Amac011791.1
Basic Information
- Insect
- Anopheles maculipalpis
- Gene Symbol
- -
- Assembly
- GCA_943734865.1
- Location
- CALSEK010000220.1:270121-272528[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.38 6.7e+02 -0.1 0.1 2 16 138 152 137 160 0.79 2 4 1.6e-09 2.8e-06 26.7 0.1 2 35 232 266 231 270 0.91 3 4 0.0046 8.1 6.1 0.0 23 35 302 314 302 322 0.84 4 4 9.9e-11 1.8e-07 30.6 0.1 4 38 343 377 341 381 0.93
Sequence Information
- Coding Sequence
- ATGGCAAACAAATCATGCGTGACGTGGATAAACTTCTCCGAGCATATGATGCATGTTTACGAGGAAATGCTCACTTCGCACCAGTACAACGATTGTCGATTGATCGTGTCCGACGGTGAGCTGCATGCAAACCGGACCATCCTCTGCATGGCATCACCATTCTTCGAGCTCATCTTTGCCCGCACCGTACATATGGCTGCGGACTGCCACACGGTGCTGATTCCGGACGTGAAGCTGTCGCCTTTACGGTTCGTTTTGCAGTTCATCCATACCGGATCAGTTAATTTACTGCCGTACGATGTGGCACCGTTTGTGGACCTTTGCAGCTTACTTCAGATACGTGGCGTACAGTATGCTCAAGATCGTGTCGTGGGAATTAATTTCGGAACCGCTGCCTGCTGTTCCGTGCGGGAAGATTCGATCGCTAACGCTGCACAAGACTGTAGACAGGAGCAAGGACAACAACAGTACGCTGCGATACAGGACATGAACGGGAGGCATGATAATTGGTCGACCGAGTATGGGATTGAAAATGACGATAGTAATGAACCGGAACCGGAACTCGCACAGCACGTACCACCGGAAGGGATTTACTCGCTGGAATATGGTGGTACCGATTGCAGTTTAAAAGCGGAAAACCGACCGAATGCGGATCCACCGCCGGACGAACAGCCAGCCGACCCATCCAGCTACGAAACCCGCCTCAGTGCAGCTATCGATGCAGTATTAACTCAAGGTATAAGCTACCGTCTAGCATCCAAACGGTACAACATCGCTAAAACGGTACTGTGGCGAAAAACGATGAAAATGCCCCGACCGATCCGATCGAGCTCGCCGAAACTTGGCAACCAGCGCCGGGAGGCGATCGATGCGCTGAAAACGGGCGAAAAGTTAGTTTACGTTAGTCAACGGTTCGATATTCCCCTATCGACGCTGCACCGGGACAAGATACGGCTGTACAACAAGGGAATATTGCCAGGCAAGGTAACGCTGGCACAGCGCGATAAGGGTGAATCGTTTCGTCAACGGTTAACGGAATCGGTAAACGAATGCATTGCTGGACGTATGTCGCTTTCGGAGGCGGCACGCGTCTACAAACTACCGAAGACGACTATATGGCGAAGAGTTCGTATATCGCAAGCAAACAACAGTTGTCTGGAAGCGAAAGAAGTGGAGCGAAACCTAGCGAAGGAACATTCCGTAGAAAGCTGCATGGTAGGAAGTGTGGACCTTTCGATAGAAGGTCGGCAAAGTGAATCGTTGCGTGTCGGAGAAGAATTCGTGTCCGATCAGAATATTCAGGATATTACTGGCATAGAACTAGTTGATGATTCAACTATTCTCTAG
- Protein Sequence
- MANKSCVTWINFSEHMMHVYEEMLTSHQYNDCRLIVSDGELHANRTILCMASPFFELIFARTVHMAADCHTVLIPDVKLSPLRFVLQFIHTGSVNLLPYDVAPFVDLCSLLQIRGVQYAQDRVVGINFGTAACCSVREDSIANAAQDCRQEQGQQQYAAIQDMNGRHDNWSTEYGIENDDSNEPEPELAQHVPPEGIYSLEYGGTDCSLKAENRPNADPPPDEQPADPSSYETRLSAAIDAVLTQGISYRLASKRYNIAKTVLWRKTMKMPRPIRSSSPKLGNQRREAIDALKTGEKLVYVSQRFDIPLSTLHRDKIRLYNKGILPGKVTLAQRDKGESFRQRLTESVNECIAGRMSLSEAARVYKLPKTTIWRRVRISQANNSCLEAKEVERNLAKEHSVESCMVGSVDLSIEGRQSESLRVGEEFVSDQNIQDITGIELVDDSTIL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00103793;
- 90% Identity
- iTF_00103793;
- 80% Identity
- iTF_00103793;