Amel003367.1
Basic Information
- Insect
- Anopheles melas
- Gene Symbol
- -
- Assembly
- GCA_000473525.2
- Location
- KI923885.1:4854-6123[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 5.7e-06 0.0082 15.7 0.1 5 35 58 88 57 96 0.90 2 4 0.017 24 4.6 0.0 6 26 153 173 151 184 0.90 3 4 2.4e-08 3.4e-05 23.3 0.0 6 38 244 275 240 280 0.90 4 4 3e-13 4.2e-10 39.0 0.1 2 35 380 414 379 422 0.90
Sequence Information
- Coding Sequence
- GAGGAGGAGGAGGAGGAGGGTGATAAAAGTGACGCGGGCGAGGACAGCTCGATGGACGACAGCACGGACAGCGAGCAGGATGTTCAGCGGTGGATGGCGCTGGTGAAGGAGGTTGCAGTGGTCGACACGAGCCACCCGGGAGCGCCGAACTTCACGCCCTACCAGAACTGTCTGAAGCAGGCCATCGTAGCGGTCATTAGCGGGAATGTTTCGCCCAGAAGAGTGGCCGCCCGGTACAACGTACCCGCGAGCAGGCTGGTGCGCTGGACGCAGAAGGTAAAGCGAGCGATGAAAAAGCAACCAGAGACGGTAACTGCCAATGTGGCGCAGCTGGTTGCCGCATACATTGACCGGAGCATACAGGAGTTCAAGCAGCTGCTAGAAACGAGCGATGCGGACGCACGTGTCAGCTTGCTGAGCGACCCATCAAATGCGCTGATGTACGACGTGCGGATTATGCTCGCGATCCACGACATCATGTACACCGGGATAAGCCTGCGGGAGGCGGTATCGCGGTACAAAACCAGCCTCGGTTTGCTGAGAAACCGGCTGTACAATCTAAAGAGTCAGCTAATAACGAACCATTTTAAGTCGTTCGGCATCAGATTGAAAAGTGCGGACAAACAGACAAACGAGCGAAAGGTGGCAGGGGCGAAGCGTCGAAGGTTTGAGACGGAGTCGGGGAAGATTTTGAAAACAGCCGATCCCTCCCGGTACGAGGAGTGTGTGGCCAAAGCGCTGGAGGCGATTGGTTGCGGTCTATCTATCCAGCAAGCCGCAAACCACTTTCGCATACACAAAAGTGCTCTGTGGCGGCACGCAAAGGCCGAGAACATAACCTTTCCGCAGGAAAGGACAGTTATAAGGAAGAAAGCAGCGACAAAAAAAGTTAAACCGAGCGGTGGCGGTTCGATCGCTGCCTCCTTCACTACTACGAACAGTTGCCCCATAGTGCCGAAGCTGGTACCGTTTGGAAGCACTGGAGCCGTCACCACCGCCGAGCGCGTTAGGGATCGTGCAGGAGGTGGTGAGATCGCTCTAGCACCGGCTAGTACGGCGGCTCCTCCGATTGCTGCGCCGAGTTTGCTTCCCCTGCCCAAGTTGGTTCCGATTTCGAGCAGCTCACTGCCGGAGTACGAGGAGCGGATGGAGGCAGCAATCGCTATGATATCGAATCAGAAAATGAGCTACCGGGAAGCGTCGGTAAAGTACAACATTCCCAAGGCGACACTGTGGAAGAAGATAAGTAAGATGGAGCCGAAAAAGTAA
- Protein Sequence
- EEEEEEGDKSDAGEDSSMDDSTDSEQDVQRWMALVKEVAVVDTSHPGAPNFTPYQNCLKQAIVAVISGNVSPRRVAARYNVPASRLVRWTQKVKRAMKKQPETVTANVAQLVAAYIDRSIQEFKQLLETSDADARVSLLSDPSNALMYDVRIMLAIHDIMYTGISLREAVSRYKTSLGLLRNRLYNLKSQLITNHFKSFGIRLKSADKQTNERKVAGAKRRRFETESGKILKTADPSRYEECVAKALEAIGCGLSIQQAANHFRIHKSALWRHAKAENITFPQERTVIRKKAATKKVKPSGGGSIAASFTTTNSCPIVPKLVPFGSTGAVTTAERVRDRAGGGEIALAPASTAAPPIAAPSLLPLPKLVPISSSSLPEYEERMEAAIAMISNQKMSYREASVKYNIPKATLWKKISKMEPKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -