGATCCTGCGCGAAGACTCTTCGCGGCACGACGACCGCCACCTGAACGGGGGCGGTGGTCTCACACCCATGTCGATCTCCAAGAGCCCACTCGAGGACAACAATAACACGCTGGGAGCGCTCAGCCGGCTCGATGGGGCCGCCTCCGGCAATCTCATACAGGGACTTCCGTTTCAATTCCAAGAGCGGGGACACTTCCGGTTTGCCGATGCATCCGACATGCAGATGCCACCGGGCTCGATGGTCGGCCGGCTCGGCGACTCGCTCATCCCCAAGGGTGACCCGATGGAGGCGAAGCTGCAGGAGATGCTACGGTACAATATGGACAAGTACGCTAACCAAAACCTGGACACGCTGCACATTTCGCGCCGCGTCCGGGAACTACTGTCCGTGCACAACATCGGCCAGCGGTTGTTCGCGAAGTATGTGCTCGGGCTGTCGCAGGGTACCGTGTCGGAGCTGCTGTCGAAACCGAAACCCTGGGACAAGCTAACGGAGAAGGGACGGGACAGCTATCGGAAGATGCACGCCTGGGCGTGTGACGAGAACGCCATCATGCTGCTCAAATCTCTCATCCCCAAGAAAGGTGCAGAACCCGGAATGCCATCTTACGGTCGACCAGACGGAGATCTCAGCGATGACCGCATGCAGCAAATCCTGTCCGAAGCCTCCATGATGAAGCGAGGCGATCAGCCAACTCCCCAGCAGCAAGcgcaccatcagcagcaaatGCGCGAGCAaatgcagctgcagcagcatcagctACAGCAACTTCACCTTAGCGGGCTGGATGACTCTACCCAGCATAGTGATAACGACTCCAAATCTCCACACAACCGTGATGTGCATTCACCCTTCTCCAAAGACTATCTCACCGGGCGTTTGGGAAGTACGGGACGACCCAAAAAGTACGATAACGACGACATCTCGCAGGATAAGATCGCGAAGATCTATCAGGAAGAATTCTCCAAACTGATGCGCAGTCCTCGAGAGTTCCCAAACGGTGGTATGCCACCAATGGATCGCGTACCAGATGACAATCTCCGGATGGCATTCGAGGCTTACCATCGTGAACTGGCCAAACTGCAGCAAAACGCTTCTGCTGCCCTTCCGGGCATGCCCAACATTTCCAACCTCCCCAACTTCTTGGCACtccaacaccagcagcagcagcagcaacagcaacagcagcagcaacagcaaccatcACAACCTTCCACACCGTCGGGACAACCGTCGACTCCCTCATCCCAACCTTCGCAGCACACAACGACCGGGTTGAACGGAGGTTCGGCTCAGGATCTTTCCCTGCCAAAGGATAAACAATCGTCCTCATCCAAGCTGAACGGTGCGCTATCCGATGCCGAATCCGATGCCGACATGAGCCAGAAAGAGCTGGATGAAAGCATGAAACACAGCGCCTTCAGTCTGGTGAAACCAAAGCCTTCGGAACCGTCGGGCATCTGTACGCCAACAACGACCGCGTCCTCAGCGGCGCCCAGTCCCATCGGCAACAGTATCCTTCCCCCGACAATCACGCCCACGGACGATTTCTCCGTCGCTGCCAGTCCACTGCAGCGGATGGCGTCGATCACCAACTCGCTCATCACGCAACCACCCGTCACGCCACATCACACGACGCAGCAGCGTCCGCTGAAAGCCATCCTGCCTCCCATCACTCAGCAACAGTTCGATCTGTACAACAATCTCAACACGGAGGACATTGTGCGACGCGTCAAAGAATCGCTCTCGCAGTATTCCATCAGCCAGCGACTGTTTGGCGAGTCCGTCCTGGGTCTCTCGCAGGGTTCGGTCAGTGATCTGCTTGCCCGACCGAAGCCCTGGCACATGCTCACCCAAAAAGGCCGCGAACCCTTCATCCGCATGAAGATGTTCCTGGAGGACGAGAACGCGGTGCACAAGCTAGTCGCCAGTCAGTATAAGATCGCGCCCGAGAAACTGATGCGCACGGGTAACTACAGTGGCACGCCCCAGCTGCCCGGGTTGCACATGCAGAAGCAAATGCCTTCATCCATGCCGAAAATGTTGAGCGACTCGATCAGCAAGCTGCAGCAGGATCAGCAGAAAACGCTACTCCAGCTTCAGATCTCTCAAATGCAGCAGCAAATGCCCACGGCCCAAGCTGCCCAGGCCGCCGcacagcatcagcatcagctgGCCGCAGCAgctgccgccgctgccgctgcACATCACGCAGCCCAGGTGCAGGAAGTCCAGCGCCATTCGGCACAGCAACCACCTTCCTCCCAGCCATCGCCACTCGGTGCCATGGGCTCCCAGAATTCCTCCTCACAGCAACGGCCTCAGCAACCTTCACCGCAGACGATGCTCCTGACGCCGCCGGGCATTCCTCCCCAGCATGCCATCGCTCTGCAGGGTCATGCGGGGGCGCAAGAGAAGAAGTCCTCCATCATGATGCCAATCCACTCACCCGTACCGCAAGGTCCGCCGGGTTCCGTTGGACAGCATGCGTCCCAACCGGGTGCACCAAACTCCATGCGAGGATCCCTCCACCAGCACATCTCACCGACGGTGTACGAAATGGCCGCGCTAACGCAAGACCTCGATACGCAGGTGATCACGACCAAGATCAAGGAAGCGCTGCTGGCGAACAACATTGGGCAGAAGATCTTTGGAGAGGCTGTACTCGGACTTTCGCAGGGTTCCGTTTCGGAACTGCTGTCCAAACCGAAACCCTGGCATATGCTCAGTATCAAGGGTCGCGAACCATTCATCCGGATGCAGCTATGGTTGAGCGATGCGAACAACGTCGAGCGGCTGCAGGTGTTGAAGAATGAACGACGCGAAGCCAGCAAACGACGTCGATCGACCGGCCCTGGTGGACAGGACAATAGTAGCGATACCTCGAGCAACGACACGTCCGAGTTCTACCACTCCAACTCACCCGGACCTGGTTCGGTTGGATCGGCTACGGCTCCTCCCAACAAGAAGCAGCGTGTGCTGTTCTCCGAGGAGCAGAAGGAAGCGCTCCGGCTAGCGTTCGCCCTCGATCCATACCCCAACGTGCAGACAATCGAATTTTTGGCTAGTGAGCTTGGGCTGTCGACTCGCACGATCACCAACTGGTTCCACAACCATCGAATGCGGTTGAAGCAACAGGTTCCCCACGGTCAACCCTCCGAACCGATTCCTTCGCGGGAAAACCAATCCGGCGCACCGTTCGATCCGGTACAGTTCCGCGTTCTGCTCGGCCAACGGCTGATGGAAATCCAGAAGGAACGGTTAGGTCTGAGCGGCATGCCACTACCCTATCCGCCTTACTTCGCGGCTACCGCACCTGCCACCAATCTGGCCGCTCTGATCGGGCGTGGATTCATGCCCGGTAGCGAGGCAGATCTGGCGGCACTCAACAAGAGCATCAGCGAGCAGATGAGTGGTCTCGATCTGTCCATGCCATCCACGTTGAAGCGTGAAGGTGATGACGACTACGAGGATGATGCCGAAAACGAAGAGGAAGCCGGAAGTGGTCATATGAGCGATTCGGAATCGATGGACGGAAGCAGCAAGCGTGgaggcgatgatgatgacctCAAGACGTCCCTGTCGCTCGCCAGCTTACAGGCCATGCAACGGATCAGCCGCCGTAAGCCAGCCGCTCCACAGTGGGTCAACCCGGACTGGCAGGATCCGGACAAGAAAACCGCAACGGCAGTCTCCAACATTCCCTCCGCCAAGAAGGATGCCGCGGATGCCATCATCAAcggggtgtgtgttttgcagcCGCCCGATGGTGTGCCCTCGGTGCAGCAACGTTTCGCCGCGGCCATGGCAGcggctgcagctgctgctgttgcggcgGCCACCGGTGCAGGAGCGACCGTGCCTTCCCAAAGCCAAGACGACCCGTCGAGTGATGCGGAAAACGAAGACGATGACGCTAAGTCGACACACTCCAAGCACTCCTCTTACGGTTCGGACGGTAAGCTGGACGAGGATCGACCGAGGACCTCGAACGACGAATCGGAATCGGAAGCACCAGCGGATGCGCTGCGACCGGCGGAAGAGACGGCCCCGGAAGTGACGCAGGAGAGCAACGGAAACCGATCGGGCTCCGCAAGTCCCGCTTCCTCCTCGATAACGGTCAAGAAGGAGATCCTCGAAGATAACAACGGTGATCGGTGGGATGCGTACTAG
Protein Sequence
MKGFISLLFEEVGRLRTAIANIQESHNLQIQRLEDRLEEKRQHIVRLESRIEKQQDFDDIKKENSMLRSVDLSASHESKQFQELLLERTKALAAQTEAIKSSSTTSEDLPTLAHHGAGLDQDKASSHHENSSSASTPILREDSSRHDDRHLNGGGGLTPMSISKSPLEDNNNTLGALSRLDGAASGNLIQGLPFQFQERGHFRFADASDMQMPPGSMVGRLGDSLIPKGDPMEAKLQEMLRYNMDKYANQNLDTLHISRRVRELLSVHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDENAIMLLKSLIPKKGAEPGMPSYGRPDGDLSDDRMQQILSEASMMKRGDQPTPQQQAHHQQQMREQMQLQQHQLQQLHLSGLDDSTQHSDNDSKSPHNRDVHSPFSKDYLTGRLGSTGRPKKYDNDDISQDKIAKIYQEEFSKLMRSPREFPNGGMPPMDRVPDDNLRMAFEAYHRELAKLQQNASAALPGMPNISNLPNFLALQHQQQQQQQQQQQQQQPSQPSTPSGQPSTPSSQPSQHTTTGLNGGSAQDLSLPKDKQSSSSKLNGALSDAESDADMSQKELDESMKHSAFSLVKPKPSEPSGICTPTTTASSAAPSPIGNSILPPTITPTDDFSVAASPLQRMASITNSLITQPPVTPHHTTQQRPLKAILPPITQQQFDLYNNLNTEDIVRRVKESLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDENAVHKLVASQYKIAPEKLMRTGNYSGTPQLPGLHMQKQMPSSMPKMLSDSISKLQQDQQKTLLQLQISQMQQQMPTAQAAQAAAQHQHQLAAAAAAAAAAHHAAQVQEVQRHSAQQPPSSQPSPLGAMGSQNSSSQQRPQQPSPQTMLLTPPGIPPQHAIALQGHAGAQEKKSSIMMPIHSPVPQGPPGSVGQHASQPGAPNSMRGSLHQHISPTVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDANNVERLQVLKNERREASKRRRSTGPGGQDNSSDTSSNDTSEFYHSNSPGPGSVGSATAPPNKKQRVLFSEEQKEALRLAFALDPYPNVQTIEFLASELGLSTRTITNWFHNHRMRLKQQVPHGQPSEPIPSRENQSGAPFDPVQFRVLLGQRLMEIQKERLGLSGMPLPYPPYFAATAPATNLAALIGRGFMPGSEADLAALNKSISEQMSGLDLSMPSTLKREGDDDYEDDAENEEEAGSGHMSDSESMDGSSKRGGDDDDLKTSLSLASLQAMQRISRRKPAAPQWVNPDWQDPDKKTATAVSNIPSAKKDAADAIINGVCVLQPPDGVPSVQQRFAAAMAAAAAAAVAAATGAGATVPSQSQDDPSSDAENEDDDAKSTHSKHSSYGSDGKLDEDRPRTSNDESESEAPADALRPAEETAPEVTQESNGNRSGSASPASSSITVKKEILEDNNGDRWDAY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00093261;
90% Identity
iTF_00105043;
80% Identity
iTF_00105043;