Amel005139.1
Basic Information
- Insect
- Anopheles melas
- Gene Symbol
- SMARCC2
- Assembly
- GCA_000473525.2
- Location
- AXCO02013337.1:5026-8564[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.1 5e+03 -2.5 0.1 33 43 202 212 200 214 0.89 2 2 6e-15 5.9e-12 45.3 0.2 3 44 689 730 687 732 0.95
Sequence Information
- Coding Sequence
- ATGGAAATGGTGTCTCTGGGGCCGAAAAAGGATGGAAATCCTAATGCCGAATTCTTTACCGCGCCGGAAACACTGCAGAACTTCGAAACGGTGCGGCTGTGGTTGCAGAAACACTTCAAGAAGTTTCTTGCACCAGATCCACCGACAAAGGAATCTTTGGCTCATTTAATTATACAATTCATTCAGTATCAGGAAGCGAAGCTTGGGAAAAATTCTCAAGATCCACCAACAACGCGTTTACCGATACGATGCTTCATGGATTTCAAACCGGGCGGTGCCCTCTGCCACATACTTTCCACTATGTACCGCTACAAGGCGGAGCAGCGCTGGCGCAAGTTCGATTTCACCGTCAACAAAAACCCGATGCGCAAAGACCCGATCGGGCAGATGGTGCTGGACATCGAGACGGCACTGATCGAGGCGGAATGCATGCGCCTGCCAATCGTGTACATCCGCCCGGAGGTGGACCGTGCGACGGCGAACAAAATCACCGACATCGTGACGAACCATCAGGGCGAAATAACGGCCGATGAGGAGGAGGCCACGCACATCATCTATCCGGTGATTGATCCGCTGCCGGAGGACTACGCGCGGCCCACGTTCCGGCGCGATAAGCACGTGATGATCCACTGGTACTACTTCCCGGAGTCGTACGACACTTGGGTGCCGAATTCGTTTGACCTGCCCGACAACATCCCGGAGAGTCCACCGTCGCCGGCCGAGCGCTGGCGCGTGTCCGCCTCGTGGGTGATCGATCTGGACGAGTACAACGAGTGGATGTCAGAGGAGGACTACGAGGTGGACGAGGGGGGGCGCAAGAAGGTGCACCCGCACCGGCTTGGCGTCGAGGATTTGATCTCGAGCGTAGCCGGCGGCGGTGGCGGTGGGGCCGGCTCGGAAGATAAGGTTAAGAAAACGCCCAAGGTGGTCAACTCGAAGCGTAAACGGTCGCCCTCGCCGGCTGCCGGCAAGGGTGGCAAGCGAAAGAGCTACCGTTCGCCGGCCGCTTCGTCCGCAGCCTCCTCCTTCCAGAAGAAGCCGCGCGCGGATGACGAGGAGTCGGAGGATCTCACCAAGGACATGGAGGATCCGGCGCCGGAAACGAACATTACCGAGGTGAAGCCGAACATGGGCAGCTCGGGCGCGTCGGGCCCGGCAACGCCGCAGCCCAAGCGCGACCCGGACATGATGCCGATGAAGTACGCCACCGTGACCGATCTGGACGACGAGATGGGCATGAATGCGGGCGGCGCTGGTGGCAGTGGTGCGGGCGGTGGCGGTGGCAGCGGCGGATCCGGAGCGGGCGTGGGTGGTGGCGACGACAGCCAGGCGGGCAAGACGAGCGACAGCAGCAACACGCAGGACTTCCCGACCGGCAGCAAGGACGATCTGGAGGACAACGTGACGGAACAGACGCACCACATCATCGTGCCGTCCTACTCGGCCTGGTTCGACTACAACTCCATCCACGTGGTGGAGAAGCGCGCCCTGCCCGAGTTCTTCAACGGGAAGAACAAGTCGAAGACGCCCGAAATTTACATGGCCTACCGGAACTTCATGATCGACACGTACCGGCTCAATCCGACCGAGTATCTGACCAGCACGGCCTGTCGCCGCAATCTGGCCGGCGACGTGTGCGCGATCATGCGCGTGCACGCGTTCCTCGAGCAGTGGGGCCTGATCAACTATCAGATCGATGCCGATTCCCGGCCGACGCCGATGGGCCCACCGCCGACCTCCCACTTCCACGTGCTGAGCGACACGCCGTCCGGGCTGCAGCCGATCAATCCGCCCAAGACGGCGCAACCGTCCGCGGCGAAGAATTTGCTCGACCTGGACAAGAAGGGGGCCGTGCTGGGCGAGAAGAAGGACGAGCTGGCACCGGGTGCGGCGGCGGCGGGCGCTAACGGTGGTGCCGCGCCACTGATCGGCCCGGACGGCATCAAGGTGGAGCAGGGTCTCGTGCCAACGGCCGACCCGAACGGCCAGTTCGGCCTGCGGTTGGACCAGTACGCGAAGAAACCGGCCGCGATGCGCAACAAGACGGCGGCCAGCATGACGCGCGAGTGGACGGAGCAGGAGACGCTGCTGCTGCTCGAGGGGCTGGAGATGTACAAGGACGATTGGAACAAGGTGTGCGAGCATGTCGGGTCGCGCACGCAGGACGAGTGCATCCTGCACTTTCTGCGGCTGCCGATCGAGGATCCGTACCTGGAGGATGACAACACGTTCCTCGGTCCGCTCTCGTACCAGCCGATCCCGTTCAGCAAGGCGGGCAACCCGATCATGTCGACCGTGGCGTTTTTGGCCTCGGTGGTCGACCCGCGTATCGCGGCCAGCGCGGCCAAGGCGGCGATGGAAGAGTTTGCCGCAATCAAGGATGAGGTGCCCGCTTCCATGATGGACGCACACCTGAAGAACGTGGAGAAATCGAGCTTCGGTGGAAAGTTCGATCCGAATGCGGGGCTGGCAAGCAGTGGTATTGCTGGCACGGGCGCCGAAAAGGACAAGGAGGACGAGTCGGCGGACGGCAAAACACCGGCAAGCGGTGGAGCGTCCTCGGCAACGTCCGCTGCTGCAGGTGGTTCCGGGGCAGCAACAGCGGCCGCTGCGTCGACCCCTGCCACTCCGAACCCGCCAGCTGGCGACGTGGAGATGAAGGATGTTTCGAAGAAGGATGATGCTACCGGTAAGTTGCAATCGGTTCAATCTAGTTGGCTTGTAGCAACGTGCAACCAAATCGGTCTAGTGCTGCTTAGATC
- Protein Sequence
- MEMVSLGPKKDGNPNAEFFTAPETLQNFETVRLWLQKHFKKFLAPDPPTKESLAHLIIQFIQYQEAKLGKNSQDPPTTRLPIRCFMDFKPGGALCHILSTMYRYKAEQRWRKFDFTVNKNPMRKDPIGQMVLDIETALIEAECMRLPIVYIRPEVDRATANKITDIVTNHQGEITADEEEATHIIYPVIDPLPEDYARPTFRRDKHVMIHWYYFPESYDTWVPNSFDLPDNIPESPPSPAERWRVSASWVIDLDEYNEWMSEEDYEVDEGGRKKVHPHRLGVEDLISSVAGGGGGGAGSEDKVKKTPKVVNSKRKRSPSPAAGKGGKRKSYRSPAASSAASSFQKKPRADDEESEDLTKDMEDPAPETNITEVKPNMGSSGASGPATPQPKRDPDMMPMKYATVTDLDDEMGMNAGGAGGSGAGGGGGSGGSGAGVGGGDDSQAGKTSDSSNTQDFPTGSKDDLEDNVTEQTHHIIVPSYSAWFDYNSIHVVEKRALPEFFNGKNKSKTPEIYMAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDADSRPTPMGPPPTSHFHVLSDTPSGLQPINPPKTAQPSAAKNLLDLDKKGAVLGEKKDELAPGAAAAGANGGAAPLIGPDGIKVEQGLVPTADPNGQFGLRLDQYAKKPAAMRNKTAASMTREWTEQETLLLLEGLEMYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDDNTFLGPLSYQPIPFSKAGNPIMSTVAFLASVVDPRIAASAAKAAMEEFAAIKDEVPASMMDAHLKNVEKSSFGGKFDPNAGLASSGIAGTGAEKDKEDESADGKTPASGGASSATSAAAGGSGAATAAAASTPATPNPPAGDVEMKDVSKKDDATGKLQSVQSSWLVATCNQIGLVLLR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00106349;
- 90% Identity
- -
- 80% Identity
- -