Amel009375.1
Basic Information
- Insect
- Anopheles melas
- Gene Symbol
- -
- Assembly
- GCA_000473525.2
- Location
- AXCO02003343.1:12931-23700[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.00014 0.28 11.0 1.2 6 38 134 167 132 168 0.83 2 9 0.00015 0.29 11.0 1.9 8 33 165 190 162 195 0.71 3 9 6.4e-05 0.13 12.2 2.8 6 33 191 218 188 224 0.79 4 9 9e-05 0.18 11.7 2.3 6 33 219 246 218 252 0.77 5 9 0.00032 0.62 9.9 2.4 13 33 253 274 246 280 0.75 6 9 0.00032 0.62 9.9 2.0 6 32 275 301 272 308 0.79 7 9 0.0002 0.39 10.6 1.8 13 33 309 330 302 335 0.75 8 9 0.00031 0.6 10.0 2.5 6 33 331 358 328 363 0.79 9 9 3.6e-05 0.07 13.0 2.3 5 40 358 389 355 389 0.87
Sequence Information
- Coding Sequence
- ATGGTGCATCCCGCACACAGTGGCAGCGGAGGGCATCATCCGCCACCGCCGCCCACCCAGGGACCGCCCCAGTCCGCTCATCCGCCACCGCCCCAGCCGATACCGATCGTGAAGCCGGAGTTCAAGGTGCCCCCGATACCGGCCCACCTGATGGATGTGCGCGGACCGGACGGCTCCCTGGTGAAGATCAACATGCCGGAGCATCACGATCCGAGCAAGCCGCCGAACAACGTGGAAATGCTGAAGGTGAACATCGAGGATCTCAGCCAGTTTCTGTCGTACCACGAGGTGTTCGGCAAGCTGCCCTCCGATATGCTGACCGGCCCGTCCGCCAGCCTAGTGCCATCATCCTCCACCAACACCGCTACGACCAGTGCGCATAGCAATGGTAAATTAAATCACATCCGTCCGGGGCCTACGGGCGAATCTCCATTCAAATGTAGCTACTGCGCGAAAAGCTTCACCCGTAAGGAACACCTGACTAACCACGTTCGCCAGCATACCGGTGAATCGCCTTACCGATGTCCGTACTGCGGTAAAACGTTCACCCGAAAGGAACATCTAACGAACCATGTCAGATTGCACACAGGCGAAACACCCTACCAGTGCACATACTGCGGGAAGAAGTTTACGAGAAAAGAACACCTTACCAATCATGTCAGATTGCATACCGGCGAAACTCCATTTCAGTGCACTTACTGCGAGAAGAAGTTCACTCGCAAAGAGCATTTGACTAATCACACGAGGTTGCACACCGGCGAGACTCCTTTTCAATGTTCTTACTGTCAGAAAAAGTTCACTCGGAAAGAACATTTAACGAACCACGTCAGGTTGCACACCGGCGAGACACCTTTTCAGTGTTCTTATTGCCAGAAGAAGTTCACTCGCAAAGAACATTTAACGTACCACGTCAGGTTGCACACCGGCGAGACTCCCTTTCAATGTTCTTACTGTCAGAAAAAGTTCACGCGGAAAGAACACTTAACGAACCACGTCAGGTTACATACCGGCGAAACTCCTTACCAGTGTACCTACTGCGACAAGAAATTCACTCGCAAAGAGCATTTAACCAACCATGTCAGAATACACACTGGAGAGACTCCCTATCGGTGCACGTATTGTGAGAAGAAATTTACCCGAAAAGAACGTTTAACGTATCACATAAGGTGA
- Protein Sequence
- MVHPAHSGSGGHHPPPPPTQGPPQSAHPPPPQPIPIVKPEFKVPPIPAHLMDVRGPDGSLVKINMPEHHDPSKPPNNVEMLKVNIEDLSQFLSYHEVFGKLPSDMLTGPSASLVPSSSTNTATTSAHSNGKLNHIRPGPTGESPFKCSYCAKSFTRKEHLTNHVRQHTGESPYRCPYCGKTFTRKEHLTNHVRLHTGETPYQCTYCGKKFTRKEHLTNHVRLHTGETPFQCTYCEKKFTRKEHLTNHTRLHTGETPFQCSYCQKKFTRKEHLTNHVRLHTGETPFQCSYCQKKFTRKEHLTYHVRLHTGETPFQCSYCQKKFTRKEHLTNHVRLHTGETPYQCTYCDKKFTRKEHLTNHVRIHTGETPYRCTYCEKKFTRKERLTYHIR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00101098;
- 90% Identity
- iTF_00099132;
- 80% Identity
- iTF_00104532;