Basic Information

Gene Symbol
mybM_1
Assembly
GCA_943734865.1
Location
CALSEK010000014.1:646675-650566[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 5 3.2 2.5e+03 -1.5 0.0 22 45 229 254 220 255 0.68
2 5 1.5e-11 1.2e-08 34.8 0.2 3 45 263 306 261 307 0.94
3 5 3.2e-11 2.5e-08 33.7 0.1 1 44 315 362 315 364 0.91
4 5 4.1e-08 3.3e-05 23.7 0.0 3 46 372 416 370 416 0.92
5 5 2.9e-07 0.00023 21.1 0.2 4 44 425 472 422 474 0.89

Sequence Information

Coding Sequence
ATGTCTAGTTTAAGCTCAGATTGCGAATCTTCATACTACACGGAATCGGAAGCCGAAAGTGACTACGTTACTCATGAGGAGGGACAATCGGTACAGTACAATCACACCCTCGAGGTGGAAGATATTATACGCAAGCATGTGGACATTACGACCAAAAATGCCATTGGTCTTAACCATCAGTACAAAGCGAAGTTACTCTTCCTGCGGCAACAGTTAGAAGGGTTGCTTTCACGCTGCCAACATAGGTTGCATGAGGTTGACAAAAGTCTGGATGATATTCGATTGAATTTAACGCCCAGGTCGCGACCTACTCGACCACGCCATCCGGGttacatctgtgggcaaccgttcttcaaggatcacgaactttatcctggtccgcacaatgaggactatctgtaccgaaagaacgtcaagaaggaattttttccccttgatttgtttgaatcgattgaaacgttttggacgcgcaaggacaagCAGATGCTACGGGAAAGCATAGCGTCCCAGGCATACGAATTCGTACGCCGGGAAAACCAACTGCGTGATAAAATGTGCATCAGGTCGGAAAATGCGAGGCGAATAATAAAGGAAAGGATCGAATTAAAATCTCTACCATTGGCAGAAATTTGGCACAGAGCGCTTGCTTATGATGGTAAGTTTGGAGGCCAAAAGTTTACTGTGGACTGGCTAAAAATATCGGCCGCCATCATGGCCGGACGCCATTCAGCATTCACTTGCGAGAGCATGTGGAACAACTTTCTAATGCCCGGCCTGAAACGATGCCTATGGACATCGGACGAAGAATCGAAGCTGGTTGCGGCAGTAGAAGCACACAAGCGCTGCAACTGGAAATTGATAGCGCTCAGCGTGGAAAATCGCTCCGAGTATCAGTGTTTCGTGCACTATCAGACGAACTTTTCTGAGATATCCCAGATTAAAAGGAATCCCTGGACGCCGGAAGAGGATGAACTGTTGCTACGCCTAGTTAACGAAAACCGAATTGGAAGCAATATCATATGGAACAAAATAGTGGAACGTATACCGTTTCGAAACAAGGTGCAAGTATACCAACGCTACAAATACACGCTTTTGCGTCCGCTCCGAGGTGCCAAATTTACCGCCgaagaagactgtgtcattactgcgtacgtgcagcagtatggtgatgatttccgatacttcccggacgatctgctgccgggcAGGACGACGAAACAGATACGGGCTCGATACATGAACACATTGCGCTTCGTCAACACGCACGTAGGCTGGAGCCTGGAAGAGGACAAGCGTCTGATGAGCTACATCGCCGAACATCTGACCGAGGAAGGTGCGCAAAAGATTTCGTGGGCCGACTGCTCCAAATATCTTGGCAACCATTCGCGGCTCAGTTGCCGCACACGGTACTACACCATCGAAAAGTTCCTCGAGCGCCATCCGAACGCGACGCTCGAGAATGTTCCGAGAAGGGAGAAAAAAAGGCTTTCCTCCAATGTGACGGACAAGAATTGGATTAAAACGATTGTAGAAATCAAAAGCACCCCAAGGATGGCACAGAAACCTTCGGGTGAACCGTTCGAGTTCGGCAGATCGTCGGGGATCGAGTGCGGATTGCACGAACAGATGAAGTTCAGTTTTCGTTACAAGTTCGGTTACAAGATGGACGTCGACGCCAAACACAATCACGTGTTTATGGGGGCAAAAATCATGCTCTATCTTTTGGAAGGTTTTCAAGAGCTTTCGTCCGTTCAAGAGCTATCCATCGCCCCGGGTGGCGTACCGAACCATGAAGCACTATTTAAGGCAATACGGCAATGTCCTCTCGATTGGCCCAATCTTGTATCGATGATGCGTCCCAAGATGACACTCTCGGGGGATGCGATGCTCTTTTGCCGCATTCCTCCCAGCTACAACACCGTGCTGGGTTTGCGGGGTGTATGCCTGAACGCTTGCAGCGAACATTTGAAGCAAACGTTACCCGAACAAAAGGCGAAAAAAGTTCGCCAGAGTTTTGACTCGGCCACGTACGATCAGGCGCTAGGAGTGTTTGTTGAGCGCTTCCGTAAGATATTCCACTGGACCATGCTTCTTATGATGCTAAACATCGACGATATAACGCTCGACAGTGGAGAACAATCGTGCCATGAACGGAACGACAATCCGATAACGGACAGTGGAAAATGTAGCCAAAATACCAACACTGATCTGCAGCTCAAATCGATGGAAAACCTCATCATACCGGTGGGGACGGATAAACTATCGAACTTATCGTACTGCACTTCGTTGCCTAAAGGCACGTCCCTGCCAATTGTTAATGATAACAGAAACAACATCGTTGCAAGCATAACCATCATCGATCCAAAGGATCTTCCGGCCGTGCCGGGCTATAATTGCACAGCCAATGTTCCGAGGCAGGAAACGGAGTTCAAATGTCAACAGTATTTATCCAAACCGCTAGTAACATCGGCAGCTGGTGTTGCAGCGCCAGAAACAGGTAGCAATCTATTGCAATCTAATTCTACACCAATCGAGTCGATCCTTCCCATAATACCTGCGAATAATGTAAAGCAATCTGAAGCGGAACAACCAAATCCTTCCATGGATCCCTCACCGGGAAGTACCCTTCTCGGCACGGATACCAGTATGCTACCAAATACGATCCCATTTACTATTATCCAAGTGCCAGAGGAAATATCTTTCGTGCAACAGCGCCTGGTGAACGCTGTGGCTAACATTACCTCTCCCGAAGAAGCGCTTCCAAGTGTTAAACGTGATACACAGCAAGTATTTGATAGTACTAGTAATTTTTTGGAAGAACAAGCAGATGTTAAAATGAGGGCGATTGATGAGCCACAGTGTCCCAAACAGCTTAACGAATCCGGCAAAATCCTGTGCACGTTTAGCGAAATAGTCACTCAAACTAATGAAGCGCCATTTAAACTTAGCGAAGTGACACTAGCACACGAAATGCAGAAAATAAAACATGTGCTTTGCAAAGAGGATGTGACCTGTAGTCCCGTAACAACGACTAACAAAGATACTGTGATGGTCGATAGTAACTATCAACCTACCGAAGATTCGATTCGAAACACCGACTCTGATGAAGGTAACGAAAAGCAAAACCAACGATATTTAGCAGCAATACCACCGATCGATAGCACGTTGGTCCCATGCGATAGGAATACATTCGAGGGAGGCTTGCTGGCGCATAACACTGTCGATGTTCAATCTCGCGAAGAAGCAACAGTCGGTTCGCCAGCAACTCAAAAGAATTGTGGACAGTCTGGTGATCATCTCATCACAGTAGTTAGAATGAAACCGCTCCATCAGATTGAAAAAGACAACGAGAAGCACAAAACTGAAGTTCCATCAACAGACGATAAAGCGTTCGTGGAAGCGCATCGTATGGACTGCGAAATAGCCTCCGAGGTGCAGTCGAACGATCGTAGCCCAAATCTGTTGATCGACGTAGACGAACCGCTTACCGCTGTTGATATAATCCGAATGTTACGCTCCCGGCGCAACGCACATCAGTACGAAGACGACAGCGACAATGAGCAGGAATTTTCGCATTTACCAAATGACTGA
Protein Sequence
MSSLSSDCESSYYTESEAESDYVTHEEGQSVQYNHTLEVEDIIRKHVDITTKNAIGLNHQYKAKLLFLRQQLEGLLSRCQHRLHEVDKSLDDIRLNLTPRSRPTRPRHPGYICGQPFFKDHELYPGPHNEDYLYRKNVKKEFFPLDLFESIETFWTRKDKQMLRESIASQAYEFVRRENQLRDKMCIRSENARRIIKERIELKSLPLAEIWHRALAYDGKFGGQKFTVDWLKISAAIMAGRHSAFTCESMWNNFLMPGLKRCLWTSDEESKLVAAVEAHKRCNWKLIALSVENRSEYQCFVHYQTNFSEISQIKRNPWTPEEDELLLRLVNENRIGSNIIWNKIVERIPFRNKVQVYQRYKYTLLRPLRGAKFTAEEDCVITAYVQQYGDDFRYFPDDLLPGRTTKQIRARYMNTLRFVNTHVGWSLEEDKRLMSYIAEHLTEEGAQKISWADCSKYLGNHSRLSCRTRYYTIEKFLERHPNATLENVPRREKKRLSSNVTDKNWIKTIVEIKSTPRMAQKPSGEPFEFGRSSGIECGLHEQMKFSFRYKFGYKMDVDAKHNHVFMGAKIMLYLLEGFQELSSVQELSIAPGGVPNHEALFKAIRQCPLDWPNLVSMMRPKMTLSGDAMLFCRIPPSYNTVLGLRGVCLNACSEHLKQTLPEQKAKKVRQSFDSATYDQALGVFVERFRKIFHWTMLLMMLNIDDITLDSGEQSCHERNDNPITDSGKCSQNTNTDLQLKSMENLIIPVGTDKLSNLSYCTSLPKGTSLPIVNDNRNNIVASITIIDPKDLPAVPGYNCTANVPRQETEFKCQQYLSKPLVTSAAGVAAPETGSNLLQSNSTPIESILPIIPANNVKQSEAEQPNPSMDPSPGSTLLGTDTSMLPNTIPFTIIQVPEEISFVQQRLVNAVANITSPEEALPSVKRDTQQVFDSTSNFLEEQADVKMRAIDEPQCPKQLNESGKILCTFSEIVTQTNEAPFKLSEVTLAHEMQKIKHVLCKEDVTCSPVTTTNKDTVMVDSNYQPTEDSIRNTDSDEGNEKQNQRYLAAIPPIDSTLVPCDRNTFEGGLLAHNTVDVQSREEATVGSPATQKNCGQSGDHLITVVRMKPLHQIEKDNEKHKTEVPSTDDKAFVEAHRMDCEIASEVQSNDRSPNLLIDVDEPLTAVDIIRMLRSRRNAHQYEDDSDNEQEFSHLPND

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-