Basic Information

Insect: Anopheles maculipalpis
Gene Symbol: -
Assembly: GCA_943734865.1
Location: CALSEK010000159.1:815864-817931[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 8.6 4.6e+02 1.4 0.1 2 7 35 40 34 56 0.82

2 8 0.00079 0.042 14.1 0.5 3 23 140 161 139 161 0.95

3 8 2e-06 0.00011 22.3 2.8 1 23 180 203 180 203 0.97

4 8 2.4e-05 0.0013 18.9 2.3 2 23 346 367 345 367 0.96

5 8 0.00071 0.038 14.3 6.9 1 23 373 395 373 395 0.98

6 8 5.4e-05 0.0029 17.8 3.2 1 23 401 423 401 423 0.97

7 8 1.3e-05 0.00071 19.7 2.4 1 23 429 451 429 451 0.97

8 8 0.0036 0.19 12.1 4.3 1 20 457 476 457 477 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	8.6	4.6e+02	1.4	0.1	2	7	35	40	34	56	0.82
2	8	0.00079	0.042	14.1	0.5	3	23	140	161	139	161	0.95
3	8	2e-06	0.00011	22.3	2.8	1	23	180	203	180	203	0.97
4	8	2.4e-05	0.0013	18.9	2.3	2	23	346	367	345	367	0.96
5	8	0.00071	0.038	14.3	6.9	1	23	373	395	373	395	0.98
6	8	5.4e-05	0.0029	17.8	3.2	1	23	401	423	401	423	0.97
7	8	1.3e-05	0.00071	19.7	2.4	1	23	429	451	429	451	0.97
8	8	0.0036	0.19	12.1	4.3	1	20	457	476	457	477	0.94

Sequence Information

Coding Sequence: ATGTGCACTAAAAGTTTATCGTGCATTCTGTGTGGACAGCCAAATTTCCCAAACATCGATGCACTGCGCGTTAGTTTACTGAAAGTGACGGCACGTCCGCTGAAATGTCCGATCTGTGGTGATGAGCTGCTCGGTTTGGACAAGCTTACGATCCACCTGTTCGGCCATTCGTTGCTTGAGGATCAACAGAGCGATCAGTCGGCGCCACCGATCCAGACGATGGCGAATGATGAAGTTACCAGGGCCAATAGTAATACAACCTTTGCCTCGAGCTCGTTTAAAACGCTTCGCAAGGTGCGTAAAAAGGTAACGCTCGAAACGGAAGTGAAGCACCCGAGCGGTGTTGACGGCAGTCAGGCAGGGAAAGTGTCGCCAGCGTTTGAAAATAGCCAGAACGTCTCCTCCAACGCAAACCACTGTTCCGAGTGTGATGTCGCATTTCGTAACGCGGCACTGCTCAAAATGCACCGGGAGGTTTTCCACGACAGTAGCAACATCGTGCCCGGAACGGGACGGGACGGTGCATTCGATAAGCGCTTTCACTGTCACATCTGTCCGAAGGAGTTTAAAATGAAGGGATCACTCAAGATACACATGCGTGTGGTGCATGATGCCGGTTCGAAGAAGATCTGCTTGGAGCCTACTGCTCCTCGAGCAACCACAGACACCATGATGACAGCGAGTGTATCTGACCAAACCACACCCAGAGAAGTCTCTGTGGATAGTCGGGCTACATTGGTGCCGTTGCCGATGATCAATCCACAGCCAAATTTAGCTCTCTTTCAATCGAAGGACCTGAATGCGTCGCAACTTGCTCCGGAAGCTCACATCATTCAAATTATCGATCCTCGACAGCTTGCACAAGTAGTGTATCTTCCACCGAACAATACCTCCCAGCAGGTTAGTCTTCCTTCACACACGATTGTGCAGGATGCAGGAATGTCTCCGCAGCAAGGAAGGGATAGTTTTTCGCTGCCCTCATCTCCCCAACAGCAGCAGCAGCAGCAGCAAGGACATGAAAATGCCAAGCAATGGGAGTGTGATGTTTGTCGAAAATCTTTCACTACCAAGTACTTTCTCAAGAAGCACAATCGTCTACACACAGGGGAGATGCCGTACACCTGTGGGATCTGCCACAAATCTTTCACCTTTCAGCAATCCTACCACAAGCATCTGCTTTACCACAGCGATGAAAAGCCGCACGTGTGCTCGGTATGCAATCGTGCCTTCAAGGAACTATCCACGCTACACAACCATCAACGCATACATTCCGGTGAAAAGCCATTTGCCTGCGAAACATGTGGTAAATGTTTCCGGCAGCGTGTATCGTACCTGGTTCACCGACGGATACACACCGGACTGATGCCGTACAAGTGTTCCGGGTGTGACAAAAGCTTCCGCTACAAGGTGTCCCAACGCACCCACAAATGTCCGGCGAGCCCTCCCGGAACGGTGATGCGTAAAACGGGAGATCTTTTGCAGAAATTACTTCAATCATCGTCCATTCTTCCGGAAAGTTCTTGCACGCCGCAGCAGGAGGATAAGGAAACAATATTTATGACAGATGATGGTCCACTATGCAATCCGATCGGCGAACCTACGGAGGAAGATGTGAAACAGACGGCGGATTATGTGAACCGCACCCTAGATGAGCTGGTGAAGGGATCGTACGATAAGCTCGATATCGGGAACGCTACGACGTCCTCCCTGCTGTACGATCATCAACTCCAATCTCAACAATTGTACGGTGACCCAGGGATGGCTAATCTGCTGCGCCCATTATCAGACCAACCGCAACCGCAGTCGTCGGGTGGCAGTGAACCAAATTTTCCCCGCATCGAAAGTTTGTGTCTTCTCTCGCCGAGTGCTTTCGACGGTGGTCAACTGGAAGATTTGGAAGGACTCAAGCTAGATAATGGTTGGTGA
Protein Sequence: MCTKSLSCILCGQPNFPNIDALRVSLLKVTARPLKCPICGDELLGLDKLTIHLFGHSLLEDQQSDQSAPPIQTMANDEVTRANSNTTFASSSFKTLRKVRKKVTLETEVKHPSGVDGSQAGKVSPAFENSQNVSSNANHCSECDVAFRNAALLKMHREVFHDSSNIVPGTGRDGAFDKRFHCHICPKEFKMKGSLKIHMRVVHDAGSKKICLEPTAPRATTDTMMTASVSDQTTPREVSVDSRATLVPLPMINPQPNLALFQSKDLNASQLAPEAHIIQIIDPRQLAQVVYLPPNNTSQQVSLPSHTIVQDAGMSPQQGRDSFSLPSSPQQQQQQQQGHENAKQWECDVCRKSFTTKYFLKKHNRLHTGEMPYTCGICHKSFTFQQSYHKHLLYHSDEKPHVCSVCNRAFKELSTLHNHQRIHSGEKPFACETCGKCFRQRVSYLVHRRIHTGLMPYKCSGCDKSFRYKVSQRTHKCPASPPGTVMRKTGDLLQKLLQSSSILPESSCTPQQEDKETIFMTDDGPLCNPIGEPTEEDVKQTADYVNRTLDELVKGSYDKLDIGNATTSSLLYDHQLQSQQLYGDPGMANLLRPLSDQPQPQSSGGSEPNFPRIESLCLLSPSAFDGGQLEDLEGLKLDNGW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00108640;
90% Identity: -
80% Identity: -